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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:decreased cochlea coiling
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Accession:MP:0003148 term browser browse the term
Definition:a reduction in cochlear coiling or number of turns; in wild-type mice, the cochlea most commonly exhibits one and three-fourth turns
Synonyms:exact_synonym: reduced cochlear coiling
 broad_synonym: Abnormal cochlea morphology
 xref: HP:0000375


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decreased cochlea coiling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:20736290 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 IAGP MGI PMID:16495313 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134 		JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085 		JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10072433 PMID:16916509 PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459 		JBrowse link
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:17855431 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173 		JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16410827 PMID:16495313 PMID:20736290 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:11135239 PMID:23666531 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gbx2 gastrulation brain homeobox 2 IAGP MGI PMID:15829521 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901 		JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:16410827 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Lmo4 LIM domain only 4 IAGP MGI PMID:19913004 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981 		JBrowse link
G Nog noggin IAGP MGI PMID:20063299 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:15242798 PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:5912439 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771 		JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 IAGP MGI PMID:10407036 PMID:23606368 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813 		JBrowse link
G Ror1 receptor tyrosine kinase-like orphan receptor 1 IAGP MGI PMID:27162350 NCBI chr 4:99,952,988...100,302,003
Ensembl chr 4:99,952,988...100,301,962 		JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:16916509 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Slc25a13 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 IAGP MGI PMID:29301908 NCBI chr 6:6,041,218...6,217,304
Ensembl chr 6:6,041,218...6,217,173 		JBrowse link
G Slc26a4 solute carrier family 26, member 4 IEA MGI NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968 		JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610 		JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:23986237 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 17096
    hearing/vestibular/ear phenotype 1012
      abnormal ear morphology 570
        abnormal inner ear morphology 354
          abnormal cochlea morphology 284
            decreased cochlea coiling 21
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