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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal double-negative T cell morphology
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Accession:MP:0002407 term browser browse the term
Definition:any structural anomaly of the subset of T cells found in the thymus that express neither CD4 nor CD8
Comment:These are precursors to mature T cells; normally, they do not circulate, but are found in the thymus and they have not undergone rearrangement of the alpha and beta T cell receptor genes.
Synonyms:exact_synonym: CD4-CD8- T cell abnormalities;   double-negative T cell abnormalities


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abnormal double-negative T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff1 AF4/FMR2 family, member 1 IAGP MGI PMID:12629167 NCBI chr 5:103,840,307...104,003,188
Ensembl chr 5:103,840,240...104,003,188 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene IAGP MGI PMID:7926765 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Card11 caspase recruitment domain family, member 11 IAGP MGI PMID:12867038 PMID:19260764 NCBI chr 5:140,858,109...140,986,398
Ensembl chr 5:140,858,745...140,986,337 		JBrowse link
G Cbl Casitas B-lineage lymphoma IAGP MGI PMID:16211006 NCBI chr 9:44,054,273...44,145,556
Ensembl chr 9:44,054,273...44,145,346 		JBrowse link
G Cd247 CD247 antigen IAGP MGI PMID:7520000 PMID:10072519 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846 		JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:11751756 PMID:16878135 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925 		JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:8500525 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184 		JBrowse link
G Cd8a CD8 subunit alpha IAGP MGI PMID:8500525 NCBI chr 6:71,350,411...71,356,155
Ensembl chr 6:71,350,411...71,356,157 		JBrowse link
G Dck deoxycytidine kinase IAGP MGI PMID:20080663 NCBI chr 5:88,912,872...88,931,136
Ensembl chr 5:88,912,855...88,931,140 		JBrowse link
G Fasl Fas ligand IAGP MGI PMID:14764677 NCBI chr 1:161,608,260...161,616,064
Ensembl chr 1:161,608,258...161,616,064 		JBrowse link
G Grap2 GRB2-related adaptor protein 2 IAGP MGI PMID:15265900 NCBI chr15:80,456,798...80,537,055
Ensembl chr15:80,456,795...80,537,055 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:17536012 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12065840 PMID:16878135 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:18342008 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295 		JBrowse link
G Malt1 MALT1 paracaspase IAGP MGI PMID:14576442 NCBI chr18:65,564,010...65,612,138
Ensembl chr18:65,564,009...65,612,138 		JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 IAGP MGI PMID:17640884 NCBI chr15:89,239,920...89,257,030
Ensembl chr15:89,239,922...89,257,029 		JBrowse link
G Nfatc2 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 IAGP MGI PMID:17579027 NCBI chr 2:168,318,330...168,443,900
Ensembl chr 2:168,318,330...168,443,577 		JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 IAGP MGI PMID:17579027 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169 		JBrowse link
G Nfkbie nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon IAGP MGI PMID:10570287 NCBI chr17:45,866,626...45,874,095
Ensembl chr17:45,866,629...45,874,095 		JBrowse link
G Ptch1 patched 1 IAGP MGI PMID:17536012 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:7520000 PMID:15021880 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:15021880 PMID:17617584 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rhoh ras homolog family member H IAGP MGI PMID:17119112 NCBI chr 5:66,018,092...66,054,043
Ensembl chr 5:66,018,556...66,054,043 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Shc1 src homology 2 domain-containing transforming protein C1 IAGP MGI PMID:12101399 NCBI chr 3:89,325,858...89,337,336
Ensembl chr 3:89,325,750...89,337,334 		JBrowse link
G Spi1 Spi-1 proto-oncogene IAGP MGI PMID:16311598 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101 		JBrowse link
G Stat5b signal transducer and activator of transcription 5B IAGP MGI PMID:9841920 NCBI chr11:100,671,557...100,741,407
Ensembl chr11:100,671,557...100,741,550 		JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:17617584 PMID:18203137 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:17617584 PMID:19380806 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:16473278 PMID:18203137 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Trdc T cell receptor delta, constant region IAGP MGI PMID:16878135 NCBI chr14:54,380,308...54,383,565
Ensembl chr14:54,380,308...54,386,325 		JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:16473278 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:9354466 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
