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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
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Accession:GO:2000622 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.
Synonyms:exact_synonym: regulation of mRNA breakdown, nonsense-mediated decay;   regulation of mRNA catabolic process, nonsense-mediated;   regulation of mRNA catabolism, nonsense-mediated;   regulation of mRNA degradation, nonsense-mediated decay;   regulation of nonsense-mediated mRNA decay;   regulation of nuclear mRNA catabolic process, nonsense-mediated decay


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negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx34 DExH-box helicase 34 JBrowse link 1 78,069,260 78,112,488 RGD:1624291
G Nbas NBAS subunit of NRZ tethering complex JBrowse link 6 38,474,773 38,777,146 RGD:1624291
G Pabpc1 poly(A) binding protein, cytoplasmic 1 JBrowse link 7 75,409,581 75,421,874 RGD:1624291
RGD:1600115
G Secisbp2 SECIS binding protein 2 JBrowse link 17 13,555,348 13,586,595 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    regulation of biological process 12959
      regulation of metabolic process 6886
        regulation of macromolecule metabolic process 6375
          regulation of gene expression 4685
            regulation of mRNA catabolic process 129
              regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4
                negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4
                positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 0
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      cellular metabolic process 10918
        cellular aromatic compound metabolic process 5567
          nucleobase-containing compound metabolic process 5344
            nucleic acid metabolic process 4850
              RNA metabolic process 4347
                RNA catabolic process 261
                  mRNA catabolic process 225
                    nuclear-transcribed mRNA catabolic process 112
                      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 28
                        regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4
                          negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 4
                          positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.