MAMMALIAN PHENOTYPE - ANNOTATIONS
The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term: short mandible
Accession: MP:0000088
browse the term
Definition: reduced length of the lower bony framework of the mouth where the inferior teeth are held
Synonyms: exact_synonym: reduced mandible length; truncated mandible
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Acvr1
activin A receptor, type 1
IAGP
MGI
PMID:15037318
NCBI chr 2:58,336,450...58,456,840
Ensembl chr 2:58,278,656...58,457,169
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Alx1
ALX homeobox 1
IAGP
MGI
PMID:8673125 PMID:9847249
NCBI chr10:102,834,564...102,865,501
Ensembl chr10:102,834,568...102,866,076
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Alx4
aristaless-like homeobox 4
IAGP
MGI
PMID:9847249
NCBI chr 2:93,472,779...93,511,686
Ensembl chr 2:93,472,729...93,511,684
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Baz1b
bromodomain adjacent to zinc finger domain, 1B
IAGP
MGI
PMID:19099580
NCBI chr 5:135,214,094...135,274,985
Ensembl chr 5:135,216,118...135,274,983
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Bcor
BCL6 interacting corepressor
IAGP
MGI
PMID:32692983
NCBI chr X:11,902,976...12,026,769
Ensembl chr X:11,902,979...12,026,594
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Bmp2
bone morphogenetic protein 2
IAGP
MGI
PMID:30413887
NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
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Bmp4
bone morphogenetic protein 4
IAGP
MGI
PMID:22219353
NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
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Bmp5
bone morphogenetic protein 5
IAGP
MGI
PMID:26234751
NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592
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Brd4
bromodomain containing 4
IAGP
MGI
PMID:11997514
NCBI chr17:32,415,246...32,503,717
Ensembl chr17:32,415,248...32,503,696
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Cacna1s
calcium channel, voltage-dependent, L type, alpha 1S subunit
IAGP
MGI
PMID:14300095 PMID:14300096
NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
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Cask
calcium/calmodulin dependent serine protein kinase
IAGP
MGI
PMID:8494785
NCBI chr X:13,383,319...13,713,020
Ensembl chr X:13,383,319...13,717,606
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Ccn2
cellular communication network factor 2
IAGP
MGI
PMID:12736220
NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
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Cfdp1
craniofacial development protein 1
IAGP
MGI
PMID:38630655
NCBI chr 8:112,493,314...112,580,969
Ensembl chr 8:112,495,123...112,580,923
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Chrd
chordin
IAGP
MGI
PMID:19247433
NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134
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Chrna7
cholinergic receptor, nicotinic, alpha polypeptide 7
IAGP
MGI
PMID:22473653
NCBI chr 7:62,748,440...62,862,274
Ensembl chr 7:62,748,440...62,862,317
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Chst11
carbohydrate sulfotransferase 11
IAGP
MGI
PMID:16079159
NCBI chr10:82,820,274...83,031,738
Ensembl chr10:82,821,332...83,031,734
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Chuk
conserved helix-loop-helix ubiquitous kinase
IAGP
MGI
PMID:10195896
NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919
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Col11a1
collagen, type XI, alpha 1
IAGP
MGI
PMID:4100752
NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367
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Col2a1
collagen, type II, alpha 1
IAGP
MGI
PMID:7276808 PMID:11680679 PMID:20730911 PMID:25541700
NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576
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Dlx5
distal-less homeobox 5
IAGP
MGI
PMID:10433909
NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
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Dph1
diphthamide biosynthesis 1
IAGP
MGI
PMID:24895408
NCBI chr11:75,068,469...75,081,309
Ensembl chr11:75,068,469...75,082,067
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E2f1
E2F transcription factor 1
IAGP
MGI
PMID:32991838 PMID:38630655
NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
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Edil3
EGF-like repeats and discoidin I-like domains 3
IAGP
MGI
PMID:24895408
NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342
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Ednra
endothelin receptor type A
IAGP
MGI
PMID:19185569 PMID:27671791
NCBI chr 8:78,389,658...78,451,081
Ensembl chr 8:78,389,660...78,451,093
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Egfr
epidermal growth factor receptor
IAGP
MGI
PMID:10319864
NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
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Emx1
empty spiracles homeobox 1
IAGP
MGI
PMID:16410414
NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
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Fgf9
fibroblast growth factor 9
IAGP
MGI
PMID:33959039
NCBI chr14:58,308,543...58,350,311
Ensembl chr14:58,308,004...58,350,177
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Fgfr1
fibroblast growth factor receptor 1
IAGP
MGI
PMID:15630379
NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734
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Fgfr2