G Was Wiskott-Aldrich syndrome IAGP MGI PMID:17878299 NCBI chr  X:7,947,705...7,956,730
Ensembl chr  X:7,947,692...7,956,737 		JBrowse link
G Wasl WASP like actin nucleation promoting factor IAGP MGI PMID:17878299 NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B IAGP MGI PMID:18776907 NCBI chr 3:89,284,953...89,300,976
Ensembl chr 3:89,284,951...89,302,083 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
decreased DN1 thymic pro-T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap45 Rho GTPase activating protein 45 IAGP MGI PMID:33719206 NCBI chr10:79,852,505...79,867,305
Ensembl chr10:79,852,487...79,867,306 		JBrowse link
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351 		JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:24069355 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167 		JBrowse link
G Gmnn geminin IAGP MGI PMID:20107189 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:24013668 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Mcm4 minichromosome maintenance complex component 4 IAGP MGI PMID:23133403 NCBI chr16:15,441,761...15,455,264
Ensembl chr16:15,441,761...15,455,264 		JBrowse link
G Prkch protein kinase C, eta IAGP MGI PMID:22155788 NCBI chr12:73,631,570...73,824,959
Ensembl chr12:73,631,570...73,824,959 		JBrowse link
G Prkcq protein kinase C, theta IAGP MGI PMID:22155788 NCBI chr 2:11,176,922...11,306,033
Ensembl chr 2:11,176,919...11,306,033 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Snrnp40 small nuclear ribonucleoprotein 40 (U5) IAGP MGI PMID:31427773 NCBI chr 4:130,253,925...130,283,826
Ensembl chr 4:130,253,925...130,283,819 		JBrowse link
G Syk spleen tyrosine kinase IAGP MGI PMID:22728826 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
decreased DN2 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BCL11 transcription factor A IAGP MGI PMID:23230003 NCBI chr11:24,026,498...24,123,558
Ensembl chr11:24,028,056...24,124,123 		JBrowse link
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23230003 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:24013668 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Lrrc8a leucine rich repeat containing 8A VRAC subunit A IAGP MGI PMID:24752297 NCBI chr 2:30,127,781...30,153,802
Ensembl chr 2:30,127,727...30,153,802 		JBrowse link
G Msi2 musashi RNA-binding protein 2 IAGP MGI PMID:21613258 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339 		JBrowse link
G Phf6 PHD finger protein 6 IAGP MGI PMID:30755422 NCBI chr  X:52,001,091...52,045,838
Ensembl chr  X:52,001,143...52,045,820 		JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Tle4 transducin-like enhancer of split 4 IAGP MGI PMID:25153823 NCBI chr19:14,425,434...14,575,542
Ensembl chr19:14,425,514...14,575,415 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 IAGP MGI PMID:22201126 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
decreased DN3 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:24013668 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Lrrc8a leucine rich repeat containing 8A VRAC subunit A IAGP MGI PMID:24752297 NCBI chr 2:30,127,781...30,153,802
Ensembl chr 2:30,127,727...30,153,802 		JBrowse link
G Msi2 musashi RNA-binding protein 2 IAGP MGI PMID:21613258 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor IAGP MGI PMID:25201955 NCBI chr 4:156,319,112...156,332,078
Ensembl chr 4:156,320,376...156,332,073 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Tsc22d3 TSC22 domain family, member 3 IAGP MGI PMID:22556341 NCBI chr  X:139,440,277...139,501,257
Ensembl chr  X:139,440,277...139,501,408 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 IAGP MGI PMID:22201126 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
decreased DN4 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:24069355 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167 		JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597 		JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Gmnn geminin IAGP MGI PMID:20107189 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Lrrc8a leucine rich repeat containing 8A VRAC subunit A IAGP MGI PMID:24752297 NCBI chr 2:30,127,781...30,153,802
Ensembl chr 2:30,127,727...30,153,802 		JBrowse link
G Nkap NFKB activating protein IAGP MGI PMID:19409814 NCBI chr  X:36,390,416...36,414,399
Ensembl chr  X:36,390,448...36,414,399 		JBrowse link
G Nmt1 N-myristoyltransferase 1 IAGP MGI PMID:26423150 NCBI chr11:102,919,163...102,959,734
Ensembl chr11:102,919,016...102,959,738 		JBrowse link
G Nmt2 N-myristoyltransferase 2 IAGP MGI PMID:26423150 NCBI chr 2:3,285,249...3,329,914
