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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of cytoplasmic translation
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Accession:GO:2000765 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cytoplasmic translation.


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regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:28355180) RGD PMID:28355180 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Zfp385a zinc finger protein 385A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18418387)		 GO_Central
RGD		 PMID:18418387 GO_REF:0000033 NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548 		JBrowse link
negative regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh3 alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase involved_in ISO (PMID:26863196) RGD PMID:26863196 NCBI chr 3:79,939,515...79,972,820
Ensembl chr 3:79,939,600...79,972,000 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO
IBA
ISS		 (PMID:18752464)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:18752464 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760 		JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:18752464)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:18752464 GO_REF:0000024 GO_REF:0000033 NCBI chr14:67,787,503...67,839,973
Ensembl chr14:67,787,507...67,840,743 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:15,717,794...15,780,482
Ensembl chr10:15,717,794...15,780,603 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:11376146)		 UniProt
RGD		 PMID:11376146 GO_REF:0000024 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 involved_in ISO
IEA		 (PMID:34314702)
GO_REF:0000107		 RGD
Ensembl		 PMID:34314702 GO_REF:0000107 NCBI chr13:65,105,950...65,277,350
Ensembl chr13:65,105,950...65,278,484 		JBrowse link
G Parp16 poly (ADP-ribose) polymerase family, member 16 involved_in IEA
ISO		 GO_REF:0000107
(PMID:34314702)		 Ensembl
RGD		 PMID:34314702 GO_REF:0000107 NCBI chr 8:65,731,152...65,749,438
Ensembl chr 8:65,727,706...65,749,433 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29358667) RGD PMID:29358667 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Unk unk zinc finger involved_in ISO (PMID:25737280) RGD PMID:25737280 NCBI chr10:101,265,732...101,295,950
Ensembl chr10:101,265,703...101,295,967 		JBrowse link
negative regulation of cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in IDA PMID:22157746 UniProt PMID:22157746 RGD:8553654 NCBI chr14:67,787,503...67,839,973
Ensembl chr14:67,787,507...67,840,743 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:22157746) RGD PMID:22157746 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl13a ribosomal protein L13A involved_in ISO
ISS		 (PMID:17218275)
GO_REF:0000024		 RGD
UniProt		 PMID:17218275 GO_REF:0000024 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
positive regulation of cap-dependent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23444369)		 UniProt
Ensembl
RGD		 PMID:23444369 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:82,877,228...82,933,828
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:23444369) RGD PMID:23444369 NCBI chr13:47,309,607...47,357,432
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
positive regulation of cap-independent translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:26593424) RGD PMID:26593424 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:11959995) RGD PMID:11959995 NCBI chr 8:101,018,610...101,079,237
Ensembl chr 8:101,018,702...101,079,300 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:26458103) RGD PMID:26458103 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144 		JBrowse link
positive regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnbp CCHC-type zinc finger, nucleic acid binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,302,768...120,311,694
Ensembl chr 4:120,302,771...120,311,637 		JBrowse link
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS		 (PMID:26489465)
GO_REF:0000024		 RGD
UniProt		 PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162), (PMID:19029303), (PMID:21247876), (PMID:22190748) RGD PMID:16680162 PMID:19029303 PMID:21247876 PMID:22190748 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IMP RGD PMID:19625250 RGD:10401254 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303)
(PMID:23388827)		 RGD PMID:19029303 PMID:23388827 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:21247876) RGD PMID:21247876 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:19114715) RGD PMID:19114715 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Pkm pyruvate kinase M1/2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28575669)		 UniProt
RGD		 PMID:28575669 GO_REF:0000024 NCBI chr 8:60,057,629...60,079,600
Ensembl chr 8:60,057,402...60,079,599 		JBrowse link
G Pkm_v1 pyruvate kinase M1/2, variant 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Pkm_v2 pyruvate kinase M1/2, variant 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IEA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 PMID:19029303 GO_REF:0000107 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Ybx3 Y box binding protein 3 involved_in ISO (PMID:22711822) RGD PMID:22711822 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161 		JBrowse link
G Zcchc13 zinc finger CCHC-type containing 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:68,643,568...68,644,671
Ensembl chr  X:68,643,549...68,665,131 		JBrowse link
positive regulation of cytoplasmic translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sh3bgrl1 SH3 domain binding glutamate rich protein like 1 involved_in ISO (PMID:34331014) RGD PMID:34331014 NCBI chr  X:74,167,029...74,263,783
Ensembl chr  X:74,166,871...74,263,783 		JBrowse link
regulation of cytoplasmic translational initiation in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:24333428) RGD PMID:24333428 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630 		JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:24333428)		 UniProt
RGD		 PMID:24333428 GO_REF:0000024 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    cellular process 19154
      metabolic process 11953
        macromolecule metabolic process 9810
          protein metabolic process 5295
            regulation of protein metabolic process 2178
              regulation of translation 492
                regulation of cytoplasmic translation 39
                  negative regulation of cytoplasmic translation + 10
                  positive regulation of cytoplasmic translation 19
                  regulation of cytoplasmic translation in response to stress + 2
                  regulation of cytoplasmic translational initiation + 9
                  regulation of cytoplasmic translational termination 0
Path 2
Term Annotations click to browse term
  biological_process 20075
    biological regulation 13559
      regulation of biological process 13136
        regulation of cellular process 12773
          regulation of metabolic process 6747
            regulation of biosynthetic process 5511
              regulation of macromolecule biosynthetic process 5309
                regulation of gene expression 5190
                  post-transcriptional regulation of gene expression 773
                    regulation of translation 492
                      regulation of cytoplasmic translation 39
                        negative regulation of cytoplasmic translation + 10
                        positive regulation of cytoplasmic translation 19
                        regulation of cytoplasmic translation in response to stress + 2
                        regulation of cytoplasmic translational initiation + 9
                        regulation of cytoplasmic translational termination 0
paths to the root