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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:ex vivo volume measurement method
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Accession:MMO:0000212 term browser browse the term
Definition:Any instrument, procedure, or technique by which the size of the three dimensional space occupied by a substance or other entity distinct from or removed from an organism, is ascertained.


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ex vivo volume measurement method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc19 Alcohol consumption QTL 19 IDA RGD PMID:9880658 RGD:69704 NCBI chr 3:1...27,494,778 JBrowse link
Q Alc20 Alcohol consumption QTL 20 IDA RGD PMID:9880658 RGD:69704 NCBI chr 8:30,848,154...40,713,225 JBrowse link
Q Alc4 Alcohol consumption QTL 4 IDA RGD PMID:10979603 RGD:631230 NCBI chr 5:8,187,501...18,616,199 JBrowse link
Q Alc5 Alcohol consumption QTL 5 IDA RGD PMID:10979603 RGD:631230 NCBI chr10:5,144,027...17,245,662 JBrowse link
Q Alc6 Alcohol consumption QTL 6 IDA RGD PMID:10979603 RGD:631230 NCBI chr12:28,607,526...37,691,617 JBrowse link
Q Alc9 Alcohol consumption QTL 9 IDA RGD PMID:14634485 RGD:731212 NCBI chr10:5,144,027...19,233,348 JBrowse link
Q Cari1 Carrageenan-induced inflammation QTL 1 IDA RGD PMID:10087293 RGD:69693 NCBI chr10:53,797,385...107,211,142 JBrowse link
Q Cari2 Carrageenan-induced inflammation QTL 2 IDA RGD PMID:10087293 RGD:69693 NCBI chr 2:141,596,551...202,447,032 JBrowse link
Q Rf50 Renal function QTL 50 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 2:53,822,747...74,786,777 JBrowse link
Q Sach1 Saccharin preference QTL 1 IDA RGD PMID:11958543 RGD:631229 NCBI chr 3:27,494,621...44,188,411 JBrowse link
Q Sach2 Saccharin preference QTL 2 IDA RGD PMID:11958543 RGD:631229 NCBI chr16:43,024,842...50,166,018 JBrowse link
Q Sach3 Saccharin preference QTL 3 IDA RGD PMID:11958543 RGD:631229 NCBI chr18:58,805,687...63,636,873 JBrowse link
calibrated Mohr pipette method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Sach6 Saccharin preference QTL 6 IDA RGD PMID:11958542 RGD:631221 NCBI chr 2:112,456,140...212,696,837 JBrowse link
Q Sach7 Saccharin preference QTL 7 IDA RGD PMID:11958542 RGD:631221 NCBI chr 4:57,114,432...102,114,432 JBrowse link
fluorescence-activated cell sorting method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cdexp1 CD45RC expression in CD8 T cells QTL 1 IDA RGD PMID:15322174 RGD:1302824 NCBI chr 9:1,024,537...67,509,080 JBrowse link
Q Cdexp2 CD45RC expression in CD8 T cells QTL 2 IDA RGD PMID:15322174 RGD:1302824 NCBI chr20:3,621,649...10,078,919 JBrowse link
Q Tls1 T-lymphoma susceptibility QTL 1 IDA RGD PMID:10360666 RGD:619600 NCBI chr 5:90,450,144...135,450,144 JBrowse link
Q Tls2 T-lymphoma susceptibility QTL 2 IDA RGD PMID:10360666 RGD:619600 NCBI chr 7:80,221,299...109,401,111 JBrowse link
Q Tls3 T-lymphoma susceptibility QTL 3 IDA RGD PMID:10360666 RGD:619600 NCBI chr10:51,774,612...95,600,334 JBrowse link
Richter feeding tube term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc18 Alcohol consumption QTL 18 IDA RGD PMID:9880658 RGD:69704 NCBI chr 4:56,647,873...149,491,524 JBrowse link
Q Alc21 Alcohol consumption QTL 21 IDA RGD PMID:9660316 RGD:61483 NCBI chr 4:56,698,790...126,192,555 JBrowse link
Q Alc22 Alcohol consumption QTL 22 IDA RGD PMID:16470346 RGD:1578304 NCBI chr 4:81,192,555...126,192,555 JBrowse link
urine volume measurement method term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf18 Renal function QTL 18 IDA RGD PMID:14532335 RGD:727992 NCBI chr10:78,775,516...98,279,596 JBrowse link
Q Rf39 Renal function QTL 39 IDA RGD PMID:11721057 RGD:70849 NCBI chr 8:41,866,876...75,097,878 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo volume measurement method 24
        Richter feeding tube 3
        ex vivo volume measurement calculated from measurement of weight + 0
        graduated cylinder 0
        isolated cell volume measurement method + 5
        metabolic cage water drinking measurement method 0
        pipette method + 2
        urine volume measurement method + 2
paths to the root