Ensembl chr 2:3,285,249...3,329,914 		JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor IAGP MGI PMID:25201955 NCBI chr 4:156,319,112...156,332,078
Ensembl chr 4:156,320,376...156,332,073 		JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) IAGP MGI PMID:32553171 NCBI chr 4:62,440,889...62,443,305
Ensembl chr 4:62,440,886...62,443,305 		JBrowse link
G Prkch protein kinase C, eta IAGP MGI PMID:22155788 NCBI chr12:73,631,570...73,824,959
Ensembl chr12:73,631,570...73,824,959 		JBrowse link
G Prkcq protein kinase C, theta IAGP MGI PMID:22155788 NCBI chr 2:11,176,922...11,306,033
Ensembl chr 2:11,176,919...11,306,033 		JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349 		JBrowse link
G Ptcra pre T cell antigen receptor alpha IAGP MGI PMID:17555992 PMID:23509324 NCBI chr17:47,066,589...47,074,659
Ensembl chr17:47,066,589...47,074,638 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:24068938 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Septin9 septin 9 IAGP MGI PMID:23644740 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151 		JBrowse link
G Snrnp40 small nuclear ribonucleoprotein 40 (U5) IAGP MGI PMID:31427773 NCBI chr 4:130,253,925...130,283,826
Ensembl chr 4:130,253,925...130,283,819 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 IAGP MGI PMID:21746917 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 IAGP MGI PMID:22201126 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
decreased double-negative T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:17998389 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 IAGP MGI PMID:14757745 NCBI chr11:117,740,063...117,746,569
Ensembl chr11:117,740,077...117,746,569 		JBrowse link
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:19155308 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Chek2 checkpoint kinase 2 IAGP MGI PMID:16357220 NCBI chr 5:110,987,668...111,022,006
Ensembl chr 5:110,987,845...111,022,011 		JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351 		JBrowse link
G Cpa3 carboxypeptidase A3, mast cell IAGP MGI PMID:19110448 NCBI chr 3:20,269,780...20,296,373
Ensembl chr 3:20,269,784...20,296,345 		JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:9109438 PMID:16973389 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 IAGP MGI PMID:18474632 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Flt3 FMS-like tyrosine kinase 3 IAGP MGI PMID:7621074 NCBI chr 5:147,267,551...147,337,299
Ensembl chr 5:147,267,551...147,337,299 		JBrowse link
G Flt3l FMS-like tyrosine kinase 3 ligand IAGP MGI PMID:12387740 NCBI chr 7:44,780,607...44,785,914
Ensembl chr 7:44,779,212...44,785,856 		JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:14528302 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:19934022 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gfi1 growth factor independent 1 transcription repressor IAGP MGI PMID:16397623 NCBI chr 5:107,864,521...107,873,671
Ensembl chr 5:107,864,523...107,873,902 		JBrowse link
G Gpr15 G protein-coupled receptor 15 IAGP MGI PMID:23661644 NCBI chr16:58,537,006...58,539,235
Ensembl chr16:58,537,796...58,539,433 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:16951689 PMID:28846072 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Ifng interferon gamma IAGP MGI PMID:9109438 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Igbp1 immunoglobulin (CD79A) binding protein 1 IAGP MGI PMID:12811850 NCBI chr  X:99,537,897...99,559,731
Ensembl chr  X:99,537,897...99,559,731 		JBrowse link
G Igh immunoglobulin heavy chain complex IAGP MGI PMID:16968900 NCBI chr12:113,222,388...115,973,574 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:12871645 PMID:24013668 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926 		JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:7697543 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861 		JBrowse link
G Il7 interleukin 7 IAGP MGI PMID:23018454 NCBI chr 3:7,637,088...7,678,820
Ensembl chr 3:7,635,054...7,678,820 		JBrowse link
G Kat6a K(lysine) acetyltransferase 6A IAGP MGI PMID:16651658 NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:7621074 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Kitl kit ligand IAGP MGI PMID:19874813 NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278 		JBrowse link
G Kmt2e lysine (K)-specific methyltransferase 2E IAGP MGI PMID:18952892 NCBI chr 5:23,638,034...23,709,233
Ensembl chr 5:23,639,439...23,709,233 		JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:28846072 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:10204488 PMID:12871507 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:19401562 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295 		JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent IAGP MGI PMID:20133615 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686 		JBrowse link
G Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 IAGP MGI PMID:7926766 NCBI chr17:49,238,630...49,404,619
Ensembl chr17:49,239,407...49,404,616 		JBrowse link
G Lrrc8a leucine rich repeat containing 8A VRAC subunit A IAGP MGI PMID:24752297 NCBI chr 2:30,127,781...30,153,802
Ensembl chr 2:30,127,727...30,153,802 		JBrowse link
G Mcl1 myeloid cell leukemia sequence 1 IAGP MGI PMID:14668867 PMID:18566418 PMID:19234191 NCBI chr 3:95,564,017...95,583,553
Ensembl chr 3:95,566,099...95,570,487 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 IAGP MGI PMID:12509446 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Msi2 musashi RNA-binding protein 2 IAGP MGI PMID:21613258 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IAGP MGI PMID:18802071 NCBI chr12:32,870,334...32,903,368
Ensembl chr12:32,869,544...32,903,348 		JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 IAGP MGI PMID:17640884 NCBI chr15:89,239,920...89,257,030
Ensembl chr15:89,239,922...89,257,029 		JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha IAGP MGI PMID:11067893 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432 		JBrowse link
G Notch1 notch 1 IAGP MGI PMID:10367900 PMID:18227520 PMID:19110448 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Pax1 paired box 1 IAGP MGI PMID:16093716 NCBI chr 2:147,203,850...147,216,972
Ensembl chr 2:147,203,845...147,235,215 		JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 IAGP MGI PMID:18462698 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839 		JBrowse link
G Pdia6 protein disulfide isomerase associated 6 IAGP MGI PMID:31985756 NCBI chr12:17,316,590...17,334,786
Ensembl chr12:17,316,546...17,334,771 		JBrowse link
G Phf6 PHD finger protein 6 IAGP MGI PMID:31395598 NCBI chr  X:52,001,091...52,045,838
Ensembl chr  X:52,001,143...52,045,820 		JBrowse link
G Plcg1 phospholipase C, gamma 1 IAGP MGI PMID:20123962 NCBI chr 2:160,573,230...160,617,680
Ensembl chr 2:160,573,220...160,617,680 		JBrowse link
G Prkch protein kinase C, eta IAGP MGI PMID:22155788 NCBI chr12:73,631,570...73,824,959
Ensembl chr12:73,631,570...73,824,959 		JBrowse link
G Prkcq protein kinase C, theta IAGP MGI PMID:22155788 NCBI chr 2:11,176,922...11,306,033
Ensembl chr 2:11,176,919...11,306,033 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:21482716 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Ptcra pre T cell antigen receptor alpha IEA MGI NCBI chr17:47,066,589...47,074,659
Ensembl chr17:47,066,589...47,074,638 		JBrowse link
G Rad50 RAD50 double strand break repair protein IAGP MGI PMID:16357220 NCBI chr11:53,540,346...53,598,146
Ensembl chr11:53,540,346...53,598,146 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:11751756 PMID:12531919 PMID:15197172 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rnf8 ring finger protein 8 IAGP MGI PMID:20385750 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965 		JBrowse link
G Rorc RAR-related orphan receptor gamma IAGP MGI PMID:15247480 NCBI chr 3:94,280,106...94,305,583
Ensembl chr 3:94,280,101...94,305,583 		JBrowse link
G Rpl22 ribosomal protein L22 IAGP MGI PMID:17555992 NCBI chr 4:152,408,893...152,418,539
Ensembl chr 4:152,410,199...152,418,528 		JBrowse link
G Runx1 runt related transcription factor 1 IAGP MGI PMID:17994017 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:12932351 PMID:18955569 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A IAGP MGI PMID:16357220 NCBI chr  X:150,799,386...150,844,969
Ensembl chr  X:150,799,424...150,845,690 		JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 IAGP MGI PMID:21746917 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882 		JBrowse link
G Speer6-ps1 spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1 IAGP MGI PMID:23018454 NCBI chr13:3,199,475...3,239,678
Ensembl chr13:3,236,206...3,239,317
Ensembl chr13:3,236,206...3,239,317 		JBrowse link
G Spi1 Spi-1 proto-oncogene IAGP MGI PMID:17994017 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101 		JBrowse link
G Sppl2a signal peptide peptidase like 2A IAGP MGI PMID:23267016 NCBI chr 2:126,732,311...126,775,706
Ensembl chr 2:126,732,311...126,775,155 		JBrowse link
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) IAGP MGI PMID:19145458 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517 		JBrowse link
G Tap1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) IAGP MGI PMID:1473153 NCBI chr17:34,406,530...34,416,199
Ensembl chr17:34,406,527...34,416,199 		JBrowse link
G Tlr7 toll-like receptor 7 IAGP MGI PMID:16973389 NCBI chr  X:166,086,376...166,113,570
