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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of skeletal muscle cell differentiation
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Accession:GO:2001014 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation.



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regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:17011493) RGD PMID:17011493 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (MGI:5315343|PMID:17011493) RGD PMID:17011493 MGI:5315343 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
JBrowse link
G Klhl41 kelch-like family member 41 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5424274|PMID:22562206)
RGD PMID:22562206 PMID:21873635 MGI:5424274, RGD:13792537 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5526938|PMID:15623503)
UniProt
Ensembl
RGD
PMID:15623503 GO_REF:0000024 GO_REF:0000107 MGI:5526938 NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 acts_upstream_of_or_within ISO (MGI:5485311|PMID:23349951) RGD PMID:23349951 MGI:5485311 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5520038|PMID:22363741)
UniProt
RGD
PMID:22363741 GO_REF:0000024 MGI:5520038 NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164
JBrowse link
negative regulation of satellite cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin1 akirin 1 involved_in ISO (MGI:6201977|PMID:18255059) RGD PMID:18255059 MGI:6201977 NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762
JBrowse link
G Ephb1 Eph receptor B1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5897527|PMID:27446912)
UniProt
RGD
PMID:27446912 GO_REF:0000024 MGI:5897527 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Mstn myostatin involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 9:48,453,982...48,458,809
Ensembl chr 9:48,452,533...48,458,933
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:4836102|PMID:20696153) RGD PMID:20696153 MGI:4836102 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
negative regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn3 calpain 3 acts_upstream_of_or_within ISO (MGI:5476405|PMID:23300487) RGD PMID:23300487 MGI:5476405 NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:18451334)
GO_REF:0000107
RGD
Ensembl
PMID:18451334 GO_REF:0000107 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G S100b S100 calcium binding protein B IMP RGD PMID:20069545 RGD:5508829 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
JBrowse link
positive regulation of skeletal muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5553223|PMID:23525013)
UniProt
RGD
PMID:23525013 GO_REF:0000024 MGI:5553223 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Gpc1 glypican 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:20100867)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:20100867 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:21556048)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21556048 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (MGI:5566551|PMID:24532688) RGD PMID:24532688 MGI:5566551 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) RGD PMID:25313962 MGI:6148527 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3809313|PMID:18816858)
UniProt
RGD
PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nln neurolysin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4125183 (MGI:5588076|PMID:24719333)
Ensembl
RGD
PMID:24719333 GO_REF:0000107 MGI:5588076 NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    regulation of biological process 12890
      regulation of cellular process 12361
        regulation of cell differentiation 1722
          regulation of skeletal muscle cell differentiation 22
            negative regulation of skeletal muscle cell differentiation + 7
            positive regulation of skeletal muscle cell differentiation + 7
            regulation of skeletal muscle fiber differentiation + 4
Path 2
Term Annotations click to browse term
  biological_process 19541
    developmental process 6920
      anatomical structure development 6337
        multicellular organism development 5765
          system development 5408
            animal organ development 4163
              muscle organ development 359
                skeletal muscle organ development 227
                  skeletal muscle tissue development 212
                    skeletal muscle cell differentiation 79
                      regulation of skeletal muscle cell differentiation 22
                        negative regulation of skeletal muscle cell differentiation + 7
                        positive regulation of skeletal muscle cell differentiation + 7
                        regulation of skeletal muscle fiber differentiation + 4
paths to the root