fibroblast growth factor receptor 2
IAGP
MGI
PMID:20175913
NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
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Foxc1
forkhead box C1
IEA
MGI
NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
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Foxd3
forkhead box D3
IAGP
MGI
PMID:18367558
NCBI chr 4:99,544,536...99,546,908
Ensembl chr 4:99,544,536...99,546,859
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Foxg1
forkhead box G1
IAGP
MGI
PMID:16452092
NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
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Fzd1
frizzled class receptor 1
IAGP
MGI
PMID:20940229
NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035
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Fzd2
frizzled class receptor 2
IAGP
MGI
PMID:20940229
NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884
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Gas1
growth arrest specific 1
IAGP
MGI
PMID:17504941
NCBI chr13:60,322,219...60,325,179
Ensembl chr13:60,322,219...60,325,179
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Gna11
guanine nucleotide binding protein, alpha 11
IAGP
MGI
PMID:9687499
NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024
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Gnaq
guanine nucleotide binding protein, alpha q polypeptide
IAGP
MGI
PMID:9687499
NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827
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Gnas
GNAS complex locus
IAGP
MGI
PMID:26859889
NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537
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Gsc
goosecoid homeobox
IAGP
MGI
PMID:7555726
NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589
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Gt(ROSA)26Sor
gene trap ROSA 26, Philippe Soriano
IAGP
MGI
PMID:22219353 PMID:22473653 PMID:26545946 PMID:32692983 PMID:37075751
NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
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H2az2
H2A.Z histone variant 2
IAGP
MGI
PMID:12878728 PMID:15037318 PMID:17376812 PMID:17420000 PMID:18367558 PMID:18501887 PMID:18652813 PMID:19185569 PMID:19706403 PMID:20106874 PMID:22219353 PMID:23546880 PMID:24700590 PMID:24895408 PMID:26859889 PMID:27362800 PMID:29727702 PMID:29986157 PMID:30413887 PMID:31526805 More...
NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
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Hand2
heart and neural crest derivatives expressed 2
IAGP
MGI
PMID:18501887
NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
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Has2
hyaluronan synthase 2
IAGP
MGI
PMID:31526805
NCBI chr15:56,529,023...56,557,942
Ensembl chr15:56,529,023...56,557,935
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Hnrnph2
heterogeneous nuclear ribonucleoprotein H2
IAGP
MGI
PMID:37463454
NCBI chr X:133,501,928...133,507,809
Ensembl chr X:133,501,928...133,507,809
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Hoxa3
homeobox A3
IAGP
MGI
PMID:1673020
NCBI chr 6:52,146,039...52,190,316
Ensembl chr 6:52,146,042...52,190,316
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Hspg2
perlecan (heparan sulfate proteoglycan 2)
IAGP
MGI
PMID:10545953 PMID:10579729
NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941
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Ifitm5
interferon induced transmembrane protein 5
IAGP
MGI
PMID:29174564
NCBI chr 7:140,528,871...140,530,156
Ensembl chr 7:140,528,871...140,530,204
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Ihh
Indian hedgehog
IAGP
MGI
PMID:10465785
NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831
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Kat6b
K(lysine) acetyltransferase 6B
IAGP
MGI
PMID:21804188
NCBI chr14:21,549,284...21,722,546
Ensembl chr14:21,531,502...21,722,546
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Kif3a
kinesin family member 3A
IAGP
MGI
PMID:20106874
NCBI chr11:53,456,531...53,495,075
Ensembl chr11:53,458,206...53,492,794
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Lamp1
lysosomal-associated membrane protein 1
IAGP
MGI
PMID:15121881
NCBI chr 8:13,209,161...13,225,338
Ensembl chr 8:13,209,161...13,225,338
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Lamp2
lysosomal-associated membrane protein 2
IAGP
MGI
PMID:15121881
NCBI chr X:37,488,524...37,545,337
Ensembl chr X:37,490,234...37,545,331
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Limk2
LIM domain kinase 2
IEA
MGI
NCBI chr11:3,293,297...3,359,238
Ensembl chr11:3,294,256...3,359,189
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Loxl3
lysyl oxidase-like 3
IAGP
MGI
PMID:26307084
NCBI chr 6:83,011,186...83,029,547
Ensembl chr 6:83,011,154...83,029,543
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Lrp6
low density lipoprotein receptor-related protein 6
IAGP
MGI
PMID:21237142
NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928
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Ltbp1
latent transforming growth factor beta binding protein 1
IAGP
MGI
PMID:17950478
NCBI chr17:75,312,475...75,699,507
Ensembl chr17:75,312,563...75,699,507
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Map3k7
mitogen-activated protein kinase kinase kinase 7
IAGP
MGI
PMID:23546880
NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467
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Mau2
