Term: Cerebral calcification
Accession: HP:0002514
browse the term
Definition: The presence of calcium deposition within the cerebrum.
Comment: This finding can be demonstrated upon cerebral computer tomography, magnetic resonance imaging, or potentially by standard radiography of the skull. The cerebrum is the largest of the five major components of the brain, which comprise the cerebrum, cerebellum, brain stem, pituitary gland, and hypothalamus.
Synonyms: exact_synonym: Abnormal deposits of calcium in the brain
alt_id: HP:0002502; HP:0005806; HP:0006848
xref: SNOMEDCT_US:17944005; UMLS:C0270685
G
ABCC6
ATP binding cassette subfamily C member 6
IAGP
HPO
ORPHA:51608 ORPHA:758
NCBI chr16:16,149,565...16,223,494
Ensembl chr16:16,149,565...16,223,522
G
ACD
ACD shelterin complex subunit and telomerase recruitment factor
IAGP
HPO
ORPHA:3322
NCBI chr16:67,657,512...67,660,260
Ensembl chr16:67,657,512...67,660,810
G
ACP5
acid phosphatase 5, tartrate resistant
IAGP
HPO
OMIM:607944 ORPHA:1855
NCBI chr19:11,574,660...11,578,975
Ensembl chr19:11,574,653...11,579,993
G
ADAR
adenosine deaminase RNA specific
IAGP
HPO
OMIM:615010 ORPHA:51
NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013
G
AIRE
autoimmune regulator
IAGP
HPO
ORPHA:3453
NCBI chr21:44,285,876...44,298,648
Ensembl chr21:44,285,838...44,298,648
G
AMER1
APC membrane recruitment protein 1
IAGP
HPO
ORPHA:2780
NCBI chr X:64,185,117...64,205,708
Ensembl chr X:64,185,117...64,205,708
G
AP1S2
adaptor related protein complex 1 subunit sigma 2
IAGP
HPO
OMIM:304340 ORPHA:85335
NCBI chr X:15,825,806...15,854,813
Ensembl chr X:15,825,806...15,854,931
G
APP
amyloid beta precursor protein
IAGP
HPO
ORPHA:100006
NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,535...26,171,128
G
ATP7A
ATPase copper transporting alpha
IAGP
HPO
ORPHA:198
NCBI chr X:77,910,693...78,050,395
Ensembl chr X:77,910,690...78,050,395
G
BRAF
B-Raf proto-oncogene, serine/threonine kinase
IAGP
HPO
ORPHA:54595
NCBI chr 7:140,713,328...140,924,929
Ensembl chr 7:140,719,327...140,924,929
G
CA2
carbonic anhydrase 2
IAGP
HPO
OMIM:259730 ORPHA:2785
NCBI chr 8:85,464,007...85,481,493
Ensembl chr 8:85,463,968...85,481,493
G
CLCNKB
chloride voltage-gated channel Kb
IAGP
HPO
ORPHA:358
NCBI chr 1:16,043,782...16,057,326
Ensembl chr 1:16,040,252...16,057,311
G
COL11A1
collagen type XI alpha 1 chain
IAGP
HPO
ORPHA:560
NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872
G
COL2A1
collagen type II alpha 1 chain
IAGP
HPO
ORPHA:85198
NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
G
COL4A1
collagen type IV alpha 1 chain
IAGP
ClinVar Annotator: match by term: Cerebral calcification
ClinVar
PMID:7695699 PMID:8218237 PMID:9016532 PMID:16598045 PMID:17078022 PMID:17938367 PMID:19344236 PMID:22102590 PMID:25741868 PMID:26362372 PMID:28492532 PMID:31857254 PMID:32033901 More...
