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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:movement/behavior test maze method
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Accession:MMO:0000257 term browser browse the term
Definition:A method that utilizes an experimental apparatus made up of multiple components which requires that an experimental subject makes a choice or a series of choices and/or learn a specific solution to a problem. Used to test movement or behavior of an organism.


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arm(s) of elevated plus maze apparatus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr4 Anxiety related response QTL 4 IDA RGD PMID:14739700 RGD:737695 NCBI chr 5:136,354,114...173,707,219 JBrowse link
Q Anxrr7 Anxiety related response QTL 7 IDA RGD PMID:14739700 RGD:737695 NCBI chr 2:123,456,539...168,456,539 JBrowse link
Q Anxrr8 Anxiety related response QTL 8 IDA RGD PMID:14739700 RGD:737695 NCBI chr 7:54,259,512...99,259,512 JBrowse link
Q Anxrr9 Anxiety related response QTL 9 IDA RGD PMID:14739700 RGD:737695 NCBI chr 8:102,051,964...133,307,652 JBrowse link
center of elevated plus maze apparatus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr12 Anxiety related response QTL 12 IDA RGD PMID:12972953 RGD:731213 NCBI chr 1:141,296,374...186,296,374 JBrowse link
Q Anxrr15 Anxiety related response QTL 15 IDA RGD PMID:12972953 RGD:731213 NCBI chr 8:104,682,575...133,307,652 JBrowse link
elevated plus maze apparatus method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr54 Anxiety related response QTL 54 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:112,807,675...157,807,675 JBrowse link
enclosed arm of elevated plus maze apparatus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr10 Anxiety related response QTL 10 IDA RGD PMID:14739700 RGD:737695 NCBI chr 3:40,422,921...85,422,921 JBrowse link
Q Anxrr11 Anxiety related response QTL 11 IDA RGD PMID:14739700 RGD:737695 NCBI chr18:31,608,424...76,608,424 JBrowse link
Morris water maze method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Despr1 Despair related QTL 1 IDA RGD PMID:15457344 RGD:1302894
Q Despr10 Despair related QTL 10 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 2:119,789,823...164,789,823 JBrowse link
Q Despr11 Despair related QTL 11 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 3:29,908,255...74,908,255 JBrowse link
Q Despr12 Despair related QTL 12 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 6:1...35,623,029 JBrowse link
Q Despr13 Despair related QTL 13 IDA RGD PMID:15457344 RGD:1302894 NCBI chr15:1...30,597,196 JBrowse link
Q Despr14 Despair related QTL 14 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 8:10,388,439...55,388,439 JBrowse link
Q Despr15 Despair related QTL 15 IDA RGD PMID:15457344 RGD:1302894 NCBI chr20:1...24,652,101 JBrowse link
Q Despr2 Despair related QTL 2 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 3:102,466,149...147,466,149 JBrowse link
Q Despr3 Despair related QTL3 IDA RGD PMID:15457344 RGD:1302894
Q Despr4 Despair related QTL 4 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 8:10,388,439...55,388,439 JBrowse link
Q Despr5 Despair related QTL 5 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 9:4,986,095...49,986,095 JBrowse link
Q Despr6 Despair related QTL 6 IDA RGD PMID:15457344 RGD:1302894 NCBI chr16:1...41,240,937 JBrowse link
Q Despr7 Despair related QTL 7 IDA RGD PMID:15457344 RGD:1302894 NCBI chr16:1,728,297...46,728,297 JBrowse link
Q Despr8 Despair related QTL 8 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 1:1...24,368,159 JBrowse link
Q Despr9 Despair related QTL 9 IDA RGD PMID:15457344 RGD:1302894 NCBI chr 1:185,390,068...230,390,068 JBrowse link
Q Memor1 Memory QTL 1 IDA RGD PMID:14665699 RGD:1581736 NCBI chr  X:110,957,467...155,957,467 JBrowse link
Q Memor10 Memory QTL 10 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 3:153,412,455...170,534,769 JBrowse link
Q Memor11 Memory QTL 11 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 9:41,261,034...90,024,806 JBrowse link
Q Memor12 Memory QTL 12 IDA RGD PMID:16837653 RGD:1581615 NCBI chr20:4,108,956...49,108,956 JBrowse link
Q Memor18 Memory QTL 18 IDA RGD PMID:23469157 RGD:7394833 NCBI chr17:61,355,300...67,004,384 JBrowse link
Q Memor19 Memory QTL 19 IDA RGD PMID:23861781 RGD:7495755 NCBI chr 2:183,864,092...187,196,901 JBrowse link
Q Memor2 Memory QTL 2 IDA RGD PMID:14665699 RGD:1581736 NCBI chr  X:21,592,623...44,320,739 JBrowse link
Q Memor3 Memory QTL 3 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 1:153,834,077...232,297,227 JBrowse link
Q Memor4 Memory QTL 4 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 8:11,373,267...57,541,668 JBrowse link
Q Memor5 Memory QTL 5 IDA RGD PMID:16837653 RGD:1581615 NCBI chr17:42,541,872...85,446,768 JBrowse link
Q Memor6 Memory QTL 6 IDA RGD PMID:16837653 RGD:1581615 NCBI chr20:30,913,481...56,205,956 JBrowse link
Q Memor7 Memory QTL 7 IDA RGD PMID:16837653 RGD:1581615 NCBI chr11:21,944,229...66,944,229 JBrowse link
Q Memor8 Memory QTL 8 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 2:157,914,311...204,022,555 JBrowse link
Q Memor9 Memory QTL 9 IDA RGD PMID:16837653 RGD:1581615 NCBI chr 2:214,870,793...251,212,353 JBrowse link
open arm of elevated plus maze apparatus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr14 Anxiety related response QTL 14 IDA RGD PMID:12972953 RGD:731213 NCBI chr 1:141,296,374...186,296,374 JBrowse link
Q Anxrr3 Anxiety related response QTL 3 IDA RGD PMID:14739700 RGD:737695 NCBI chr 2:7,893,600...52,893,600 JBrowse link
Q Anxrr5 Anxiety related response QTL 5 IDA RGD PMID:14739700 RGD:737695 NCBI chr 6:88,507,712...133,507,712 JBrowse link
Q Anxrr56 Anxiety related response QTL 56 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:86,312,589...147,702,403 JBrowse link
Q Anxrr57 Anxiety related response QTL 57 IDA RGD PMID:27044679 RGD:11566049 NCBI chr 4:146,086,918...168,047,091 JBrowse link
Q Anxrr6 Anxiety related response QTL 6 IDA RGD PMID:14739700 RGD:737695 NCBI chr 7:22,168,412...67,168,412 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  measurement method 2368
    in vivo method 1105
      body movement/behavior method 104
        movement/behavior test apparatus method 90
          movement/behavior test maze method 44
            Barnes circular maze test 0
            Morris water maze method 29
            elevated T-maze apparatus method + 0
            elevated Y-maze apparatus method 0
            elevated plus maze apparatus method + 15
            elevated zero maze apparatus method + 0
paths to the root