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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal olfactory bulb development
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Accession:MP:0002739 term browser browse the term
Definition:abnormality in the progression of the formation of the olfactory bulb



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abnormal olfactory bulb development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp3 caspase 3 IAGP MGI PMID:15156583 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724
JBrowse link
G Ccdc88a coiled coil domain containing 88A IAGP MGI PMID:21632933 NCBI chr11:29,323,521...29,460,808
Ensembl chr11:29,323,658...29,460,808
JBrowse link
G Cdk5 cyclin dependent kinase 5 IAGP MGI PMID:11517264 PMID:15067135 NCBI chr 5:24,612,595...24,628,737
Ensembl chr 5:24,623,239...24,628,528
JBrowse link
G Cdk5r1 cyclin dependent kinase 5, regulatory subunit 1 IAGP MGI PMID:9010203 PMID:11517264 NCBI chr11:80,367,849...80,372,010
Ensembl chr11:80,367,849...80,372,010
JBrowse link
G Cdk5r2 cyclin dependent kinase 5, regulatory subunit 2 IAGP MGI PMID:11517264 NCBI chr 1:74,894,188...74,896,891
Ensembl chr 1:74,894,093...74,896,891
JBrowse link
G Dlx2 distal-less homeobox 2 IAGP MGI PMID:7590232 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098
JBrowse link
G Efna3 ephrin A3 IAGP MGI PMID:12914696 NCBI chr 3:89,221,200...89,231,359
Ensembl chr 3:89,221,206...89,230,272
JBrowse link
G Efna5 ephrin A5 IAGP MGI PMID:12914696 NCBI chr17:62,909,949...63,188,431
Ensembl chr17:62,911,179...63,188,312
JBrowse link
G Emx1 empty spiracles homeobox 1 IAGP MGI PMID:19709628 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
JBrowse link
G Fezf1 Fez family zinc finger 1 IAGP MGI PMID:16540508 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:17470284 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Foxj1 forkhead box J1 IAGP MGI PMID:19906869 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225
JBrowse link
G Gsx2 GS homeobox 2 IAGP MGI PMID:19709628 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554
JBrowse link
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 IAGP MGI PMID:21147989 NCBI chr13:117,738,856...118,117,564
Ensembl chr13:117,738,856...118,123,954
JBrowse link
G Nrp1 neuropilin 1 IAGP MGI PMID:27844052 NCBI chr 8:129,085,553...129,231,957
Ensembl chr 8:129,085,085...129,229,844
JBrowse link
G Or10a4 olfactory receptor family 10 subfamily A member 4 IAGP MGI PMID:8929536 NCBI chr 7:106,696,674...106,697,621
Ensembl chr 7:106,692,427...106,699,015
JBrowse link
G Or10j5 olfactory receptor family 10 subfamily J member 5 IAGP MGI PMID:18353676 NCBI chr 1:172,784,335...172,785,384
Ensembl chr 1:172,777,976...172,785,924
JBrowse link
G Or51e2 olfactory receptor family 51 subfamily E member 2 IAGP MGI PMID:19186165 NCBI chr 7:102,389,928...102,408,678
Ensembl chr 7:102,387,718...102,408,678
JBrowse link
G Or55b10 olfactory receptor family 55 subfamily B member 10 IAGP MGI PMID:19186165 NCBI chr 7:102,143,030...102,143,980
Ensembl chr 7:102,140,673...102,148,780
JBrowse link
G Or8a1 olfactory receptor family 8 subfamily A member 1 IAGP MGI PMID:15186782 PMID:18353676 PMID:24211702 PMID:27844052 NCBI chr 9:37,641,273...37,642,357
Ensembl chr 9:37,641,273...37,642,400
JBrowse link
G Or8a1b olfactory receptor family 8 subfamily A member 1B IAGP MGI PMID:15186782 PMID:21147989 NCBI chr 9:37,622,644...37,623,576
Ensembl chr 9:37,620,260...37,627,546
JBrowse link
G Plxnb2 plexin B2 IAGP MGI PMID:17554007 PMID:26579598 NCBI chr15:89,039,752...89,064,960
