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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of DNA biosynthetic process
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Accession:GO:2000573 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of DNA biosynthetic process.
Synonyms:exact_synonym: positive regulation of DNA anabolism;   positive regulation of DNA biosynthesis;   positive regulation of DNA formation;   positive regulation of DNA synthesis


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positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 IMP RGD PMID:19254952 RGD:5509898 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850 		JBrowse link
G C3ar1 complement C3a receptor 1 IMP RGD PMID:23713944 RGD:7411623 NCBI chr 4:157,747,419...157,756,609
Ensembl chr 4:156,075,389...156,084,701 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:17267544 RGD:2303063 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Ccna2 cyclin A2 IMP RGD PMID:18667424 RGD:10054494 NCBI chr 2:121,355,363...121,361,762
Ensembl chr 2:119,426,089...119,433,577 		JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16005543 RGD:5131269 NCBI chr 4:85,553,163...85,596,203
Ensembl chr 4:84,224,002...84,265,904 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:21,093,927...21,103,091
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:22446327 RGD:10401140 NCBI chr20:3,577,200...3,589,651
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Egf epidermal growth factor IDA RGD PMID:3093142 RGD:10395243 NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:218,219,415...218,302,064 		JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO
IEA		 UniProtKB:Q9H3U7 (PMID:16774925)
GO_REF:0000107		 RGD
Ensembl		 PMID:16774925 GO_REF:0000107 NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO
ISS
IEA		 (PMID:21653700)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21653700 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,466,686...9,481,423
Ensembl chr17:9,461,547...9,476,242 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration IDA RGD PMID:16937468 RGD:9685728 NCBI chr10:14,223,023...14,225,736
Ensembl chr10:13,718,489...13,720,869 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:12721208 RGD:10045365 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hgf hepatocyte growth factor involved_in ISO
IEA		 (PMID:2531289)
GO_REF:0000107		 RGD
Ensembl		 PMID:2531289 GO_REF:0000107 NCBI chr 4:19,628,902...19,700,467
Ensembl chr 4:18,677,101...18,745,409 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:18358471 RGD:401938603 NCBI chr15:56,360,647...56,428,703
Ensembl chr15:49,950,804...50,020,928 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 IMP RGD PMID:18667424 RGD:10054494 NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Nox4 NADPH oxidase 4 involved_in ISO
IEA		 (PMID:17942966)
GO_REF:0000107		 RGD
Ensembl		 PMID:17942966 GO_REF:0000107 NCBI chr 1:150,313,736...150,491,480
Ensembl chr 1:140,901,097...141,077,406 		JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:12890786 RGD:7775030 NCBI chr  X:111,912,967...112,171,037
Ensembl chr  X:107,260,898...107,368,314 		JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:17942966), (PMID:19019919)		 Ensembl
UniProt
RGD		 PMID:10644978 PMID:10734101 PMID:11788434 PMID:12070119 PMID:17942966 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 7:113,419,882...113,438,343
Ensembl chr 7:111,540,345...111,557,984 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:19019919)		 UniProt
RGD		 PMID:19019919 GO_REF:0000024 NCBI chr18:56,770,348...56,809,228
Ensembl chr18:54,499,964...54,538,843 		JBrowse link
G Prkd2 protein kinase D2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:17226786)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:17226786 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,640,095...86,670,476
Ensembl chr 1:77,513,986...77,542,376 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:21451101 RGD:10041071 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rgcc regulator of cell cycle involved_in IDA PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chr15:61,071,574...61,084,408
Ensembl chr15:54,662,483...54,681,141 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO
IEA		 UniProtKB:P09038|UniProtKB:P15692-4 (PMID:16774925)
GO_REF:0000107		 RGD
Ensembl		 PMID:16774925 GO_REF:0000107 NCBI chr 1:63,935,627...64,064,952
Ensembl chr 1:55,262,530...55,391,693 		JBrowse link
G Tnf tumor necrosis factor IDA RGD PMID:9395232 RGD:14696805 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr10:15,247,525...15,255,573
Ensembl chr10:14,742,621...14,751,050 		JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12930902)		 UniProt
RGD		 PMID:12930902 GO_REF:0000024 NCBI chr19:51,691,776...51,702,076
Ensembl chr19:34,781,856...34,792,578 		JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:88,372,349...88,390,815
Ensembl chr 7:86,482,588...86,498,212 		JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:8123045 RGD:11535022 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645 		JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:11595739) RGD PMID:11595739 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in ISO (PMID:10608893) RGD PMID:10608893 NCBI chr10:92,212,303...92,222,849
Ensembl chr10:91,712,586...91,723,008 		JBrowse link
G Rfc2 replication factor C subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12930902)		 UniProt