NCBI chr13:110,148,963...110,307,157
Ensembl chr13:110,148,963...110,307,157
G
COLGALT1
collagen beta(1-O)galactosyltransferase 1
IAGP
HPO
OMIM:618360
NCBI chr19:17,555,649...17,583,157
Ensembl chr19:17,555,649...17,583,162
G
CPT2
carnitine palmitoyltransferase 2
IAGP
HPO
ORPHA:228308
NCBI chr 1:53,196,824...53,214,197
Ensembl chr 1:53,196,792...53,214,197
G
CSF1R
colony stimulating factor 1 receptor
IAGP
HPO
OMIM:618476
NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
G
CTC1
CST telomere replication complex component 1
IAGP
HPO
OMIM:612199 ORPHA:1775
NCBI chr17:8,224,815...8,248,056
Ensembl chr17:8,224,815...8,248,058
G
CTNNB1
catenin beta 1
IAGP
HPO
ORPHA:54595
NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096
G
CTNS
cystinosin, lysosomal cystine transporter
IAGP
HPO
OMIM:219800
NCBI chr17:3,636,459...3,663,103
Ensembl chr17:3,636,459...3,663,103
G
CTSC
cathepsin C
IAGP
HPO
ORPHA:678
NCBI chr11:88,293,592...88,337,736
Ensembl chr11:88,265,069...88,359,684
G
DAG1
dystroglycan 1
IAGP
HPO
OMIM:616538
NCBI chr 3:49,468,948...49,535,615
Ensembl chr 3:49,468,713...49,535,618
G
DENND5A
DENN domain containing 5A
IAGP
HPO
OMIM:617281
NCBI chr11:9,138,825...9,265,350
Ensembl chr11:9,138,825...9,265,959
G
DKC1
dyskerin pseudouridine synthase 1
IAGP
HPO
ORPHA:1775 ORPHA:3322
NCBI chr X:154,762,864...154,777,689
Ensembl chr X:154,762,742...154,777,689
G
ECM1
extracellular matrix protein 1
IAGP
HPO
ORPHA:530
NCBI chr 1:150,508,109...150,513,789
Ensembl chr 1:150,508,062...150,513,789
G
ENPP1
ectonucleotide pyrophosphatase/phosphodiesterase 1
IAGP
HPO
ORPHA:51608 ORPHA:758
NCBI chr 6:131,808,020...131,895,155
Ensembl chr 6:131,808,016...131,895,155
G
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
IAGP
HPO
ORPHA:1466
NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
G
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit
IAGP
HPO
ORPHA:1466
NCBI chr19:45,349,837...45,370,573
Ensembl chr19:45,349,837...45,370,918
G
ERCC5
ERCC excision repair 5, endonuclease
IAGP
HPO
ORPHA:1466
NCBI chr13:102,846,032...102,875,995
Ensembl chr13:102,845,831...102,875,995
G
ERCC6
ERCC excision repair 6, chromatin remodeling factor
IAGP
HPO
ORPHA:1466
NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538
G
FAM20C
FAM20C golgi associated secretory pathway kinase
IAGP
HPO
OMIM:259775
NCBI chr 7:192,571...260,772
Ensembl chr 7:192,571...260,772
G
FARSB
phenylalanyl-tRNA synthetase subunit beta
IAGP
ClinVar Annotator: match by term: Intracranial calcifications
ClinVar HPO
PMID:29979980
OMIM:613658
NCBI chr 2:222,566,899...222,656,092
Ensembl chr 2:222,566,899...222,656,092
G
FGFR1
fibroblast growth factor receptor 1
IAGP
HPO
ORPHA:2396
NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834
G
GJA1
gap junction protein alpha 1
IAGP
HPO
ORPHA:2710
NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
G
GNAQ
G protein subunit alpha q
IAGP
HPO
ORPHA:3205 ORPHA:624
NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
G
GNAS
GNAS complex locus
IAGP
HPO
ORPHA:79443 ORPHA:79444
NCBI chr20:58,839,748...58,911,192
Ensembl chr20:58,839,718...58,911,192
G
HLA-DQA1
major histocompatibility complex, class II, DQ alpha 1
IAGP
HPO
OMIM:212750
NCBI chr 6:32,637,406...32,655,272
Ensembl chr 6:32,628,179...32,647,062
G
HLA-DQB1
major histocompatibility complex, class II, DQ beta 1
IAGP
HPO
OMIM:212750
NCBI chr 6:32,659,467...32,666,657
Ensembl chr 6:32,659,467...32,668,383
G
HRAS
HRas proto-oncogene, GTPase