Ensembl chr  X:166,087,925...166,113,554 		JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:14623913 PMID:16169499 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
G Vav2 vav 2 oncogene IAGP MGI PMID:14623913 NCBI chr 2:27,152,116...27,317,620
Ensembl chr 2:27,152,116...27,317,045 		JBrowse link
G Vav3 vav 3 oncogene IAGP MGI PMID:14623913 NCBI chr 3:109,247,757...109,593,010
Ensembl chr 3:109,247,969...109,593,014 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241 		JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425 		JBrowse link
increased DN1 thymic pro-T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 IAGP MGI PMID:25111180 NCBI chr 4:152,018,177...152,066,416
Ensembl chr 4:152,018,148...152,066,594 		JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:22072979 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 IAGP MGI PMID:21723201 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
increased DN2 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vav1 vav 1 oncogene IAGP MGI PMID:20009105 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
increased DN3 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:23267019 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925 		JBrowse link
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597 		JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Nkap NFKB activating protein IAGP MGI PMID:19409814 NCBI chr  X:36,390,416...36,414,399
Ensembl chr  X:36,390,448...36,414,399 		JBrowse link
G Nudcd3 NudC domain containing 3 IAGP MGI PMID:38787962 NCBI chr11:6,055,705...6,150,190
Ensembl chr11:6,055,691...6,150,415 		JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) IAGP MGI PMID:32553171 NCBI chr 4:62,440,889...62,443,305
Ensembl chr 4:62,440,886...62,443,305 		JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349 		JBrowse link
G Ptcra pre T cell antigen receptor alpha IAGP MGI PMID:17555992 PMID:21030681 NCBI chr17:47,066,589...47,074,659
Ensembl chr17:47,066,589...47,074,638 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:24068938 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:12433370 PMID:26753883 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rnf168 ring finger protein 168 IAGP MGI PMID:21552324 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Septin9 septin 9 IAGP MGI PMID:23644740 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151 		JBrowse link
G Syk spleen tyrosine kinase IAGP MGI PMID:22728826 NCBI chr13:52,736,670...52,802,828
Ensembl chr13:52,737,209...52,802,828 		JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:20009105 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
increased DN4 thymocyte number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsc22d3 TSC22 domain family, member 3 IAGP MGI PMID:22556341 NCBI chr  X:139,440,277...139,501,257
Ensembl chr  X:139,440,277...139,501,408 		JBrowse link
increased double-negative T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IAGP MGI PMID:9478961 NCBI chr 2:163,565,703...163,592,154
Ensembl chr 2:163,568,504...163,592,159 		JBrowse link
G Akt1 thymoma viral proto-oncogene 1 IAGP MGI PMID:17442925 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Akt2 thymoma viral proto-oncogene 2 IAGP MGI PMID:17442925 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Akt3 thymoma viral proto-oncogene 3 IAGP MGI PMID:17442925 NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769 		JBrowse link
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:16025118 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 IAGP MGI PMID:19861679 NCBI chr 2:153,187,750...153,245,927
Ensembl chr 2:153,187,749...153,245,927 		JBrowse link
G Atm ataxia telangiectasia mutated IAGP MGI PMID:11389091 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Bcl10 B cell leukemia/lymphoma 10 IAGP MGI PMID:11163238 NCBI chr 3:145,630,017...145,640,121
Ensembl chr 3:145,628,559...145,640,111 		JBrowse link
G Bcl11a BCL11 transcription factor A IAGP MGI PMID:12717432 NCBI chr11:24,026,498...24,123,558
Ensembl chr11:24,028,056...24,124,123 		JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:12717433 PMID:23663453 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:8402909 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bcl2l11 BCL2 like 11 IAGP MGI PMID:10576740 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467 		JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 IAGP MGI PMID:11668339 NCBI chr 6:108,637,590...108,643,886
Ensembl chr 6:108,637,590...108,643,886 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 IAGP MGI PMID:14699085 NCBI chr11:117,740,063...117,746,569
Ensembl chr11:117,740,077...117,746,569 		JBrowse link
G Brca1 breast cancer 1, early onset IAGP MGI PMID:10881179 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G Ccnb2 cyclin B2 IAGP MGI PMID:9539739 NCBI chr 9:70,314,971...70,328,836