Ensembl chr15:89,039,752...89,064,991
JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 IAGP MGI PMID:11859196 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366
JBrowse link
G Pou3f3 POU domain, class 3, transcription factor 3 IAGP MGI PMID:11859196 NCBI chr 1:42,734,928...42,739,370
Ensembl chr 1:42,734,085...42,742,336
JBrowse link
G Prokr2 prokineticin receptor 2 IAGP MGI PMID:16537498 NCBI chr 2:132,211,625...132,227,413
Ensembl chr 2:132,179,653...132,227,367
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:31291551 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Rtp1 receptor transporter protein 1 IEA MGI NCBI chr16:23,247,883...23,252,710
Ensembl chr16:23,247,883...23,252,710
JBrowse link
G Sp8 trans-acting transcription factor 8 IAGP MGI PMID:17470284 NCBI chr12:118,809,968...118,816,313
Ensembl chr12:118,810,064...118,816,311
JBrowse link
G Tbr1 T-box brain transcription factor 1 IAGP MGI PMID:9883721 NCBI chr 2:61,633,228...61,644,458
Ensembl chr 2:61,633,274...61,644,458
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase IAGP MGI PMID:19323847 NCBI chr 3:81,865,719...81,883,035
Ensembl chr 3:81,864,397...81,883,509
JBrowse link
G Tfap2e transcription factor AP-2, epsilon IAGP MGI PMID:19580868 NCBI chr 4:126,609,796...126,630,062
Ensembl chr 4:126,609,799...126,630,033
JBrowse link
G Tshz1 teashirt zinc finger family member 1 IAGP MGI PMID:24487590 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831
JBrowse link
G Vax1 ventral anterior homeobox 1 IAGP MGI PMID:15590934 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Wdr11 WD repeat domain 11 IAGP MGI PMID:29263200 NCBI chr 7:129,193,373...129,237,462
Ensembl chr 7:129,193,587...129,237,462
JBrowse link
abnormal rostral migratory stream morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl1 achaete-scute family bHLH transcription factor 1 IAGP MGI PMID:19208224 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522
JBrowse link
G Ccdc88a coiled coil domain containing 88A IAGP MGI PMID:21632933 PMID:22974978 NCBI chr11:29,323,521...29,460,808
Ensembl chr11:29,323,658...29,460,808
JBrowse link
G Cckar cholecystokinin A receptor IAGP MGI PMID:18305161 NCBI chr 5:53,855,827...53,865,046
Ensembl chr 5:53,855,118...53,865,047
JBrowse link
G Dab1 disabled 1 IAGP MGI PMID:17494763 NCBI chr 4:103,476,425...104,602,041
Ensembl chr 4:103,476,556...104,602,041
JBrowse link
G Dcx doublecortin IAGP MGI PMID:16571605 NCBI chr  X:142,638,838...142,716,392
Ensembl chr  X:142,638,838...142,716,307
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12533617 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Fezf1 Fez family zinc finger 1 IAGP MGI PMID:16540508 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361
JBrowse link
G Foxj1 forkhead box J1 IAGP MGI PMID:21745638 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225
JBrowse link
G Gsx2 GS homeobox 2 IAGP MGI PMID:19208224 NCBI chr 5:75,236,262...75,238,554
Ensembl chr 5:75,236,262...75,238,554
JBrowse link
G Id2 inhibitor of DNA binding 2 IAGP MGI PMID:19109490 NCBI chr12:25,143,798...25,146,091
Ensembl chr12:25,143,798...25,147,139
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:17344408 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:16163386 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564
JBrowse link
G Lama2 laminin, alpha 2 IAGP MGI PMID:17344408 NCBI chr10:26,857,281...27,493,021
Ensembl chr10:26,856,032...27,495,754
JBrowse link
G Lama4 laminin, alpha 4 IAGP MGI PMID:17344408 NCBI chr10:38,841,511...38,986,184
Ensembl chr10:38,841,511...38,986,184