IAGP
HPO
ORPHA:2612
NCBI chr11:532,242...535,576
Ensembl chr11:532,242...537,321
G
IFIH1
interferon induced with helicase C domain 1
IAGP
HPO
ORPHA:51
NCBI chr 2:162,267,074...162,318,684
Ensembl chr 2:162,267,074...162,318,684
G
IFNG
interferon gamma
IAGP
HPO
OMIM:613254
NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
G
IRF8
interferon regulatory factor 8
IAGP
HPO
OMIM:226990
NCBI chr16:85,899,162...85,922,609
Ensembl chr16:85,899,116...85,922,606
G
JAM2
junctional adhesion molecule 2
IAGP
HPO
ORPHA:1980
NCBI chr21:25,639,258...25,717,562
Ensembl chr21:25,639,258...25,717,562
G
KARS1
lysyl-tRNA synthetase 1
IAGP
HPO
OMIM:619147
NCBI chr16:75,627,724...75,647,665
Ensembl chr16:75,627,474...75,648,643
G
KATNB1
katanin regulatory subunit B1
IAGP
HPO
ORPHA:89844
NCBI chr16:57,735,770...57,757,244
Ensembl chr16:57,735,739...57,757,244
G
KL
klotho
IAGP
HPO
OMIM:617994
NCBI chr13:33,016,243...33,066,143
Ensembl chr13:33,016,423...33,066,143
G
KRAS
KRAS proto-oncogene, GTPase
IAGP
HPO
ORPHA:2396 ORPHA:2612
NCBI chr12:25,205,246...25,250,929
Ensembl chr12:25,205,246...25,250,936
G
KRIT1
KRIT1 ankyrin repeat containing
IAGP
HPO
OMIM:116860
NCBI chr 7:92,198,969...92,246,100
Ensembl chr 7:92,197,498...92,246,166
G
LSM11
LSM11, U7 small nuclear RNA associated
IAGP
HPO
ORPHA:51
NCBI chr 5:157,743,712...157,760,709
Ensembl chr 5:157,743,712...157,760,709
G
MGP
matrix Gla protein
IAGP
HPO
OMIM:245150
NCBI chr12:14,880,864...14,885,854
Ensembl chr12:14,880,864...14,885,857
G
MYMK
myomaker, myoblast fusion factor
IAGP
HPO
ORPHA:1358
NCBI chr 9:133,514,586...133,524,959
Ensembl chr 9:133,514,586...133,528,612
G
MYMX
myomixer, myoblast fusion factor
IAGP
HPO
ORPHA:1358
NCBI chr 6:44,192,721...44,218,234
Ensembl chr 6:44,216,926...44,218,234
G
MYO5A
myosin VA
IAGP
HPO
ORPHA:79476
NCBI chr15:52,307,283...52,529,050
Ensembl chr15:52,307,281...52,529,132
G
MYORG
myogenesis regulating glycosidase (putative)
IAGP
HPO
ORPHA:1980
NCBI chr 9:34,366,666...34,376,898
Ensembl chr 9:34,366,666...34,376,898
G
NDE1
nudE neurodevelopment protein 1
IAGP
HPO
ORPHA:89844
NCBI chr16:15,643,382...15,726,353
Ensembl chr16:15,643,267...15,734,691
G
NHP2
NHP2 ribonucleoprotein
IAGP
HPO
OMIM:613987 ORPHA:1775
NCBI chr 5:178,149,463...178,153,885
Ensembl chr 5:178,149,463...178,153,894
G
NOP10
NOP10 ribonucleoprotein
IAGP
HPO
ORPHA:1775
NCBI chr15:34,341,719...34,343,136
Ensembl chr15:34,339,159...34,343,180
G
NPM1
nucleophosmin 1
IAGP
HPO
ORPHA:1775
NCBI chr 5:171,387,116...171,410,900
Ensembl chr 5:171,387,116...171,411,810
G
NRAS
NRAS proto-oncogene, GTPase
IAGP
HPO
ORPHA:2612
NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
G
NSMCE3
NSE3 homolog, SMC5-SMC6 complex component
IAGP
HPO
OMIM:617241
NCBI chr15:29,264,989...29,269,822
Ensembl chr15:29,264,989...29,269,822
G
OCLN
occludin
IAGP
HPO
OMIM:251290 ORPHA:1229
NCBI chr 5:69,492,547...69,558,104
Ensembl chr 5:69,492,292...69,558,104
G
ODC1
ornithine decarboxylase 1
IAGP
HPO
OMIM:619075
NCBI chr 2:10,439,968...10,448,327
Ensembl chr 2:10,439,968...10,448,327
G
PAH
phenylalanine hydroxylase
IAGP
HPO
OMIM:261600 ORPHA:79254
NCBI chr12:102,836,889...102,958,441
Ensembl chr12:102,836,889...102,958,410
G
PARN
poly(A)-specific ribonuclease
IAGP
HPO
ORPHA:1775 ORPHA:3322
NCBI chr16:14,435,701...14,630,260
Ensembl chr16:14,435,700...14,632,728
G
PDGFB
platelet derived growth factor subunit B
IAGP
HPO
OMIM:615483 ORPHA:1980
NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
