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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:protein analysis by liquid phase colorimetry with spectrophotometric readout
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Accession:MMO:0000331 term browser browse the term
Definition:Method of assessing the amount of one or more proteins, complex high molecular weight organic compounds containing carbon, hydrogen, oxygen, nitrogen, and sulfur consisting of alpha-amino acids joined by peptide linkages, in a solution using a technique in which the color of that solution, usually after a chemical or enzymatic reaction, is evaluated based on its ability to alter the transmission of light at specific wavelengths in the visible spectrum, that is, to alter the transmission of a specific color of light, using a spectrophotometer.


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protein analysis by liquid phase colorimetry with spectrophotometric readout term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pur1 Proteinuria QTL 1 IDA 18.06 RGD PMID:9799838 RGD:619599 NCBI chr13:37,087,983...39,968,353 JBrowse link
Q Pur12 Proteinuria QTL 12 IDA 9.0E-4 5.19 RGD PMID:16390874 RGD:1578625 NCBI chr 2:114,032,149...150,226,270 JBrowse link
Q Pur13 Proteinuria QTL 13 IDA 0.0335 2.93 RGD PMID:16390874 RGD:1578625 NCBI chr 3:98,651,826...167,012,663 JBrowse link
Q Pur14 Proteinuria QTL 14 IDA 1.0E-4 5.3 RGD PMID:16390874 RGD:1578625 NCBI chr17:7,985,243...16,523,460 JBrowse link
Q Pur15 Proteinuria QTL 15 IDA 2.0E-4 4.38 RGD PMID:16390874 RGD:1578625 NCBI chr20:8,043,920...15,089,182 JBrowse link
Q Pur16 Proteinuria QTL 16 IDA 17.2 RGD PMID:18064521 RGD:2292230
Q Pur3 Proteinuria QTL 3 IDA 5.0E-4 2.3 RGD PMID:14638907 RGD:730279
bromocresol green-based urine albumin analysis with spectrophotometric readout term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf3 Renal disease susceptibility QTL 3 IDA 0.001 6.5 RGD PMID:11053483 RGD:70856
Lowry protein assay term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA 7.1E-7 6.1 RGD PMID:15668357 RGD:1334448
Term paths to the root
Path 1
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      spectrometry 56
        spectrophotometry 21
          protein analysis by liquid phase colorimetry with spectrophotometric readout 9
            Bradford protein assay 0
            Lowry protein assay 1
            automated bromocresol green-based plasma albumin analysis with spectrophotometric readout 0
            bicinchoninic acid protein assay 0
            bromocresol green-based urine albumin analysis with spectrophotometric readout 1
Path 2
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      spectrometry 56
        photometry 40
          colorimetry 40
            liquid phase colorimetry 36
              peptide/protein analysis by liquid phase colorimetry 10
                protein analysis by liquid phase colorimetry with spectrophotometric readout 9
                  Bradford protein assay 0
                  Lowry protein assay 1
                  automated bromocresol green-based plasma albumin analysis with spectrophotometric readout 0
                  bicinchoninic acid protein assay 0
                  bromocresol green-based urine albumin analysis with spectrophotometric readout 1
paths to the root