ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of stem cell differentiation |
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Accession: | GO:2000736
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of stem cell differentiation. |
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Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
MGI:3589287 (MGI:3528782|PMID:15713842) |
RGD |
PMID:15713842 |
MGI:3528782 |
NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
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Kdm3a |
lysine demethylase 3A |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3759699|PMID:17938240) |
Ensembl RGD |
PMID:17938240 |
GO_REF:0000107 MGI:3759699 |
NCBI chr 4:99,503,160...99,547,315
Ensembl chr 4:99,503,176...99,546,905
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Kdm4c |
lysine demethylase 4C |
acts_upstream_of_or_within |
ISO |
(MGI:3759699|PMID:17938240) |
RGD |
PMID:17938240 |
MGI:3759699 |
NCBI chr 5:90,800,139...91,012,662
Ensembl chr 5:90,800,082...91,012,659
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Nsun2 |
NOP2/Sun RNA methyltransferase 2 |
involved_in |
ISO |
(MGI:5304206|PMID:22144916) |
RGD |
PMID:22144916 |
MGI:5304206 |
NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966
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Ociad1 |
OCIA domain containing 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5908327|PMID:23972987) |
UniProt RGD |
PMID:23972987 |
GO_REF:0000024 MGI:5908327 |
NCBI chr14:37,458,023...37,475,485
Ensembl chr14:37,458,029...37,475,418
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Prdm4 |
PR/SET domain 4 |
involved_in |
IMP |
PMID:23048031 |
ParkinsonsUK-UCL |
PMID:23048031 |
RGD:10054084 |
NCBI chr 7:23,959,932...23,986,535
Ensembl chr 7:23,960,378...23,985,525
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Tead2 |
TEA domain transcription factor 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5317256|PMID:21385842) |
RGD |
PMID:21385842 |
MGI:5317256 |
NCBI chr 1:101,213,782...101,230,483
Ensembl chr 1:101,213,788...101,230,477
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Rest |
RE1-silencing transcription factor |
involved_in |
ISO ISS IEA |
(PMID:20942606) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:20942606 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
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Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
ISO IEA |
(PMID:21199191) GO_REF:0000107 |
RGD Ensembl |
PMID:21199191 |
GO_REF:0000107 |
NCBI chr 7:134,702,964...134,799,437
Ensembl chr 7:134,702,964...134,722,215
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Wnt3a |
Wnt family member 3A |
involved_in |
ISO |
(PMID:19736317) |
RGD |
PMID:19736317 |
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NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
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Hspa9 |
heat shock protein family A (Hsp70) member 9 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5784980|PMID:21123823) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:21123823 |
GO_REF:0000024 GO_REF:0000107 MGI:5784980 |
NCBI chr18:27,731,072...27,749,235
Ensembl chr18:27,731,072...27,749,235
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N4bp2l2 |
NEDD4 binding protein 2-like 2 |
involved_in |
ISO |
(PMID:19506020) |
RGD |
PMID:19506020 |
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NCBI chr12:627,128...650,604
Ensembl chr12:628,488...650,376
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Nfe2l2 |
nuclear factor, erythroid 2-like 2 |
involved_in |
ISO |
(MGI:5476857|PMID:23434824) |
RGD |
PMID:23434824 |
MGI:5476857 |
NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
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Tcf15 |
transcription factor 15 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6479302|PMID:32669716) |
Ensembl RGD |
PMID:32669716 |
GO_REF:0000107 MGI:6479302 |
NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
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Mir154 |
microRNA 154 |
acts_upstream_of_or_within |
ISO |
(MGI:5705446|PMID:25959411) |
RGD |
PMID:25959411 |
MGI:5705446 |
NCBI chr 6:133,888,586...133,888,669
Ensembl chr 6:133,888,586...133,888,669
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Rest |
RE1-silencing transcription factor |
involved_in |
ISO |
(PMID:18570921) |
RGD |
PMID:18570921 |
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NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
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Ccnk |
cyclin K |
acts_upstream_of_or_within |
ISO |
(MGI:5467199|PMID:22547058) |
RGD |
PMID:22547058 |
MGI:5467199 |
NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557
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Cdk12 |