G
PDGFRB
platelet derived growth factor receptor beta
IAGP
HPO
ORPHA:1980
NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
G
PEX1
peroxisomal biogenesis factor 1
IAGP
HPO
ORPHA:3220
NCBI chr 7:92,487,025...92,528,520
Ensembl chr 7:92,487,020...92,528,520
G
PEX6
peroxisomal biogenesis factor 6
IAGP
HPO
ORPHA:3220
NCBI chr 6:42,963,865...42,979,181
Ensembl chr 6:42,963,865...42,979,181
G
POT1
protection of telomeres 1
IAGP
HPO
OMIM:620368
NCBI chr 7:124,822,386...124,929,825
Ensembl chr 7:124,822,386...124,929,983
G
PPFIBP1
PPFIA binding protein 1
IAGP
ClinVar Annotator: match by term: Cerebral calcification
ClinVar HPO
PMID:25741868 PMID:35830857
OMIM:620024
NCBI chr12:27,524,206...27,695,564
Ensembl chr12:27,523,431...27,695,564
G
PTCH1
patched 1
IAGP
HPO
ORPHA:377
NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
G
PTCH2
patched 2
IAGP
HPO
ORPHA:377
NCBI chr 1:44,819,845...44,843,253
Ensembl chr 1:44,819,844...44,843,253
G
PTH
parathyroid hormone
IAGP
HPO
OMIM:146200
NCBI chr11:13,492,054...13,496,181
Ensembl chr11:13,492,054...13,496,181
G
QDPR
quinoid dihydropteridine reductase
IAGP
HPO
OMIM:261630
NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206
G
RELN
reelin
IAGP
HPO
ORPHA:89844
NCBI chr 7:103,471,789...103,989,658
Ensembl chr 7:103,471,381...103,989,658
G
RNASEH2A
ribonuclease H2 subunit A
IAGP
HPO
OMIM:610333 ORPHA:51
NCBI chr19:12,806,584...12,813,640
Ensembl chr19:12,806,584...12,813,640
G
RNASEH2B
ribonuclease H2 subunit B
IAGP
HPO
ORPHA:51
NCBI chr13:50,909,678...50,970,460
Ensembl chr13:50,909,747...51,024,120
G
RNASEH2C
ribonuclease H2 subunit C
IAGP
HPO
OMIM:610329 ORPHA:51
NCBI chr11:65,717,673...65,720,798
Ensembl chr11:65,714,005...65,720,818
G
RNASET2
ribonuclease T2
IAGP
HPO
OMIM:612951
NCBI chr 6:166,922,113...166,956,550
Ensembl chr 6:166,922,113...166,957,191
G
RNU7-1
RNA, U7 small nuclear 1
IAGP
HPO
OMIM:619487 ORPHA:51
NCBI chr12:6,943,816...6,943,878
Ensembl chr12:6,943,816...6,943,878
G
RTEL1
regulator of telomere elongation helicase 1
IAGP
HPO
ORPHA:1775 ORPHA:3322
NCBI chr20:63,657,810...63,696,253
Ensembl chr20:63,657,810...63,696,253
G
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
IAGP
HPO
ORPHA:51
NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893
G
SC5D
sterol-C5-desaturase
IAGP
HPO
ORPHA:46059
NCBI chr11:121,292,771...121,313,410
Ensembl chr11:121,292,681...121,313,410
G
SLC12A3
solute carrier family 12 member 3
IAGP
HPO
ORPHA:358
NCBI chr16:56,865,207...56,915,850
Ensembl chr16:56,865,207...56,915,850
G
SLC20A2
solute carrier family 20 member 2
IAGP
HPO
ORPHA:1980
NCBI chr 8:42,416,475...42,541,954
Ensembl chr 8:42,416,475...42,541,926
G
SLC26A2
solute carrier family 26 member 2
IAGP
HPO
ORPHA:628
NCBI chr 5:149,960,758...149,987,400
Ensembl chr 5:149,960,758...149,993,455
G
SLC29A3
solute carrier family 29 member 3
IAGP
HPO
ORPHA:1782
NCBI chr10:71,319,259...71,381,423
Ensembl chr10:71,319,259...71,381,423
G
SLC46A1
solute carrier family 46 member 1
IAGP
HPO
ORPHA:90045
NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
G
SLC4A4
solute carrier family 4 member 4
IAGP
HPO
OMIM:604278
NCBI chr 4:71,062,660...71,572,083
Ensembl chr 4:71,062,667...71,572,087
G
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
IAGP
HPO
ORPHA:99966
NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009
G
SNORD118
small nucleolar RNA, C/D box 118
IAGP
HPO
OMIM:614561 ORPHA:542310
NCBI chr17:8,173,452...8,173,588