Ensembl chr 9:70,314,974...70,328,829 		JBrowse link
G Ccnd3 cyclin D3 IAGP MGI PMID:14706337 NCBI chr17:47,815,976...47,910,614
Ensembl chr17:47,815,976...47,910,616 		JBrowse link
G Cd180 CD180 antigen IAGP MGI PMID:18492657 NCBI chr13:102,830,055...102,843,139
Ensembl chr13:102,830,066...102,876,137 		JBrowse link
G Cd19 CD19 antigen IAGP MGI PMID:15148335 NCBI chr 7:126,007,620...126,016,401
Ensembl chr 7:126,007,622...126,014,061 		JBrowse link
G Cd247 CD247 antigen IAGP MGI PMID:8223444 PMID:8223495 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846 		JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:9843989 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925 		JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:8671660 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184 		JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366 		JBrowse link
G Cdk6 cyclin dependent kinase 6 IAGP MGI PMID:21508411 NCBI chr 5:3,391,004...3,581,008
Ensembl chr 5:3,391,485...3,581,008 		JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 IAGP MGI PMID:15189737 NCBI chr 6:125,073,144...125,107,554
Ensembl chr 6:125,072,944...125,107,554 		JBrowse link
G Col10a1 collagen, type X, alpha 1 IAGP MGI PMID:10811836 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081 		JBrowse link
G Crebbp CREB binding protein IAGP MGI PMID:16428436 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861 		JBrowse link
G Ctcf CCCTC-binding factor IAGP MGI PMID:18923423 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554 		JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 IAGP MGI PMID:7584144 PMID:9256476 NCBI chr 1:60,948,184...60,954,991
Ensembl chr 1:60,926,159...60,954,991 		JBrowse link
G Dck deoxycytidine kinase IAGP MGI PMID:20080663 NCBI chr 5:88,912,872...88,931,136
Ensembl chr 5:88,912,855...88,931,140 		JBrowse link
G Dffb DNA fragmentation factor, beta subunit IAGP MGI PMID:12524536 NCBI chr 4:154,048,904...154,059,578
Ensembl chr 4:154,048,906...154,059,583 		JBrowse link
G Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 IAGP MGI PMID:25111180 NCBI chr 4:152,018,177...152,066,416
Ensembl chr 4:152,018,148...152,066,594 		JBrowse link
G Dnase2a deoxyribonuclease II alpha IAGP MGI PMID:12524536 NCBI chr 8:85,635,384...85,638,332
Ensembl chr 8:85,635,189...85,649,544 		JBrowse link
G Dnmt3b DNA methyltransferase 3B IAGP MGI PMID:16501171 NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650 		JBrowse link
G E2f4 E2F transcription factor 4 IAGP MGI PMID:10983977 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002 		JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597 		JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IAGP MGI PMID:19454673 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413 		JBrowse link
G Ep300 E1A binding protein p300 IAGP MGI PMID:16428436 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain IAGP MGI PMID:16818745 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IAGP MGI PMID:22431509 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G Fadd Fas associated via death domain IAGP MGI PMID:11353862 NCBI chr 7:144,132,060...144,136,178
Ensembl chr 7:144,131,055...144,136,200 		JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:7540652 PMID:12571859 PMID:15148335 PMID:16339515 PMID:16818796 More... NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fbxo7 F-box protein 7 IAGP MGI PMID:30840666 NCBI chr10:85,856,313...85,887,737
Ensembl chr10:85,857,836...85,887,737 		JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:12571859 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934 		JBrowse link
G Fcgr2b Fc receptor, IgG, low affinity IIb IAGP MGI PMID:23123062 NCBI chr 1:170,786,186...170,804,141
Ensembl chr 1:170,786,186...170,804,116 		JBrowse link
G Grap2 GRB2-related adaptor protein 2 IAGP MGI PMID:11239162 NCBI chr15:80,456,798...80,537,055
Ensembl chr15:80,456,795...80,537,055 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:17536012 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 IAGP MGI PMID:8388689 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 IAGP MGI PMID:22773818 NCBI chr11:46,630,644...46,670,405
Ensembl chr11:46,625,907...46,670,405 		JBrowse link
G Hdac1 histone deacetylase 1 IAGP MGI PMID:23287868 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac2 histone deacetylase 2 IAGP MGI PMID:23287868 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hells helicase, lymphoid specific IAGP MGI PMID:10781083 NCBI chr19:38,913,282...38,958,914
Ensembl chr19:38,919,359...38,959,495 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IAGP MGI PMID:22523384 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691 		JBrowse link
