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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:photometry
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Accession:MMO:0000704 term browser browse the term
Definition:The measurement of transmittance (a linear scale from 0-100%) or absorbance (a logarithmic scale from zero to infinity) of particular wavelengths of light by the use of filters. Concentration values of solutes are calculated from measured values.
Synonyms:exact_synonym: filter colorimetry


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bromocresol green-based urine albumin analysis with spectrophotometric readout term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf3 Renal disease susceptibility QTL 3 IDA 0.001 6.5 RGD PMID:11053483 RGD:70856
colorimetry term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl32 Serum triglyceride level QTL 32 IDA 3.0E-4 3.2 RGD PMID:20159938 RGD:7365117 NCBI chr 2:24,117,813...69,117,813 JBrowse link
Q Sual1 Serum uric acid level QTL 1 IDA 0.0123 3.4 RGD PMID:15728334 RGD:1580752 NCBI chr 3:116,582,412...122,654,872 JBrowse link
liquid phase colorimetry term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco65 Glucose level QTL 65 IDA 0.001 6.82 RGD PMID:25003539 RGD:8694157 NCBI chr 9:496,645...45,496,645 JBrowse link
Q Gluco66 Glucose level QTL 66 IDA 0.001 6.67 RGD PMID:25003539 RGD:8694157 NCBI chr13:17,711,336...62,711,336 JBrowse link
Q Gluco67 Glucose level QTL 67 IDA 0.001 4.54 RGD PMID:25003539 RGD:8694157 NCBI chr14:1...40,068,101 JBrowse link
Q Gluco68 Glucose level QTL 68 IDA 0.001 7.25 RGD PMID:25003539 RGD:8694157 NCBI chr18:31,990,891...76,990,891 JBrowse link
Q Insul19 Insulin level QTL 19 IDA 4.33 RGD PMID:22947656 RGD:6893578 NCBI chr 1:203,300,512...213,659,238 JBrowse link
Q Rf51 Renal function QTL 51 IDA 2.0E-4 5.3 RGD PMID:10545438 RGD:619628 NCBI chr 1:228,180,370...266,453,608 JBrowse link
Q Scl45 Serum cholesterol level QTL 45 IDA 5.8 RGD PMID:16061941 RGD:1547851 NCBI chr14:65,920,283...99,224,555 JBrowse link
Q Scl59 Serum cholesterol level QTL 59 IDA RGD PMID:18753676 RGD:2300117 NCBI chr14:77,914,838...104,348,525 JBrowse link
Q Sffal1 Serum free fatty acids level QTL 1 IDA 0.0021 3.4 RGD PMID:15728334 RGD:1580752 NCBI chr 7:118,556,868...125,929,417 JBrowse link
Q Sffal2 Serum free fatty acids level QTL 2 IDA 2.0E-4 4.0 RGD PMID:15728334 RGD:1580752 NCBI chr14:96,755,448...100,078,267 JBrowse link
Q Sffal3 Serum free fatty acids level QTL 3 IDA 0.001 6.78 RGD PMID:25003539 RGD:8694157 NCBI chr 2:28,889,991...73,889,991 JBrowse link
Q Sffal4 Serum free fatty acids level QTL 4 IDA 0.05 7.36 RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...32,668,025 JBrowse link
Q Sffal5 Serum free fatty acids level QTL 5 IDA 0.001 8.62 RGD PMID:25003539 RGD:8694157 NCBI chr 7:7,216,097...52,216,097 JBrowse link
Q Sffal6 Serum free fatty acids level QTL 6 IDA 0.001 5.81 RGD PMID:25003539 RGD:8694157
Q Sffal7 Serum free fatty acids level QTL 7 IDA 0.001 4.81 RGD PMID:25003539 RGD:8694157 NCBI chr17:33,104,645...78,104,645 JBrowse link
Q Sffal8 Serum free fatty acids level QTL 8 IDA 0.01 5.32 RGD PMID:25003539 RGD:8694157 NCBI chr20:1...29,193,376 JBrowse link