Ensembl chr17:8,173,454...8,173,587
G
SNRPB
small nuclear ribonucleoprotein polypeptides B and B1
IAGP
HPO
ORPHA:1393
NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853
G
STAT2
signal transducer and activator of transcription 2
IAGP
HPO
OMIM:618886
NCBI chr12:56,341,597...56,360,107
Ensembl chr12:56,341,597...56,360,203
G
SUCLA2
succinate-CoA ligase ADP-forming subunit beta
IAGP
HPO
ORPHA:1933
NCBI chr13:47,942,656...48,001,273
Ensembl chr13:47,745,736...48,037,968
G
SUFU
SUFU negative regulator of hedgehog signaling
IAGP
HPO
ORPHA:377
NCBI chr10:102,502,819...102,633,535
Ensembl chr10:102,503,972...102,633,535
G
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
IAGP
HPO
ORPHA:1782
NCBI chr11:68,039,025...68,053,762
Ensembl chr11:68,039,025...68,050,895
G
TERC
telomerase RNA component
IAGP
HPO
ORPHA:1775
NCBI chr 3:169,764,610...169,765,060
Ensembl chr 3:169,764,610...169,765,047 Ensembl chr 3:169,764,610...169,765,047
G
TERT
telomerase reverse transcriptase
IAGP
HPO
ORPHA:1775 ORPHA:3322
NCBI chr 5:1,253,167...1,295,068
Ensembl chr 5:1,253,147...1,295,068
G
TINF2
TERF1 interacting nuclear factor 2
IAGP
HPO
OMIM:268130 OMIM:613990 ORPHA:1775 ORPHA:3322
NCBI chr14:24,239,640...24,242,674
Ensembl chr14:24,238,286...24,242,663
G
TNFRSF11A
TNF receptor superfamily member 11a
IAGP
HPO
ORPHA:1782
NCBI chr18:62,325,310...62,391,288
Ensembl chr18:62,325,287...62,391,288
G
TREM2
triggering receptor expressed on myeloid cells 2
IAGP
HPO
ORPHA:2770
NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
G
TREX1
three prime repair exonuclease 1
IAGP
HPO
ORPHA:247691 ORPHA:51
NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
G
TSC1
TSC complex subunit 1
IAGP
HPO
OMIM:191100
NCBI chr 9:132,891,349...132,945,378
Ensembl chr 9:132,891,348...132,946,874
G
TSC2
TSC complex subunit 2
IAGP
HPO
OMIM:613254
NCBI chr16:2,047,985...2,089,491
Ensembl chr16:2,047,967...2,089,491
G
TYMS
thymidylate synthetase
IAGP
HPO
ORPHA:1775
NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
G
TYROBP
transmembrane immune signaling adaptor TYROBP
IAGP
HPO
ORPHA:2770
NCBI chr19:35,904,403...35,908,295
Ensembl chr19:35,904,401...35,908,295
G
USB1
U6 snRNA biogenesis phosphodiesterase 1
IAGP
HPO
ORPHA:1775
NCBI chr16:57,999,603...58,021,618
Ensembl chr16:57,999,546...58,021,618
G
USP18
ubiquitin specific peptidase 18
IAGP
HPO
OMIM:617397
NCBI chr22:18,150,170...18,177,397
Ensembl chr22:18,150,118...18,177,397
G
VPS33A
VPS33A core subunit of CORVET and HOPS complexes
IAGP
HPO
OMIM:617303 ORPHA:505248
NCBI chr12:122,229,564...122,266,494
Ensembl chr12:122,229,564...122,266,494
G
WRAP53
WD repeat containing antisense to TP53
IAGP
HPO
ORPHA:1775
NCBI chr17:7,686,071...7,703,502
Ensembl chr17:7,686,071...7,703,502
G
WWOX
WW domain containing oxidoreductase
IAGP
HPO
OMIM:616211
NCBI chr16:78,099,654...79,212,667
Ensembl chr16:78,099,400...79,212,667
G
XPR1
xenotropic and polytropic retrovirus receptor 1
IAGP
HPO
ORPHA:1980
NCBI chr 1:180,632,022...180,890,279
Ensembl chr 1:180,632,022...180,890,279
G
ZBTB20
zinc finger and BTB domain containing 20
IAGP
HPO
OMIM:259050
NCBI chr 3:114,314,500...115,147,288
Ensembl chr 3:114,314,500...115,147,292
G
ZNFX1
zinc finger NFX1-type containing 1
IAGP
HPO
OMIM:619644
NCBI chr20:49,245,900...49,278,057
Ensembl chr20:49,237,946...49,278,426
G
ACVR1
activin A receptor type 1
IAGP
HPO
OMIM:135100
NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
G
AP1S2
