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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:serum total cholesterol measurement test
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Accession:MMO:0000132 term browser browse the term
Definition:A test which determines total amount of cholesterol carried in high-density lipoprotein (HDL), low-density lipoprotein (LDL) and very-low-density lipoprotein (VLDL) molecules in a volume of serum, the clear liquid that separates from blood after it has clotted completely, i.e. blood plasma from which fibrinogen has been removed.


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serum total cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl1 Serum cholesterol level QTL 1 IDA RGD PMID:10634822 RGD:61092 NCBI chr15:16,725,528...80,672,115 JBrowse link
Q Scl2 Serum cholesterol level QTL 2 IDA RGD PMID:10634822 RGD:61092 NCBI chr 5:59,793,399...143,070,159 JBrowse link
Q Scl22 Serum cholesterol level QTL 22 IDA RGD PMID:9199194 RGD:61055 NCBI chr18:11,941,791...31,393,320 JBrowse link
Q Scl25 Serum cholesterol level QTL 25 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:94,494,440...117,601,394 JBrowse link
Q Scl26 Serum cholesterol level QTL 26 IDA RGD PMID:11721057 RGD:70849 NCBI chr 5:43,726,656...86,724,018 JBrowse link
Q Scl29 Serum cholesterol level QTL 29 IDA RGD PMID:14724732 RGD:737686 NCBI chr 6:35,098,709...71,636,405 JBrowse link
Q Scl3 Serum cholesterol level QTL 3 IDA RGD PMID:10634822 RGD:61092 NCBI chr 7:44,867,533...89,867,533 JBrowse link
Q Scl44 Serum cholesterol level QTL 44 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 5:40,128,307...148,607,290 JBrowse link
Q Scl46 Serum cholesterol level QTL 46 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 4:132,396,220...177,396,220 JBrowse link
Q Scl47 Serum cholesterol level QTL 47 IDA RGD PMID:16061941 RGD:1547851 NCBI chr10:50,574,707...95,574,707 JBrowse link
Q Scl48 Serum cholesterol level QTL 48 IDA RGD PMID:16061941 RGD:1547851 NCBI chr12:9,603,277...46,669,029 JBrowse link

Related Phenotype Data for Term "serum total cholesterol measurement test" (MMO:0000132)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Term paths to the root
Path 1
Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo biological fluid analysis 305
        ex vivo blood analysis 250
          blood lipid analysis 57
            blood sterol analysis 36
              blood cholesterol analysis 36
                blood total cholesterol measurement test 31
                  serum total cholesterol measurement test 11
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