cyclin-dependent kinase 12 |
acts_upstream_of_or_within |
ISO |
(MGI:5467199|PMID:22547058) |
RGD |
PMID:22547058 |
MGI:5467199 |
NCBI chr10:86,157,186...86,210,657
Ensembl chr10:86,157,608...86,222,707
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Cdk13 |
cyclin-dependent kinase 13 |
acts_upstream_of_or_within |
ISO |
(MGI:5467199|PMID:22547058) |
RGD |
PMID:22547058 |
MGI:5467199 |
NCBI chr17:49,833,194...49,922,932
Ensembl chr17:49,833,400...49,921,550
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Esrrb |
estrogen-related receptor beta |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5887187|PMID:26206133) |
UniProt RGD |
PMID:26206133 |
GO_REF:0000024 MGI:5887187 |
NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
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H1f8 |
H1.8 linker histone |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5559660|PMID:22868987) |
UniProt RGD |
PMID:22868987 |
GO_REF:0000024 MGI:5559660 |
NCBI chr 4:147,844,658...147,849,779
Ensembl chr 4:147,844,658...147,849,779
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Hes1 |
hes family bHLH transcription factor 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:19682396) |
Ensembl RGD |
PMID:19682396 |
GO_REF:0000107 |
NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
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Hes5 |
hes family bHLH transcription factor 5 |
involved_in |
ISO ISS |
(PMID:19682396) GO_REF:0000024 |
RGD UniProt |
PMID:19682396 |
GO_REF:0000024 |
NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
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Hnrnpu |
heterogeneous nuclear ribonucleoprotein U |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5908336|PMID:21235343) (PMID:21235343) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21235343 |
GO_REF:0000024 GO_REF:0000107 MGI:5908336 |
NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
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Jag1 |
jagged canonical Notch ligand 1 |
involved_in |
ISO IEA |
(PMID:19682396) GO_REF:0000107 |
RGD Ensembl |
PMID:19682396 |
GO_REF:0000107 |
NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
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Lbh |
LBH regulator of WNT signaling pathway |
involved_in |
ISO |
(MGI:5634223|PMID:25655704) |
RGD |
PMID:25655704 |
MGI:5634223 |
NCBI chr 6:24,154,207...24,184,217
Ensembl chr 6:24,160,226...24,181,866
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Mir125a |
microRNA 125a |
acts_upstream_of_or_within |
ISO |
MGI:1921298 (MGI:5465045|PMID:22751012) |
RGD |
PMID:22751012 |
MGI:5465045 |
NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
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Ncoa3 |
nuclear receptor coactivator 3 |
acts_upstream_of_or_within |
ISO |
(MGI:5467164|PMID:22977234) |
RGD |
PMID:22977234 |
MGI:5467164 |
NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548
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Nelfb |
negative elongation factor complex member B |
involved_in |
ISO |
(MGI:3845453|PMID:19340312) |
RGD |
PMID:19340312 |
MGI:3845453 |
NCBI chr 3:2,414,448...2,431,148
Ensembl chr 3:2,414,451...2,431,148
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Notch1 |
notch receptor 1 |
involved_in |
ISO |
(PMID:19682396) |
RGD |
PMID:19682396 |
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NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
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Stat3 |
signal transducer and activator of transcription 3 |
acts_upstream_of_or_within |
ISO |
(MGI:5659778|PMID:25335925) |
RGD |
PMID:25335925 |
MGI:5659778 |
NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
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Trim6 |
tripartite motif containing 6 |
involved_in |
ISO |
(MGI:5492022|PMID:22328504) |
RGD |
PMID:22328504 |
MGI:5492022 |
NCBI chr 1:169,410,084...169,423,305
Ensembl chr 1:169,410,115...169,423,283
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Yap1 |
Yes1 associated transcriptional regulator |
acts_upstream_of_or_within |
ISO |
(MGI:4455217|PMID:20516196) |
RGD |
PMID:20516196 |
MGI:4455217 |
NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
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Ythdf2 |
YTH N(6)-methyladenosine RNA binding protein 2 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:32169943) |
Ensembl RGD |
PMID:32169943 |
GO_REF:0000107 |
NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
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Zfp36l2 |
zinc finger protein 36, C3H type-like 2 |
involved_in |
ISO |
(MGI:5500826|PMID:23748442) |
RGD |
PMID:23748442 |
MGI:5500826 |
NCBI chr 6:7,417,416...7,423,447
Ensembl chr 6:7,417,425...7,421,456
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Dhx36 |