adaptor related protein complex 1 subunit sigma 2
IAGP
HPO
OMIM:304340
NCBI chr X:15,825,806...15,854,813
Ensembl chr X:15,825,806...15,854,931
G
CA2
carbonic anhydrase 2
IAGP
HPO
OMIM:259730 ORPHA:2785
NCBI chr 8:85,464,007...85,481,493
Ensembl chr 8:85,463,968...85,481,493
G
CASR
calcium sensing receptor
IAGP
HPO
OMIM:601198
NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
G
CYP2U1
cytochrome P450 family 2 subfamily U member 1
IAGP
HPO
OMIM:615030
NCBI chr 4:107,931,549...107,953,461
Ensembl chr 4:107,931,549...107,953,461
G
DENND5A
DENN domain containing 5A
IAGP
HPO
OMIM:617281
NCBI chr11:9,138,825...9,265,350
Ensembl chr11:9,138,825...9,265,959
G
DNM1L
dynamin 1 like
IAGP
HPO
ORPHA:98673
NCBI chr12:32,679,301...32,745,650
Ensembl chr12:32,679,200...32,745,650
G
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit
IAGP
HPO
OMIM:610651
NCBI chr 2:127,257,290...127,294,144
Ensembl chr 2:127,257,290...127,294,166
G
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit
IAGP
HPO
ORPHA:90321
NCBI chr16:13,920,154...13,952,348
Ensembl chr16:13,920,138...13,952,348
G
ERCC6
ERCC excision repair 6, chromatin remodeling factor
IAGP
HPO
OMIM:133540 OMIM:214150 OMIM:278800 ORPHA:90321 ORPHA:90324
NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538
G
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit
IAGP
HPO
OMIM:216400 ORPHA:90321 ORPHA:90324
NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073
G
EXOSC2
exosome component 2
IAGP
HPO
OMIM:617763
NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,707,288
G
FAM111A
FAM111 trypsin like peptidase A
IAGP
HPO
OMIM:127000 ORPHA:93325
NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039
G
GATA3
GATA binding protein 3
IAGP
HPO
OMIM:146255
NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198
G
GJA1
gap junction protein alpha 1
IAGP
HPO
OMIM:164200
NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
G
GNA11
G protein subunit alpha 11
IAGP
HPO
OMIM:615361
NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
G
GNAS
GNAS complex locus
IAGP
HPO
OMIM:103580 OMIM:612462 ORPHA:79443 ORPHA:79444
NCBI chr20:58,839,748...58,911,192
Ensembl chr20:58,839,718...58,911,192
G
IFIH1
interferon induced with helicase C domain 1
IAGP
HPO
OMIM:615846
NCBI chr 2:162,267,074...162,318,684
Ensembl chr 2:162,267,074...162,318,684
G
ISG15
ISG15 ubiquitin like modifier
IAGP
HPO
OMIM:616126
NCBI chr 1:1,013,497...1,014,540
Ensembl chr 1:1,001,138...1,014,540
G
JAM2
junctional adhesion molecule 2
IAGP
HPO
OMIM:618824
NCBI chr21:25,639,258...25,717,562
Ensembl chr21:25,639,258...25,717,562
G
LOC126863256
BRD4-independent group 4 enhancer GRCh37_chrX:48934848-48936047
IAGP
ClinVar Annotator: match by term: Basal ganglia calcification
ClinVar
PMID:32581362
NCBI chr X:49,077,189...49,078,388
G
LSM11
LSM11, U7 small nuclear RNA associated
IAGP
HPO
OMIM:619486
NCBI chr 5:157,743,712...157,760,709
Ensembl chr 5:157,743,712...157,760,709
G
MT-CO1
mitochondrially encoded cytochrome c oxidase I
IAGP
HPO
ORPHA:550
NCBI chr MT:5,904...7,445
Ensembl chr MT:5,904...7,445
G
MT-CO2
mitochondrially encoded cytochrome c oxidase II
IAGP
HPO
ORPHA:550
NCBI chr MT:7,586...8,269
Ensembl chr MT:7,586...8,269
G
MT-CO3
mitochondrially encoded cytochrome c oxidase III
IAGP
HPO
ORPHA:550
NCBI chr MT:9,207...9,990
Ensembl chr MT:9,207...9,990
G
MT-ND1
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1
IAGP
HPO
ORPHA:550
NCBI chr MT:3,307...4,262