RGD		 PMID:12930902 GO_REF:0000024 NCBI chr12:27,756,920...27,770,049
Ensembl chr12:22,120,010...22,133,557 		JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:5,836,546...5,847,331
Ensembl chr12:1,000,994...1,011,778 		JBrowse link
G Rfc4 replication factor C subunit 4 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr11:91,254,273...91,268,727
Ensembl chr11:77,749,638...77,764,122 		JBrowse link
G Rfc5 replication factor C subunit 5 involved_in ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:44,868,322...44,877,879
Ensembl chr12:39,207,484...39,217,312 		JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 7:54,578,654...54,591,428
Ensembl chr 7:52,692,725...52,706,944 		JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 2:176,063,529...176,088,180
Ensembl chr 2:173,765,698...173,790,757 		JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr14:101,193,057...101,205,935
Ensembl chr14:96,991,859...97,005,267 		JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 2:84,302,621...84,313,773
Ensembl chr 2:82,590,630...82,602,930 		JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr12:32,508,842...32,519,072
Ensembl chr12:26,872,574...26,883,337 		JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 4:119,546,730...119,563,973
Ensembl chr 4:117,989,232...118,006,580 		JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr11:40,196,619...40,208,328
Ensembl chr11:26,710,370...26,722,079 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of ISO
IEA		 (PMID:22723415)
GO_REF:0000107		 RGD
Ensembl		 PMID:22723415 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 acts_upstream_of_or_within ISO MGI:3849598 (PMID:15240872)
(PMID:23685356), (PMID:25467444)		 RGD PMID:15240872 PMID:23685356 PMID:25467444 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO
IEA		 (PMID:16275645)
GO_REF:0000107		 RGD
Ensembl		 PMID:16275645 GO_REF:0000107 NCBI chr 2:54,902,394...54,915,388
Ensembl chr 2:53,174,798...53,187,792 		JBrowse link
G Gch1 GTP cyclohydrolase 1 IMP RGD PMID:30690003 RGD:401717569 NCBI chr15:22,884,006...22,917,412
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:23935072) RGD PMID:23935072 NCBI chr 7:136,253,633...136,260,085
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of ISO
IEA		 (PMID:22633954)
GO_REF:0000107		 RGD
Ensembl		 PMID:22633954 GO_REF:0000107 NCBI chr14:9,918,630...9,938,072
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein acts_upstream_of ISO (PMID:27510903) RGD PMID:27510903 NCBI chr16:27,604,228...27,634,963
Ensembl chr16:22,837,588...22,868,293 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO
IEA		 (PMID:26482878), (PMID:26950371)
GO_REF:0000107		 RGD
Ensembl		 PMID:26482878 PMID:26950371 GO_REF:0000107 NCBI chr10:1,917,830...2,055,749
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:12768206), (PMID:12781132), (PMID:17237768) RGD PMID:12768206 PMID:12781132 PMID:17237768 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042 		JBrowse link
G Ptges3 prostaglandin E synthase 3 involved_in ISO (PMID:19740745) RGD PMID:19740745 NCBI chr 7:1,075,230...1,092,363
Ensembl chr 7:490,656...508,084 		JBrowse link
G Tcp1 t-complex 1 acts_upstream_of ISO
IEA		 (PMID:25467444)
GO_REF:0000107		 RGD
Ensembl		 PMID:25467444 GO_REF:0000107 NCBI chr 1:50,376,848...50,384,527
Ensembl chr 1:47,828,652...47,836,839 		JBrowse link
G Terc telomerase RNA component acts_upstream_of_or_within ISO MGI:1857930 (PMID:17982445) RGD PMID:17982445 NCBI chr 2:114,744,148...114,744,535 JBrowse link
G Tnks tankyrase involved_in ISO (PMID:11739745), (PMID:12782650), (PMID:18221737) RGD PMID:11739745 PMID:12782650 PMID:18221737 NCBI chr16:63,922,969...64,073,972
Ensembl chr16:57,225,094...57,366,260 		JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 acts_upstream_of ISO
IEA		 (PMID:23685356)
GO_REF:0000107		 RGD
Ensembl		 PMID:23685356 GO_REF:0000107 NCBI chr10:54,780,873...54,797,919
Ensembl chr10:54,282,105...54,298,929 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        biosynthetic process 8654
          macromolecule biosynthetic process 7646
            positive regulation of macromolecule biosynthetic process 2732
              positive regulation of DNA biosynthetic process 58
                positive regulation of DNA amplification 0
                positive regulation of DNA-directed DNA polymerase activity 10
                positive regulation of error-prone translesion synthesis 0
                positive regulation of reverse transcription 0
                positive regulation of telomere maintenance via telomerase 23
Path 2
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      metabolic process 12180
        primary metabolic process 10745
          nucleobase-containing compound metabolic process 5888
            nucleic acid metabolic process 5280
              nucleic acid biosynthetic process 4523
                DNA biosynthetic process 180
                  regulation of DNA biosynthetic process 101
                    positive regulation of DNA biosynthetic process 58
                      positive regulation of DNA amplification 0
                      positive regulation of DNA-directed DNA polymerase activity 10
                      positive regulation of error-prone translesion synthesis 0
                      positive regulation of reverse transcription 0
                      positive regulation of telomere maintenance via telomerase 23
paths to the root