Q Stl10 Serum triglyceride level QTL 10 IDA 3.57 RGD PMID:14724732 RGD:737686 NCBI chr 4:22,288,453...45,429,897 JBrowse link
Q Stl11 Serum triglyceride level QTL 11 IDA 3.42 RGD PMID:14724732 RGD:737686 NCBI chr 7:121,393,075...137,014,596 JBrowse link
Q Stl12 Serum triglyceride level QTL 12 IDA 3.36 RGD PMID:14724732 RGD:737686
Q Stl20 Serum triglyceride level QTL 20 IDA 0.0033 3.2 RGD PMID:15728334 RGD:1580752
Q Stl21 Serum triglyceride level QTL 21 IDA 0.022 3.1 RGD PMID:15728334 RGD:1580752 NCBI chr15:43,677,244...88,677,244 JBrowse link
Q Uminl1 Urine mineral level QTL 1 IDA 0.001 3.5 RGD PMID:25003539 RGD:8694157 NCBI chr 3:48,657,744...93,657,744 JBrowse link
Q Uminl2 Urine mineral level QTL 2 IDA 0.001 3.96 RGD PMID:25003539 RGD:8694157 NCBI chr 6:44,510,974...89,510,974 JBrowse link
Q Uminl3 Urine mineral level QTL 3 IDA 0.001 3.62 RGD PMID:25003539 RGD:8694157 NCBI chr 8:80,768,445...125,768,445 JBrowse link
Q Uminl4 Urine mineral level QTL 4 IDA 0.001 5.66 RGD PMID:25003539 RGD:8694157 NCBI chr14:59,848,686...104,848,686 JBrowse link
Q Uminl5 Urine mineral level QTL 5 IDA 0.001 3.59 RGD PMID:25003539 RGD:8694157 NCBI chr19:7,997,750...52,997,750 JBrowse link
Lowry protein assay term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA 7.1E-7 6.1 RGD PMID:15668357 RGD:1334448
manually read urine glucose test strip term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iddm15 Insulin dependent diabetes mellitus QTL 15 IDA RGD PMID:11327715 RGD:619685 NCBI chr18:62,892,257...79,484,461 JBrowse link
Q Iddm18 Insulin dependent diabetes mellitus QTL 18 IDA 1.0E-4 RGD PMID:11327715 RGD:619685 NCBI chr 6:122,236,101...147,156,653 JBrowse link
peptide/protein analysis by liquid phase colorimetry term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf2 Renal disease susceptibility QTL 2 IDA 3.7 RGD PMID:8528250 RGD:61060 NCBI chr 1:142,582,180...153,680,016 JBrowse link
protein analysis by liquid phase colorimetry with spectrophotometric readout term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur1 Proteinuria QTL 1 IDA 18.06 RGD PMID:9799838 RGD:619599 NCBI chr13:37,087,983...39,968,353 JBrowse link
Q Pur12 Proteinuria QTL 12 IDA 9.0E-4 5.19 RGD PMID:16390874 RGD:1578625 NCBI chr 2:114,032,149...150,226,270 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA 0.0335 2.93 RGD PMID:16390874 RGD:1578625 NCBI chr 3:98,651,826...167,012,663 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA 1.0E-4 5.3 RGD PMID:16390874 RGD:1578625 NCBI chr17:7,985,243...16,523,460 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA 2.0E-4 4.38 RGD PMID:16390874 RGD:1578625 NCBI chr20:8,043,920...15,089,182 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA 17.2 RGD PMID:18064521 RGD:2292230
Q Pur3 Proteinuria QTL 3 IDA 5.0E-4 2.3 RGD PMID:14638907 RGD:730279
Term paths to the root
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Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      spectrometry 56
        photometry 40
          colorimetry + 40
          flame photometry 0
          free radical elective evaluator photometry 0
          microplate reader 0
paths to the root