Ensembl chr MT:3,307...4,262
G
MT-ND4
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4
IAGP
HPO
ORPHA:550
NCBI chr MT:10,760...12,137
Ensembl chr MT:10,760...12,137
G
MT-ND5
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5
IAGP
HPO
ORPHA:550
NCBI chr MT:12,337...14,148
Ensembl chr MT:12,337...14,148
G
MT-ND6
mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6
IAGP
HPO
ORPHA:550
NCBI chr MT:14,149...14,673
Ensembl chr MT:14,149...14,673
G
MT-TF
mitochondrially encoded tRNA-Phe (UUU/C)
IAGP
HPO
ORPHA:550
NCBI chr MT:577...647
Ensembl chr MT:577...647
G
MT-TH
mitochondrially encoded tRNA-His (CAU/C)
IAGP
HPO
ORPHA:550
NCBI chr MT:12,138...12,206
Ensembl chr MT:12,138...12,206
G
MT-TL1
mitochondrially encoded tRNA-Leu (UUA/G) 1
IAGP
HPO
ORPHA:550
NCBI chr MT:3,230...3,304
Ensembl chr MT:3,230...3,304
G
MT-TQ
mitochondrially encoded tRNA-Gln (CAA/G)
IAGP
HPO
ORPHA:550
NCBI chr MT:4,329...4,400
Ensembl chr MT:4,329...4,400
G
MT-TS1
mitochondrially encoded tRNA-Ser (UCN) 1
IAGP
HPO
ORPHA:550
NCBI chr MT:7,446...7,514
Ensembl chr MT:7,446...7,514
G
MT-TS2
mitochondrially encoded tRNA-Ser (AGU/C) 2
IAGP
HPO
ORPHA:550
NCBI chr MT:12,207...12,265
Ensembl chr MT:12,207...12,265
G
MT-TW
mitochondrially encoded tRNA-Trp (UGA/G)
IAGP
HPO
ORPHA:550
NCBI chr MT:5,512...5,579
Ensembl chr MT:5,512...5,579
G
MYORG
myogenesis regulating glycosidase (putative)
IAGP
HPO
OMIM:618317
NCBI chr 9:34,366,666...34,376,898
Ensembl chr 9:34,366,666...34,376,898
G
OPA1
OPA1 mitochondrial dynamin like GTPase
IAGP
HPO
ORPHA:98673
NCBI chr 3:193,593,208...193,697,811
Ensembl chr 3:193,593,144...193,697,811
G
PDGFB
platelet derived growth factor subunit B
IAGP
HPO
OMIM:213600 OMIM:615483
NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
G
PDGFRB
platelet derived growth factor receptor beta
IAGP
HPO
OMIM:213600 OMIM:615007
NCBI chr 5:150,113,839...150,155,845
Ensembl chr 5:150,113,839...150,155,872
G
PSMB8
proteasome 20S subunit beta 8
IAGP
HPO
OMIM:256040
NCBI chr 6:32,840,717...32,844,679
Ensembl chr 6:32,840,717...32,844,679
G
PSMG2
proteasome assembly chaperone 2
IAGP
HPO
OMIM:619183
NCBI chr18:12,658,738...12,725,740
Ensembl chr18:12,658,043...12,728,945
G
RBBP8
RB binding protein 8, endonuclease
IAGP
HPO
OMIM:606744
NCBI chr18:22,914,139...23,026,486
Ensembl chr18:22,798,261...23,026,488
G
RNASEH2B
ribonuclease H2 subunit B
IAGP
HPO
OMIM:610181
NCBI chr13:50,909,678...50,970,460
Ensembl chr13:50,909,747...51,024,120
G
RNU7-1
RNA, U7 small nuclear 1
IAGP
HPO
OMIM:619487
NCBI chr12:6,943,816...6,943,878
Ensembl chr12:6,943,816...6,943,878
G
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
IAGP
HPO
OMIM:612952
NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893
G
SLC20A2
solute carrier family 20 member 2
IAGP
HPO
OMIM:213600
NCBI chr 8:42,416,475...42,541,954
Ensembl chr 8:42,416,475...42,541,926
G
SLC25A46
solute carrier family 25 member 46
IAGP
HPO
OMIM:616505
NCBI chr 5:110,738,145...110,765,157
Ensembl chr 5:110,738,136...110,765,161
G
SLC46A1
solute carrier family 46 member 1
IAGP
HPO
OMIM:229050
NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
G
SNORD118
small nucleolar RNA, C/D box 118
IAGP
HPO
ORPHA:542310
NCBI chr17:8,173,452...8,173,588
Ensembl chr17:8,173,454...8,173,587
G
TREM2
triggering receptor expressed on myeloid cells 2
IAGP
HPO
OMIM:618193
NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
G
TREX1
three prime repair exonuclease 1
IAGP
HPO
OMIM:225750
NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
G
TYROBP
transmembrane immune signaling adaptor TYROBP
IAGP
HPO
OMIM:221770
NCBI chr19:35,904,403...35,908,295
Ensembl chr19:35,904,401...35,908,295
G
WDR45
WD repeat domain 45
IAGP
ClinVar Annotator: match by term: Basal ganglia calcification
ClinVar
PMID:32581362
NCBI chr X:49,074,442...49,101,178
Ensembl chr X:49,074,433...49,101,170
G
XPR1
xenotropic and polytropic retrovirus receptor 1
IAGP
HPO
OMIM:616413
NCBI chr 1:180,632,022...180,890,279
Ensembl chr 1:180,632,022...180,890,279
G
ECM1
extracellular matrix protein 1
IAGP
HPO
OMIM:247100
NCBI chr 1:150,508,109...150,513,789
Ensembl chr 1:150,508,062...150,513,789
G
ABCC6
ATP binding cassette subfamily C member 6
IAGP
HPO
OMIM:177850
NCBI chr16:16,149,565...16,223,494
Ensembl chr16:16,149,565...16,223,522
G
COL11A1
collagen type XI alpha 1 chain
IAGP
HPO
OMIM:154780
NCBI chr 1:102,876,473...103,108,522
Ensembl chr 1:102,876,467...103,108,872
G
DDR2
discoidin domain receptor tyrosine kinase 2
IAGP
HPO
OMIM:271665
NCBI chr 1:162,630,863...162,787,405
Ensembl chr 1:162,631,373...162,787,405
G
PTCH1
patched 1
IAGP
HPO
OMIM:109400 ORPHA:377 ORPHA:77301
NCBI chr 9:95,442,980...95,516,971
Ensembl chr 9:95,442,980...95,517,057
G
PTCH2
patched 2
IAGP
HPO
ORPHA:377
NCBI chr 1:44,819,845...44,843,253
Ensembl chr 1:44,819,844...44,843,253
G
SUFU
SUFU negative regulator of hedgehog signaling
IAGP
HPO
OMIM:620343 ORPHA:377
NCBI chr10:102,502,819...102,633,535
Ensembl chr10:102,503,972...102,633,535
G
ZSWIM6
zinc finger SWIM-type containing 6
IAGP
HPO
OMIM:603671
NCBI chr 5:61,332,258...61,546,172
Ensembl chr 5:61,332,258...61,546,172
G
CPT2
carnitine palmitoyltransferase 2
IAGP
HPO
OMIM:608836 ORPHA:228308
NCBI chr 1:53,196,824...53,214,197
Ensembl chr 1:53,196,792...53,214,197
G
IFIH1
interferon induced with helicase C domain 1
IAGP
HPO
OMIM:615846
NCBI chr 2:162,267,074...162,318,684
Ensembl chr 2:162,267,074...162,318,684
G
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
IAGP
HPO
OMIM:612952
NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,890,229...36,951,893
G
SLC2A1
solute carrier family 2 member 1
IAGP
HPO
OMIM:608885 ORPHA:168577
NCBI chr 1:42,925,353...42,958,868
Ensembl chr 1:42,925,353...42,958,893
G
SNORD118
small nucleolar RNA, C/D box 118
IAGP
HPO
ORPHA:542310
NCBI chr17:8,173,452...8,173,588
Ensembl chr17:8,173,454...8,173,587
G
TREX1
three prime repair exonuclease 1
IAGP
HPO
OMIM:225750
NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
G
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit
IAGP
HPO
ORPHA:90322
NCBI chr19:45,407,334...45,451,547
Ensembl chr19:45,407,334...45,478,828
G
ERCC6
ERCC excision repair 6, chromatin remodeling factor
IAGP
HPO
OMIM:133540 ORPHA:90322 ORPHA:90324
NCBI chr10:49,434,881...49,539,538
Ensembl chr10:49,454,168...49,539,538
G
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit
IAGP
HPO
ORPHA:90322 ORPHA:90324
NCBI chr 5:60,866,454...60,945,070
Ensembl chr 5:60,866,454...60,945,073
G
KARS1
lysyl-tRNA synthetase 1
IAGP
HPO
ORPHA:3240
NCBI chr16:75,627,724...75,647,665
Ensembl chr16:75,627,474...75,648,643
G
SNORD118
small nucleolar RNA, C/D box 118
IAGP
HPO
ORPHA:542310
NCBI chr17:8,173,452...8,173,588
Ensembl chr17:8,173,454...8,173,587
G
ECM1
extracellular matrix protein 1
IAGP
HPO
OMIM:247100
NCBI chr 1:150,508,109...150,513,789
Ensembl chr 1:150,508,062...150,513,789
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all