DEAH-box helicase 36 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6201954|PMID:26489465) |
UniProt RGD |
PMID:26489465 |
GO_REF:0000024 MGI:6201954 |
NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
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Gata4 |
GATA binding protein 4 |
acts_upstream_of_or_within |
ISO |
(PMID:16137232) |
RGD |
PMID:16137232 |
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NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
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Gata6 |
GATA binding protein 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (PMID:16137232) |
Ensembl RGD |
PMID:16137232 |
GO_REF:0000107 |
NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
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Nkx2-5 |
NK2 homeobox 5 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3784761|PMID:11889119) |
Ensembl RGD |
PMID:11889119 |
GO_REF:0000107 MGI:3784761 |
NCBI chr10:16,635,989...16,638,758
Ensembl chr10:16,635,989...16,638,764
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Tbx5 |
T-box transcription factor 5 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:11431700) |
UniProt Ensembl RGD |
PMID:11431700 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:42,059,688...42,148,226
Ensembl chr12:42,097,626...42,148,146
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Tgfb2 |
transforming growth factor, beta 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:15896309) |
AgBase RGD |
PMID:15896309 |
GO_REF:0000024 |
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
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Foxc1 |
forkhead box C1 |
involved_in |
ISO |
(MGI:5569870|PMID:24590069) |
RGD |
PMID:24590069 |
MGI:5569870 |
NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
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Ltbp3 |
latent transforming growth factor beta binding protein 3 |
involved_in |
ISO |
(PMID:18672106) |
RGD |
PMID:18672106 |
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NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
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Sox5 |
SRY-box transcription factor 5 |
involved_in |
ISO |
(PMID:21401405) |
RGD |
PMID:21401405 |
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NCBI chr 4:178,062,267...179,031,991
Ensembl chr 4:178,066,165...178,441,547
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Sox6 |
SRY-box transcription factor 6 |
involved_in |
ISO |
(PMID:21401405) |
RGD |
PMID:21401405 |
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NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829
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Sox9 |
SRY-box transcription factor 9 |
involved_in |
ISO ISS |
(PMID:21401405) GO_REF:0000024 |
RGD UniProt |
PMID:21401405 |
GO_REF:0000024 |
NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
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Gsk3b |
glycogen synthase kinase 3 beta |
acts_upstream_of_or_within |
ISO |
(MGI:5319061|PMID:22064483) |
RGD |
PMID:22064483 |
MGI:5319061 |
NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
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Hoxb4 |
homeo box B4 |
involved_in |
ISO |
(PMID:18932205) |
RGD |
PMID:18932205 |
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NCBI chr10:84,167,331...84,169,913
Ensembl chr10:84,167,331...84,169,907
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Mir100 |
microRNA 100 |
acts_upstream_of_or_within |
ISO |
(MGI:4822296|PMID:20439489) |
RGD |
PMID:20439489 |
MGI:4822296 |
NCBI chr 8:45,746,948...45,747,027
Ensembl chr 8:45,746,948...45,747,027
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Mir137 |
microRNA 137 |
acts_upstream_of_or_within |
ISO |
(MGI:4822296|PMID:20439489) |
RGD |
PMID:20439489 |
MGI:4822296 |
NCBI chr 2:221,658,106...221,658,207
Ensembl chr 2:221,658,106...221,658,207
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Mir34a |
microRNA 34a |
acts_upstream_of_or_within |
ISO |
(MGI:4822296|PMID:20439489) |
RGD |
PMID:20439489 |
MGI:4822296 |
NCBI chr 5:167,092,491...167,092,592
Ensembl chr 5:167,092,491...167,092,592
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Nudt21 |
nudix hydrolase 21 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6110185|PMID:29249356) |
UniProt RGD |
PMID:29249356 |
GO_REF:0000024 MGI:6110185 |
NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
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Ptn |
pleiotrophin |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3045656|PMID:15121180) |
UniProt RGD |
PMID:15121180 |
GO_REF:0000024 MGI:3045656 |
NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
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Pwp1 |
PWP1 homolog, endonuclein |
acts_upstream_of_or_within |