G Il17a interleukin 17A IAGP MGI PMID:23123062 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720 		JBrowse link
G Il6st interleukin 6 signal transducer IAGP MGI PMID:12370259 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620 		JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:8692964 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262 		JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 IAGP MGI PMID:23997217 NCBI chr 6:128,386,407...128,401,873
Ensembl chr 6:128,386,407...128,401,894 		JBrowse link
G Itgb2 integrin beta 2 IAGP MGI PMID:17119112 NCBI chr10:77,366,164...77,401,542
Ensembl chr10:77,366,086...77,401,542 		JBrowse link
G Itk IL2 inducible T cell kinase IAGP MGI PMID:8777721 PMID:19009524 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342 		JBrowse link
G Jak1 Janus kinase 1 IAGP MGI PMID:9590172 NCBI chr 4:101,009,171...101,122,493
Ensembl chr 4:101,009,564...101,122,479 		JBrowse link
G Krt14 keratin 14 IAGP MGI PMID:23918954 NCBI chr11:100,093,988...100,098,336
Ensembl chr11:100,093,988...100,098,374 		JBrowse link
G Lag3 lymphocyte-activation gene 3 IAGP MGI PMID:8671660 NCBI chr 6:124,881,322...124,888,668
Ensembl chr 6:124,881,324...124,888,668 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:19701892 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:19401562 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295 		JBrowse link
G Maml1 mastermind like transcriptional coactivator 1 IAGP MGI PMID:17535917 NCBI chr11:50,146,461...50,183,163
Ensembl chr11:50,146,461...50,183,138 		JBrowse link
G Map3k3 mitogen-activated protein kinase kinase kinase 3 IAGP MGI PMID:19223432 NCBI chr11:105,975,358...106,047,482
Ensembl chr11:105,975,439...106,046,272 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 IAGP MGI PMID:19011223 NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Nckap1l NCK associated protein 1 like IAGP MGI PMID:19015308 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237 		JBrowse link
G Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 IAGP MGI PMID:9462518 NCBI chr18:80,649,418...80,756,286
Ensembl chr18:80,649,420...80,756,286 		JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 IAGP MGI PMID:9768749 PMID:17579027 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169 		JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 IAGP MGI PMID:18025196 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824 		JBrowse link
G Nmt1 N-myristoyltransferase 1 IAGP MGI PMID:26423150 NCBI chr11:102,919,163...102,959,734
Ensembl chr11:102,919,016...102,959,738 		JBrowse link
G Nmt2 N-myristoyltransferase 2 IAGP MGI PMID:26423150 NCBI chr 2:3,285,249...3,329,914
Ensembl chr 2:3,285,249...3,329,914 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 IAGP MGI PMID:17565376 NCBI chr 8:89,373,943...89,415,103
Ensembl chr 8:89,373,943...89,415,102 		JBrowse link
G Nudcd3 NudC domain containing 3 IAGP MGI PMID:38787962 NCBI chr11:6,055,705...6,150,190
Ensembl chr11:6,055,691...6,150,415 		JBrowse link
G Pax1 paired box 1 IAGP MGI PMID:16093716 NCBI chr 2:147,203,850...147,216,972
Ensembl chr 2:147,203,845...147,235,215 		JBrowse link
G Phf20 PHD finger protein 20 IAGP MGI PMID:22072714 NCBI chr 2:156,038,567...156,151,873
Ensembl chr 2:156,038,386...156,151,872 		JBrowse link
G Pknox1 Pbx/knotted 1 homeobox IAGP MGI PMID:16314502 NCBI chr17:31,783,697...31,826,665
Ensembl chr17:31,783,708...31,826,667 		JBrowse link
G Pnp purine-nucleoside phosphorylase IAGP MGI PMID:1781357 PMID:9122228 PMID:10859343 NCBI chr14:51,181,760...51,190,869
Ensembl chr14:51,168,539...51,190,869 		JBrowse link
G Pole4 polymerase (DNA-directed), epsilon 4 (p12 subunit) IAGP MGI PMID:29754823 NCBI chr 6:82,593,513...82,629,985
Ensembl chr 6:82,595,973...82,682,346 		JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit IAGP MGI PMID:17060460 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668 		JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:9768755 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099 		JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349 		JBrowse link
G Ptch1 patched 1 IAGP MGI PMID:17536012 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412 		JBrowse link
G Ptcra pre T cell antigen receptor alpha IAGP MGI PMID:15197172 NCBI chr17:47,066,589...47,074,659
Ensembl chr17:47,066,589...47,074,638 		JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:8334701 PMID:8666928 PMID:10508267 PMID:24068938 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446 		JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:14581608 PMID:19126872 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:15197172 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:12039915 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Rhoh ras homolog family member H IAGP MGI PMID:17119112 NCBI chr 5:66,018,092...66,054,043