MAU2 sister chromatid cohesion factor
IAGP
MGI
PMID:24700590
NCBI chr 8:70,465,896...70,495,384
Ensembl chr 8:70,468,773...70,495,384
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Mbtps1
membrane-bound transcription factor peptidase, site 1
IAGP
MGI
PMID:18025304
NCBI chr 8:120,234,890...120,285,603
Ensembl chr 8:120,234,895...120,285,474
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Mef2c
myocyte enhancer factor 2C
IAGP
MGI
PMID:17420000
NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
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Meis2
Meis homeobox 2
IAGP
MGI
PMID:26545946
NCBI chr 2:115,691,745...115,897,925
Ensembl chr 2:115,693,545...115,896,320
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Mmp14
matrix metallopeptidase 14 (membrane-inserted)
IAGP
MGI
PMID:10737763
NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
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Mmp2
matrix metallopeptidase 2
IAGP
MGI
PMID:17400654
NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048
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Msx1
msh homeobox 1
IAGP
MGI
PMID:7914451
NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
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Nipbl
NIPBL cohesin loading factor
IAGP
MGI
PMID:24700590
NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947
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Pappa2
pappalysin 2
IAGP
MGI
PMID:23457539
NCBI chr 1:158,539,297...158,788,019
Ensembl chr 1:158,539,297...158,808,060
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Pax3
paired box 3
IAGP
MGI
PMID:18832392 PMID:32692983
NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
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Pdpk1
3-phosphoinositide dependent protein kinase 1
IAGP
MGI
PMID:16219676
NCBI chr17:24,292,654...24,370,957
Ensembl chr17:24,292,654...24,369,898
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Pds5b
PDS5 cohesin associated factor B
IAGP
MGI
PMID:17652350
NCBI chr 5:150,597,178...150,734,174
Ensembl chr 5:150,597,204...150,734,155
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Pdss2
prenyl (solanesyl) diphosphate synthase, subunit 2
IAGP
MGI
PMID:21871565
NCBI chr10:43,095,396...43,340,878
Ensembl chr10:43,097,482...43,340,878
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Phex
phosphate regulating endopeptidase homolog, X-linked
IAGP
MGI
PMID:1962291
NCBI chr X:155,945,071...156,198,282
Ensembl chr X:155,945,071...156,198,308
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Pitx1
paired-like homeodomain transcription factor 1
IAGP
MGI
PMID:10049363
NCBI chr13:55,972,857...55,984,002
Ensembl chr13:55,972,864...55,984,005
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Pkd1
polycystin 1, transient receptor potential channel interacting
IAGP
MGI
PMID:18652813
NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482
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Pole4
polymerase (DNA-directed), epsilon 4 (p12 subunit)
IAGP
MGI
PMID:29754823
NCBI chr 6:82,593,513...82,629,985
Ensembl chr 6:82,595,973...82,682,346
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Polr1a
polymerase (RNA) I polypeptide A
IAGP
MGI
PMID:37075751
NCBI chr 6:71,886,037...71,956,419
Ensembl chr 6:71,886,037...71,961,919
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Prickle1
prickle planar cell polarity protein 1
IAGP
MGI
PMID:25190059
NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772
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Prmt1
protein arginine N-methyltransferase 1
IAGP
MGI
PMID:29727702 PMID:29986157
NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992
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Prrx1
paired related homeobox 1
IAGP
MGI
PMID:9729491 PMID:9876178
NCBI chr 1:163,072,688...163,142,714
Ensembl chr 1:163,072,688...163,141,279
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Prrx2
paired related homeobox 2
IAGP
MGI
PMID:9729491 PMID:9876178
NCBI chr 2:30,735,076...30,771,263
Ensembl chr 2:30,724,984...30,771,263
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Pth1r
parathyroid hormone 1 receptor
IAGP
MGI
PMID:8662561
NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213
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Pthlh
parathyroid hormone-like peptide
IAGP
MGI
PMID:8314082 PMID:9391087 PMID:9751753 PMID:11316774 PMID:11760831
NCBI chr 6:147,153,607...147,165,511
Ensembl chr 6:147,153,599...147,165,681
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Ptprf
protein tyrosine phosphatase receptor type F
IAGP
MGI
PMID:23863482
NCBI chr 4:118,065,410...118,148,602
Ensembl chr 4:118,065,410...118,148,602
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Ptprs
protein tyrosine phosphatase receptor type S
IAGP
MGI
PMID:23863482
NCBI chr17:56,719,426...56,783,480
Ensembl chr17:56,719,426...56,783,483
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Rfng
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IAGP
MGI
PMID:10391239
NCBI chr11:120,671,571...120,675,077
Ensembl chr11:120,671,572...120,675,033
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Ror2
receptor tyrosine kinase-like orphan receptor 2
IAGP
MGI
PMID:14745966 PMID:18353862
NCBI chr13:53,263,353...53,440,160
Ensembl chr13:53,263,348...53,440,160
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Rspo2
R-spondin 2
IAGP
MGI
PMID:21237142
NCBI chr15:42,884,184...43,034,990
Ensembl chr15:42,884,190...43,034,222
