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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of apoptotic cell clearance
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Accession:GO:2000425 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of apoptotic cell clearance.
Synonyms:exact_synonym: regulation of apoptotic cell removal;   regulation of efferocytosis;   regulation of programmed cell clearance


show annotations for term's descendants           Sort by:
regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgm2 transglutaminase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:12810961), (PMID:15905580)
GO_REF:0000107
(MGI:3580951|PMID:15905580), (MGI:3629478|PMID:12810961)
(PMID:7935379)		 UniProt
RGD
Ensembl		 PMID:7935379 PMID:12810961 PMID:15905580 GO_REF:0000024 GO_REF:0000107 MGI:3580951 MGI:3629478 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981 		JBrowse link
negative regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300lf Cd300 molecule-like family member F involved_in ISS
ISO		 GO_REF:0000024
(PMID:26768664)
(MGI:5819329|PMID:26768664)		 UniProt
RGD		 PMID:26768664 GO_REF:0000024 MGI:5819329 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:20826760) RGD PMID:20826760 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
positive regulation of apoptotic cell clearance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C2 complement C2 involved_in ISO (PMID:19302245) RGD PMID:19302245 NCBI chr20:3,951,474...3,970,376
Ensembl chr20:3,951,474...3,976,505 		JBrowse link
G C3 complement C3 involved_in ISO
IEA		 (PMID:19302245)
GO_REF:0000107		 RGD
Ensembl		 PMID:19302245 GO_REF:0000107 NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429 		JBrowse link
G C4a complement C4A involved_in ISO UniProtKB:P0C0L5 (PMID:19302245) RGD PMID:19302245 NCBI chr20:4,005,731...4,020,083
Ensembl chr20:4,005,731...4,020,080 		JBrowse link
G C4b complement C4B involved_in ISO UniProtKB:P0C0L4|UniProtKB:P0C0L5 (PMID:19302245) RGD PMID:19302245 NCBI chr20:4,197,371...4,211,684
Ensembl chr20:4,197,366...4,211,681 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in ISO (MGI:4943793|PMID:20691665)
(PMID:20691665)		 RGD PMID:20691665 MGI:4943793 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226 		JBrowse link
G Cd300lf Cd300 molecule-like family member F involved_in ISS
ISO		 GO_REF:0000024
(MGI:5301804|PMID:21865548), (MGI:5819329|PMID:26768664)
(PMID:21865548), (PMID:26768664)		 UniProt
RGD		 PMID:21865548 PMID:26768664 GO_REF:0000024 MGI:5301804 MGI:5819329 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041 		JBrowse link
positive regulation of engulfment of apoptotic cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16908670)
(MGI:3662940|PMID:16908670)		 Alzheimers_University_of_Toronto
RGD		 PMID:16908670 GO_REF:0000024 MGI:3662940 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:24990881) RGD PMID:24990881 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20133
    cellular process 19325
      vesicle-mediated transport 1638
        endocytosis 735
          phagocytosis 234
            apoptotic cell clearance 45
              regulation of apoptotic cell clearance 10
                negative regulation of apoptotic cell clearance + 2
                positive regulation of apoptotic cell clearance + 8
Path 2
Term Annotations click to browse term
  biological_process 20133
    biological regulation 13561
      regulation of biological process 13134
        regulation of localization 2385
          regulation of transport 1946
            regulation of vesicle-mediated transport 635
              regulation of endocytosis 365
                regulation of phagocytosis 121
                  regulation of apoptotic cell clearance 10
                    negative regulation of apoptotic cell clearance + 2
                    positive regulation of apoptotic cell clearance + 8
paths to the root