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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:molecular method
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Accession:MMO:0000639 term browser browse the term
Definition:Any method to determine the nature, properties, or composition of a sample at a subcellular, molecular, atomic or subatomic level.



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electrophoresis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl62 Serum cholesterol level QTL 62 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:1...38,710,544 JBrowse link
Q Scl63 Serum cholesterol level QTL 63 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:98,535,255...168,026,850 JBrowse link
Q Scl64 Serum cholesterol level QTL 64 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 5:68,984,307...104,251,008 JBrowse link
Q Scl65 Serum cholesterol level QTL 65 IDA RGD PMID:19584880 RGD:2312642 NCBI chr10:57,134,272...102,134,272 JBrowse link
Q Stl23 Serum triglyceride level QTL 23 IDA RGD PMID:19584880 RGD:2312642 NCBI chr16:832,236...59,492,508 JBrowse link
ex vivo light microscopy with immunohistochemistry and digital image analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gcr3 Gastric cancer resistance QTL 3 IDA RGD PMID:10706129 RGD:69698 NCBI chr16:17,696,791...82,635,055 JBrowse link
Q Lnnr1 Liver neoplastic nodule remodeling QTL 1 IDA RGD PMID:12672032 RGD:629574 NCBI chr 7:34,293,282...79,293,282 JBrowse link
Q Lnnr2 Liver neoplastic nodule remodeling QTL 2 IDA RGD PMID:12672032 RGD:629574 NCBI chr 1:233,948,574...260,522,016 JBrowse link
Q Neuinf4 Neuroinflammation QTL 4 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 1:1...28,736,750 JBrowse link
Q Neuinf5 Neuroinflammation QTL 5 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:9,462,246...58,265,113 JBrowse link
Q Neuinf6 Neuroinflammation QTL 6 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 7:1...27,829,089 JBrowse link
Q Neuinf7 Neuroinflammation QTL 7 IDA RGD PMID:19525015 RGD:2311085 NCBI chr10:72,224,939...107,211,142 JBrowse link
high-performance liquid chromatography term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cstrr1 Cold stress response QTL 1 IDA RGD PMID:15480093 RGD:1302892 NCBI chr 1:123,350,408...182,418,476 JBrowse link
Q Cstrr2 Cold stress response QTL 2 IDA RGD PMID:21063213 RGD:4889147 NCBI chr 1:155,866,514...158,592,016 JBrowse link
Q Rf54 Renal function QTL 54 IDA RGD PMID:16396943 RGD:1578407 NCBI chr 5:128,033,842...133,011,550 JBrowse link
Q Scl69 Serum cholesterol level QTL 69 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:20,714,090...65,714,090 JBrowse link
Q Scl70 Serum cholesterol level QTL 70 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:20,714,090...65,714,090 JBrowse link
Q Scl71 Serum cholesterol level QTL 71 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,192,455...27,494,778 JBrowse link
Q Scl72 Serum cholesterol level QTL 72 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,192,455...27,494,778 JBrowse link
Q Scl73 Serum cholesterol level QTL 73 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:24,192,455...27,494,778 JBrowse link
Q Scl74 Serum cholesterol level QTL 74 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:38,192,233...50,749,747 JBrowse link
Q Scl75 Serum cholesterol level QTL 75 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:38,192,233...50,749,747 JBrowse link
Q Scl76 Serum cholesterol level QTL 76 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:49,178,116...57,114,705 JBrowse link
Q Scl77 Serum cholesterol level QTL 77 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:49,178,116...57,114,705 JBrowse link
Q Scl78 Serum cholesterol level QTL 78 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 4:49,178,116...57,114,705 JBrowse link
Q Scl79 Serum cholesterol level QTL 79 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 7:89,867,376...101,773,158 JBrowse link
Q Scl80 Serum cholesterol level QTL 80 IDA RGD PMID:25296178 RGD:10402111 NCBI chr11:76,957,131...83,051,965 JBrowse link
Q Stl33 Serum triglyceride level QTL 33 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 3:38,192,233...50,749,747 JBrowse link
Q Stl34 Serum triglyceride level QTL 34 IDA RGD PMID:25296178 RGD:10402111
real-time polymerase chain reaction assay term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Neuinf10 Neuroinflammation QTL 10 IDA RGD PMID:19525015 RGD:2311085 NCBI chr11:31,239,134...78,851,519 JBrowse link
Q Neuinf11 Neuroinflammation QTL 11 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 3:15,005,422...76,927,699 JBrowse link
Q Neuinf12 Neuroinflammation QTL 12 IDA RGD PMID:19525015 RGD:2311085 NCBI chr15:1...55,302,115 JBrowse link
Q Neuinf8 Neuroinflammation QTL 8 IDA RGD PMID:19525015 RGD:2311085 NCBI chr 1:57,336,763...151,090,257 JBrowse link
Q Neuinf9 Neuroinflammation QTL 9 IDA RGD PMID:19525015 RGD:2311085 NCBI chr10:5,801,990...62,146,030 JBrowse link

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  measurement method 2368
    molecular method 34
      expression assay + 12
      molecular separation method + 22
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