ISO |
(MGI:5659778|PMID:25335925) |
RGD |
PMID:25335925 |
MGI:5659778 |
NCBI chr 7:23,988,776...24,004,774
Ensembl chr 7:23,988,776...24,004,774
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Rbm24 |
RNA binding motif protein 24 |
involved_in |
ISO |
(PMID:26990106) |
RGD |
PMID:26990106 |
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NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
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Sp7 |
Sp7 transcription factor |
involved_in |
ISO |
(PMID:18932205) |
RGD |
PMID:18932205 |
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NCBI chr 7:143,957,316...143,967,488
Ensembl chr 7:143,958,858...143,967,484
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Tacstd2 |
tumor-associated calcium signal transducer 2 |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 (MGI:5440097|PMID:23070813) PMID:21873635 |
Ensembl RGD |
PMID:23070813, PMID:21873635 |
GO_REF:0000107 MGI:5440097, RGD:13792537 |
NCBI chr 4:98,341,187...98,342,887
Ensembl chr 4:98,341,188...98,342,887
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Tcf15 |
transcription factor 15 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6508503|PMID:23395635) |
Ensembl RGD |
PMID:23395635 |
GO_REF:0000107 MGI:6508503 |
NCBI chr 3:147,643,250...147,649,511
Ensembl chr 3:147,643,250...147,649,504
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Vsir |
V-set immunoregulatory receptor |
acts_upstream_of_or_within |
ISO |
MGI:2676809 (MGI:5465045|PMID:22751012) |
RGD |
PMID:22751012 |
MGI:5465045 |
NCBI chr20:29,897,543...29,923,381
Ensembl chr20:29,897,594...29,919,998
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Cdk6 |
cyclin-dependent kinase 6 |
acts_upstream_of_or_within |
ISO |
MGI:3053975 (MGI:5636128|PMID:25342715) |
RGD |
PMID:25342715 |
MGI:5636128 |
NCBI chr 4:27,781,728...27,969,653
Ensembl chr 4:27,785,647...27,966,398
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Eif2ak2 |
eukaryotic translation initiation factor 2-alpha kinase 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5487705|PMID:23403623) |
UniProt RGD |
PMID:23403623 |
GO_REF:0000024 MGI:5487705 |
NCBI chr 6:1,428,845...1,466,193
Ensembl chr 6:1,428,834...1,466,201
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Prkdc |
protein kinase, DNA-activated, catalytic subunit |
involved_in |
ISO |
(MGI:6414739|PMID:32103174) |
RGD |
PMID:32103174 |
MGI:6414739 |
NCBI chr11:89,293,547...89,510,948
Ensembl chr11:89,293,696...89,510,871
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Pus7 |
pseudouridine synthase 7 |
involved_in |
ISO |
(PMID:29628141) |
RGD |
PMID:29628141 |
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NCBI chr 4:7,889,727...7,931,357
Ensembl chr 4:7,889,869...7,930,706
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Setd1a |
SET domain containing 1A, histone lysine methyltransferase |
involved_in |
ISO |
(PMID:27141965) |
RGD |
PMID:27141965 |
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NCBI chr 1:199,222,584...199,247,993
Ensembl chr 1:199,225,100...199,247,988
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Ythdf2 |
YTH N(6)-methyladenosine RNA binding protein 2 |
involved_in |
ISO |
(MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673) |
RGD |
PMID:30065315 PMID:30150673 |
MGI:6316688 MGI:6317061 |
NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
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Mir21 |
microRNA 21 |
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IMP |
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RGD |
PMID:27798620 |
RGD:41404703 |
NCBI chr10:73,902,210...73,902,301
Ensembl chr10:73,902,210...73,902,301
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Pdgfra |
platelet derived growth factor receptor alpha |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:21596750) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21596750 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
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G |
Slc4a11 |
solute carrier family 4 member 11 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 3:123,224,242...123,236,535
Ensembl chr 3:123,224,242...123,236,535
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G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
NOT|involved_in |
ISO |
(MGI:3040576|PMID:15073157) |
RGD |
PMID:15073157 |
MGI:3040576 |
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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G |
Bmpr1a |
bone morphogenetic protein receptor type 1A |
NOT|involved_in |
ISO |
(MGI:3040576|PMID:15073157) |
RGD |
PMID:15073157 |
MGI:3040576 |
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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Term paths to the root
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