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Ryk
receptor-like tyrosine kinase
IAGP
MGI
PMID:10932185
NCBI chr 9:102,712,119...102,785,506
Ensembl chr 9:102,712,116...102,785,504
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Satb2
special AT-rich sequence binding protein 2
IAGP
MGI
PMID:16751105
NCBI chr 1:56,833,145...57,019,350
Ensembl chr 1:56,833,140...57,017,809
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Sh3pxd2b
SH3 and PX domains 2B
IAGP
MGI
PMID:20137777
NCBI chr11:32,297,777...32,378,189
Ensembl chr11:32,297,820...32,378,173
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Shh
sonic hedgehog
IAGP
MGI
PMID:17504941 PMID:18213582
NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
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Six1
sine oculis-related homeobox 1
IAGP
MGI
PMID:12834866 PMID:15788460
NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
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Six4
sine oculis-related homeobox 4
IAGP
MGI
PMID:15788460
NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230
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Ski
ski sarcoma viral oncogene homolog (avian)
IAGP
MGI
PMID:9284043
NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049
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Snai1
snail family zinc finger 1
IAGP
MGI
PMID:17376812
NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734
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Snai2
snail family zinc finger 2
IAGP
MGI
PMID:17376812
NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249
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Sostdc1
sclerostin domain containing 1
IEA
MGI
NCBI chr12:36,364,168...36,368,451
Ensembl chr12:36,364,138...36,368,451
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Sox11
SRY (sex determining region Y)-box 11
IAGP
MGI
PMID:26826126
NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
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Sox9
SRY (sex determining region Y)-box 9
IAGP
MGI
PMID:11371614 PMID:12878728 PMID:32991838
NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
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Stk11
serine/threonine kinase 11
IAGP
MGI
PMID:27527806
NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516
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Sulf1
sulfatase 1
IAGP
MGI
PMID:18213582
NCBI chr 1:12,762,421...12,946,090
Ensembl chr 1:12,762,501...12,931,416
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Sulf2
sulfatase 2
IAGP
MGI
PMID:18213582
NCBI chr 2:165,915,819...165,997,603
Ensembl chr 2:165,915,009...165,997,583
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Tbx1
T-box 1
IAGP
MGI
PMID:11242110 PMID:16452092 PMID:19247433
NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
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Tbx15
T-box 15
IAGP
MGI
PMID:15728667
NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575
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Tcof1
treacle ribosome biogenesis factor 1
IAGP
MGI
PMID:10888597
NCBI chr18:60,946,827...60,982,055
Ensembl chr18:60,946,827...60,982,043
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Tfap2a
transcription factor AP-2, alpha
IAGP
MGI
PMID:11967920 PMID:26545946
NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
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Tfrc
transferrin receptor
IAGP
MGI
PMID:27362800
NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612
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Tgfb2
transforming growth factor, beta 2
IAGP
MGI
PMID:9217007
NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
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Tmem107
transmembrane protein 107
IAGP
MGI
PMID:28954202
NCBI chr11:68,961,635...68,964,119
Ensembl chr11:68,961,632...68,964,119
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Tmem163
transmembrane protein 163
IAGP
MGI
PMID:11316774 PMID:32692983
NCBI chr 1:127,418,079...127,605,758
Ensembl chr 1:127,414,283...127,607,285
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Trp53
transformation related protein 53
IAGP
MGI
PMID:25119037
NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
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Trps1
transcriptional repressor GATA binding 1
IAGP
MGI
PMID:17997399 PMID:31130868
NCBI chr15:50,518,149...50,754,027
Ensembl chr15:50,518,148...50,753,859
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Vegfa
vascular endothelial growth factor A
IAGP
MGI
PMID:12539040
NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
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Wdr19
WD repeat domain 19
IAGP
MGI
PMID:22228095
NCBI chr 5:65,357,039...65,417,758
Ensembl chr 5:65,357,039...65,417,758
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Wnt3a
wingless-type MMTV integration site family, member 3A
IAGP
MGI
PMID:16410414
NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578
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Wnt5a
wingless-type MMTV integration site family, member 5A
IAGP
MGI
PMID:10021340
NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405
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Xylt1
xylosyltransferase 1
IAGP
MGI
PMID:24161523
NCBI chr 7:116,980,214...117,266,853
Ensembl chr 7:116,980,214...117,272,803
G
Zeb1
zinc finger E-box binding homeobox 1
IAGP
MGI
PMID:9389660
NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all