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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal soleus morphology
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Accession:MP:0003081 term browser browse the term
Definition:any structural anomaly of the superficial flat broad muscle of the calf that is responsible for plantar flexion of the foot


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abnormal soleus morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 IAGP MGI PMID:20022958 NCBI chr17:48,726,259...48,739,756
Ensembl chr17:48,726,259...48,739,958 		JBrowse link
G Capn3 calpain 3 IAGP MGI PMID:15138196 NCBI chr 2:120,294,074...120,335,400
Ensembl chr 2:120,294,053...120,335,399 		JBrowse link
G Chat choline O-acetyltransferase IAGP MGI PMID:24486622 NCBI chr14:32,130,160...32,187,866
Ensembl chr14:32,130,160...32,187,946 		JBrowse link
G Cmya5 cardiomyopathy associated 5 IAGP MGI PMID:34037836 NCBI chr13:93,177,221...93,281,278
Ensembl chr13:93,177,221...93,281,232 		JBrowse link
G Col13a1 collagen, type XIII, alpha 1 IAGP MGI PMID:28369367 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887 		JBrowse link
G Des desmin IAGP MGI PMID:25394388 NCBI chr 1:75,336,936...75,345,223
Ensembl chr 1:75,336,973...75,345,223 		JBrowse link
G Flnc filamin C, gamma IAGP MGI PMID:16914736 NCBI chr 6:29,433,150...29,461,888
Ensembl chr 6:29,433,255...29,461,882 		JBrowse link
G Foxj3 forkhead box J3 IAGP MGI PMID:19914232 NCBI chr 4:119,396,858...119,486,316
Ensembl chr 4:119,394,201...119,486,316 		JBrowse link
G Gas7 growth arrest specific 7 IAGP MGI PMID:22662195 NCBI chr11:67,344,083...67,579,818
Ensembl chr11:67,345,917...67,575,800 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:27907123 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336 		JBrowse link
G Itga7 integrin alpha 7 IAGP MGI PMID:9354797 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155 		JBrowse link
G Kbtbd13 kelch repeat and BTB (POZ) domain containing 13 IAGP MGI PMID:31671076 NCBI chr 9:65,295,965...65,299,000
Ensembl chr 9:65,295,966...65,298,934 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 IAGP MGI PMID:16111892 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Lmna lamin A IAGP MGI PMID:15548545 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IAGP MGI PMID:20008564 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140 		JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:29168801 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Myof myoferlin IAGP MGI PMID:16280346 NCBI chr19:37,887,484...38,032,025
Ensembl chr19:37,887,484...38,032,025 		JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IAGP MGI PMID:22078881 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367 		JBrowse link
G Plec plectin IAGP MGI PMID:18490514 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774 		JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle IAGP MGI PMID:22139840 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604 		JBrowse link
G Spin1 spindlin 1 IAGP MGI PMID:29168801 NCBI chr13:51,254,523...51,306,588
Ensembl chr13:51,254,916...51,306,582 		JBrowse link
G Tars3 threonyl-tRNA synthetase 3 IAGP MGI PMID:37059185 NCBI chr 7:65,294,610...65,341,841
Ensembl chr 7:65,294,646...65,341,839 		JBrowse link
G Ttn titin IAGP MGI PMID:20855473 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891 		JBrowse link
G Zfp106 zinc finger protein 106 IAGP MGI PMID:26604141 NCBI chr 2:120,337,303...120,394,345
Ensembl chr 2:120,337,301...120,394,324 		JBrowse link
decreased soleus weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 IAGP MGI PMID:20022958 NCBI chr17:48,726,259...48,739,756
Ensembl chr17:48,726,259...48,739,958 		JBrowse link
G Col13a1 collagen, type XIII, alpha 1 IAGP MGI PMID:28369367 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887 		JBrowse link
G Ifrd1 interferon-related developmental regulator 1 IAGP MGI PMID:15060170 NCBI chr12:40,253,128...40,273,184
Ensembl chr12:40,251,566...40,298,503 		JBrowse link
G Kbtbd13 kelch repeat and BTB (POZ) domain containing 13 IAGP MGI PMID:31671076 NCBI chr 9:65,295,965...65,299,000
Ensembl chr 9:65,295,966...65,298,934 		JBrowse link
G Ky kyphoscoliosis peptidase IAGP MGI PMID:7864091 NCBI chr 9:102,382,954...102,423,443
Ensembl chr 9:102,382,949...102,423,438 		JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 IAGP MGI PMID:11254352 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169 		JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha IAGP MGI PMID:15760270 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068 		JBrowse link
G Sacs sacsin IAGP MGI PMID:25260547 NCBI chr14:61,375,870...61,478,142
Ensembl chr14:61,375,906...61,478,144 		JBrowse link
G Selenon selenoprotein N IAGP MGI PMID:21858002 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477 		JBrowse link
G Ttn titin IAGP MGI PMID:24470489 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891 		JBrowse link
G Zfp106 zinc finger protein 106 IAGP MGI PMID:26604141 NCBI chr 2:120,337,303...120,394,345
Ensembl chr 2:120,337,301...120,394,324 		JBrowse link
increased soleus weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghr growth hormone receptor IAGP MGI PMID:23349524 NCBI chr15:3,347,237...3,612,834
Ensembl chr15:3,347,242...3,612,974 		JBrowse link
G Kbtbd13 kelch repeat and BTB (POZ) domain containing 13 IAGP MGI PMID:31671076 NCBI chr 9:65,295,965...65,299,000
Ensembl chr 9:65,295,966...65,298,934 		JBrowse link
G Sgca sarcoglycan, alpha (dystrophin-associated glycoprotein) IAGP MGI PMID:9744877 NCBI chr11:94,853,603...94,867,153
Ensembl chr11:94,853,617...94,867,153 		JBrowse link
G Sod1 superoxide dismutase 1, soluble IAGP MGI PMID:23729587 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217 		JBrowse link
G Stim1 stromal interaction molecule 1 IAGP MGI PMID:30576443 PMID:31666234 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17088
    limbs/digits/tail phenotype 1550
      abnormal limb morphology 1265
        abnormal limb muscle morphology 112
          abnormal soleus morphology 39
            abnormal soleus weight + 20
Path 2
Term Annotations click to browse term
  mammalian phenotype 17088
    muscle phenotype 1982
      abnormal muscle morphology 1465
        abnormal skeletal muscle morphology 662
          abnormal hypaxial muscle morphology 212
            abnormal limb muscle morphology 112
              abnormal soleus morphology 39
                abnormal soleus weight + 20
paths to the root