JBrowse link
G Lrp8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor IAGP MGI PMID:17494763 NCBI chr 4:107,659,337...107,734,037
Ensembl chr 4:107,659,066...107,734,037
JBrowse link
G Mrtfa myocardin related transcription factor A IAGP MGI PMID:20534669 NCBI chr15:80,896,482...81,074,937
Ensembl chr15:80,896,482...81,074,958
JBrowse link
G Mrtfb myocardin related transcription factor B IAGP MGI PMID:20534669 NCBI chr16:13,073,913...13,235,393
Ensembl chr16:13,074,345...13,235,393
JBrowse link
G Notch1 notch 1 IAGP MGI PMID:16163386 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IAGP MGI PMID:18305161 NCBI chr 8:67,149,595...67,159,452
Ensembl chr 8:67,149,844...67,159,444
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IAGP MGI PMID:18305161 NCBI chr 3:82,445,688...82,455,404
Ensembl chr 3:82,445,690...82,455,391
JBrowse link
G Numb NUMB endocytic adaptor protein IAGP MGI PMID:17174898 NCBI chr12:83,840,808...83,968,708
Ensembl chr12:83,840,808...83,968,708
JBrowse link
G Numbl numb-like IAGP MGI PMID:17174898 NCBI chr 7:26,957,884...26,981,570
Ensembl chr 7:26,957,858...26,981,569
JBrowse link
G Olig3 oligodendrocyte transcription factor 3 IAGP MGI PMID:18829970 NCBI chr10:19,232,287...19,234,352
Ensembl chr10:19,232,281...19,234,352
JBrowse link
G Plxnb2 plexin B2 IAGP MGI PMID:23175841 PMID:26579598 NCBI chr15:89,039,752...89,064,960
Ensembl chr15:89,039,752...89,064,991
JBrowse link
G Prok2 prokineticin 2 IAGP MGI PMID:15976302 NCBI chr 6:99,687,833...99,703,368
Ensembl chr 6:99,688,260...99,703,353
JBrowse link
G Reln reelin IAGP MGI PMID:17494763 NCBI chr 5:22,089,452...22,549,703
Ensembl chr 5:22,089,452...22,549,700
JBrowse link
G Sp2 Sp2 transcription factor IAGP MGI PMID:23293287 NCBI chr11:96,844,158...96,873,785
Ensembl chr11:96,844,167...96,873,785
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 IAGP MGI PMID:17682066 NCBI chr 7:73,588,867...73,663,408
Ensembl chr 7:73,588,867...73,663,438
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 IAGP MGI PMID:17682066 NCBI chr 1:95,515,407...95,595,473
Ensembl chr 1:95,515,407...95,595,296
JBrowse link
G Trio triple functional domain (PTPRF interacting) IAGP MGI PMID:20516067 NCBI chr15:27,730,735...28,025,954
Ensembl chr15:27,730,737...28,025,934
JBrowse link
G Tshz1 teashirt zinc finger family member 1 IAGP MGI PMID:24487590 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831
JBrowse link
G Vax1 ventral anterior homeobox 1 IAGP MGI PMID:15590934 NCBI chr19:59,152,912...59,158,829
Ensembl chr19:59,154,619...59,158,488
JBrowse link
G Vldlr very low density lipoprotein receptor IAGP MGI PMID:17494763 NCBI chr19:27,190,070...27,231,631
Ensembl chr19:27,193,884...27,231,631
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17090
    nervous system phenotype 4653
      abnormal nervous system morphology 3676
        abnormal brain morphology 2186
          abnormal brain development 831
            abnormal olfactory bulb development 60
              abnormal rostral migratory stream morphology 33
Path 2
Term Annotations click to browse term
  mammalian phenotype 17090
    nervous system phenotype 4653
      abnormal nervous system morphology 3676
        abnormal brain morphology 2186
          abnormal forebrain morphology 1387
            abnormal telencephalon morphology 1084
              abnormal olfactory lobe morphology 222
                abnormal olfactory bulb morphology 201
                  abnormal olfactory bulb development 60
                    abnormal rostral migratory stream morphology 33
paths to the root