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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:photometry
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Accession:MMO:0000704 term browser browse the term
Definition:The measurement of transmittance (a linear scale from 0-100%) or absorbance (a logarithmic scale from zero to infinity) of particular wavelengths of light by the use of filters. Concentration values of solutes are calculated from measured values.
Synonyms:exact_synonym: filter colorimetry


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bromocresol green-based urine albumin analysis with spectrophotometric readout term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf3 Renal disease susceptibility QTL 3 IDA RGD PMID:11053483 RGD:70856 NCBI chr 3:107,693,393...152,693,393 JBrowse link
colorimetry term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl32 Serum triglyceride level QTL 32 IDA RGD PMID:20159938 RGD:7365117 NCBI chr 2:22,384,627...67,384,627 JBrowse link
Q Sual1 Serum uric acid level QTL 1 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:96,127,817...102,200,699 JBrowse link
liquid phase colorimetry term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco65 Glucose level QTL 65 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...37,999,212 JBrowse link
Q Gluco66 Glucose level QTL 66 IDA RGD PMID:25003539 RGD:8694157 NCBI chr13:15,158,722...60,158,722 JBrowse link
Q Gluco67 Glucose level QTL 67 IDA RGD PMID:25003539 RGD:8694157
Q Gluco68 Glucose level QTL 68 IDA RGD PMID:25003539 RGD:8694157 NCBI chr18:29,792,965...74,792,965 JBrowse link
Q Insul19 Insulin level QTL 19 IDA RGD PMID:22947656 RGD:6893578 NCBI chr 1:197,489,281...200,611,765 JBrowse link
Q Rf51 Renal function QTL 51 IDA RGD PMID:10545438 RGD:619628 NCBI chr 1:218,753,816...256,448,513 JBrowse link
Q Scl45 Serum cholesterol level QTL 45 IDA RGD PMID:16061941 RGD:1547851 NCBI chr14:50,023,211...95,023,211 JBrowse link
Q Scl59 Serum cholesterol level QTL 59 IDA RGD PMID:18753676 RGD:2300117 NCBI chr14:55,147,478...100,147,478 JBrowse link
Q Sffal1 Serum free fatty acids level QTL 1 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 7:116,677,010...124,049,952 JBrowse link
Q Sffal2 Serum free fatty acids level QTL 2 IDA RGD PMID:15728334 RGD:1580752 NCBI chr14:92,553,886...95,876,975 JBrowse link
Q Sffal3 Serum free fatty acids level QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:27,157,160...72,157,160 JBrowse link
Q Sffal4 Serum free fatty acids level QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...31,934,116 JBrowse link
Q Sffal5 Serum free fatty acids level QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 7:5,329,019...50,329,019 JBrowse link
Q Sffal6 Serum free fatty acids level QTL 6 IDA RGD PMID:25003539 RGD:8694157
Q Sffal7 Serum free fatty acids level QTL 7 IDA RGD PMID:25003539 RGD:8694157 NCBI chr17:28,409,147...73,409,147 JBrowse link
Q Sffal8 Serum free fatty acids level QTL 8 IDA RGD PMID:25003539 RGD:8694157 NCBI chr20:1...29,191,651 JBrowse link
Q Stl10 Serum triglyceride level QTL 10 IDA RGD PMID:14724732 RGD:737686 NCBI chr 4:21,333,343...44,463,908 JBrowse link
Q Stl11 Serum triglyceride level QTL 11 IDA RGD PMID:14724732 RGD:737686 NCBI chr 7:119,513,385...135,012,528 JBrowse link
Q Stl12 Serum triglyceride level QTL 12 IDA RGD PMID:14724732 RGD:737686 NCBI chr11:66,422,148...86,241,447 JBrowse link
Q Stl20 Serum triglyceride level QTL 20 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:48,630,131...49,147,989 JBrowse link
Q Stl21 Serum triglyceride level QTL 21 IDA RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Uminl1 Urine mineral level QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:28,249,687...73,249,687 JBrowse link
Q Uminl2 Urine mineral level QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:38,783,989...83,783,989 JBrowse link
Q Uminl3 Urine mineral level QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Uminl4 Urine mineral level QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:55,624,247...100,624,247 JBrowse link
Q Uminl5 Urine mineral level QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr19:1...36,824,771 JBrowse link
Lowry protein assay term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr17:40,990,005...85,990,005 JBrowse link
manually read urine glucose test strip term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iddm15 Insulin dependent diabetes mellitus QTL 15 IDA RGD PMID:11327715 RGD:619685 NCBI chr18:60,622,311...77,209,844 JBrowse link
Q Iddm18 Insulin dependent diabetes mellitus QTL 18 IDA RGD PMID:11327715 RGD:619685 NCBI chr 6:116,506,292...130,245,370 JBrowse link
peptide/protein analysis by liquid phase colorimetry term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf2 Renal disease susceptibility QTL 2 IDA RGD PMID:8528250 RGD:61060 NCBI chr 1:99,267,916...144,267,916 JBrowse link
protein analysis by liquid phase colorimetry with spectrophotometric readout term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur1 Proteinuria QTL 1 IDA RGD PMID:9799838 RGD:619599 NCBI chr13:34,535,218...37,415,726 JBrowse link
Q Pur12 Proteinuria QTL 12 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 2:112,103,657...148,076,632 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA RGD PMID:16390874 RGD:1578625 NCBI chr 3:78,196,190...146,592,722 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA RGD PMID:16390874 RGD:1578625 NCBI chr17:7,979,968...16,317,111 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA RGD PMID:16390874 RGD:1578625 NCBI chr20:8,042,410...17,617,956 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA RGD PMID:18064521 RGD:2292230 NCBI chr13:36,155,723...41,961,389 JBrowse link
Q Pur3 Proteinuria QTL 3 IDA RGD PMID:14638907 RGD:730279 NCBI chr15:1...41,686,771 JBrowse link
Term paths to the root
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Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      spectrometry 56
        photometry 40
          colorimetry + 40
          flame photometry 0
          free radical elective evaluator photometry 0
          microplate reader 0
paths to the root