Ensembl chr 5:66,018,556...66,054,043 		JBrowse link
G Rictor RPTOR independent companion of MTOR, complex 2 IAGP MGI PMID:22815285 NCBI chr15:6,737,827...6,829,882
Ensembl chr15:6,737,860...6,829,882 		JBrowse link
G Rnf168 ring finger protein 168 IAGP MGI PMID:21552324 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252 		JBrowse link
G Rorc RAR-related orphan receptor gamma IAGP MGI PMID:10963675 NCBI chr 3:94,280,106...94,305,583
Ensembl chr 3:94,280,101...94,305,583 		JBrowse link
G Runx1 runt related transcription factor 1 IAGP MGI PMID:17646406 PMID:17994017 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037 		JBrowse link
G Septin9 septin 9 IAGP MGI PMID:23644740 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:18955569 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Spi1 Spi-1 proto-oncogene IAGP MGI PMID:17994017 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101 		JBrowse link
G Srsf2 serine and arginine-rich splicing factor 2 IAGP MGI PMID:11239462 NCBI chr11:116,740,723...116,744,511
Ensembl chr11:116,740,727...116,743,920 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 IAGP MGI PMID:22411629 NCBI chr18:37,773,544...37,777,257
Ensembl chr18:37,773,544...37,777,257 		JBrowse link
G Tbata thymus, brain and testes associated IAGP MGI PMID:20937703 NCBI chr10:61,007,743...61,024,620
Ensembl chr10:61,007,733...61,024,620 		JBrowse link
G Tcf12 transcription factor 12 IAGP MGI PMID:10958665 PMID:11937548 PMID:17442955 PMID:18384878 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153 		JBrowse link
G Tcf3 transcription factor 3 IAGP MGI PMID:11937548 PMID:17442955 PMID:18384878 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481 		JBrowse link
G Tcf4 transcription factor 4 IAGP MGI PMID:18384878 NCBI chr18:69,476,500...69,821,038
Ensembl chr18:69,476,427...69,822,150 		JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:9751751 PMID:23853545 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 IAGP MGI PMID:21723201 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
G Tlr9 toll-like receptor 9 IAGP MGI PMID:16818796 PMID:16973389 NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082 		JBrowse link
G Tnfrsf9 tumor necrosis factor receptor superfamily, member 9 IAGP MGI PMID:17608689 PMID:17898284 NCBI chr 4:151,004,612...151,030,561
Ensembl chr 4:150,999,019...151,030,559 		JBrowse link
G Tpp2 tripeptidyl peptidase II IAGP MGI PMID:18362329 NCBI chr 1:43,973,130...44,042,160
Ensembl chr 1:43,972,807...44,042,160 		JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 IAGP MGI PMID:23123062 NCBI chr10:39,488,930...39,531,303
Ensembl chr10:39,488,930...39,531,303 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 IAGP MGI PMID:12640136 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:9601639 PMID:20009105 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031 		JBrowse link
G Wls wntless WNT ligand secretion mediator IAGP MGI PMID:23918954 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300 		JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 IAGP MGI PMID:8756720 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111 		JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B IAGP MGI PMID:18776907 NCBI chr 3:89,284,953...89,300,976
Ensembl chr 3:89,284,951...89,302,083 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16963
    immune system phenotype 5709
      abnormal immune system morphology 4077
        abnormal immune system development 912
          abnormal leukopoiesis 870
            abnormal lymphopoiesis 747
              abnormal T cell differentiation 489
                abnormal double-negative T cell morphology 200
                  decreased double-negative T cell number + 92
                  increased double-negative T cell number + 122
Path 2
Term Annotations click to browse term
  mammalian phenotype 16963
    hematopoietic system phenotype 5542
      abnormal hematopoietic system morphology/development 5068
        abnormal hematopoietic cell morphology 4234
          abnormal blood cell morphology 3179
            abnormal hemopoiesis 1158
              abnormal definitive hematopoiesis 1131
                abnormal leukopoiesis 870
                  abnormal lymphopoiesis 747
                    abnormal T cell differentiation 489
                      abnormal double-negative T cell morphology 200
                        decreased double-negative T cell number + 92
                        increased double-negative T cell number + 122
paths to the root