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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of DNA biosynthetic process
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Accession:GO:2000278 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of DNA biosynthetic process.
Synonyms:exact_synonym: regulation of DNA anabolism;   regulation of DNA biosynthesis;   regulation of DNA formation;   regulation of DNA synthesis


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regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO MGI:MGI:1933751 (MGI:MGI:3617096|PMID:11981756) RGD PMID:11981756 MGI:MGI:3617096 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Pdgfa platelet derived growth factor subunit A NOT ISS
ISO
GO_REF:0000024
(PMID:11788434), (PMID:19019919)
UniProt
RGD
PMID:11788434, PMID:19019919 GO_REF:0000024 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Sh2b1 SH2B adaptor protein 1 ISO (MGI:MGI:5009204|PMID:10644978) RGD PMID:10644978 MGI:MGI:5009204 NCBI chr 1:197,878,839...197,888,223
Ensembl chr 1:197,878,840...197,886,759
JBrowse link
G Tfdp1 transcription factor Dp-1 ISO (MGI:MGI:3525422|PMID:15448153) RGD PMID:15448153 MGI:MGI:3525422 NCBI chr16:81,088,642...81,127,244
Ensembl chr16:81,089,292...81,127,257
JBrowse link
G Tom1l1 target of myb1 like 1 membrane trafficking protein NOT ISO (PMID:16479011) RGD PMID:16479011 NCBI chr10:78,173,847...78,219,805
Ensembl chr10:78,173,847...78,219,793
JBrowse link
negative regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:12070119)
GO_REF:0000024
RGD
UniProt
PMID:12070119 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:11139470) RGD PMID:11139470 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:11595739) RGD PMID:11595739 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Chek1 checkpoint kinase 1 IMP RGD PMID:12429946 RGD:2316115 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Dach1 dachshund family transcription factor 1 ISO (PMID:16980615) RGD PMID:16980615 NCBI chr15:82,095,003...82,482,272
Ensembl chr15:82,099,159...82,482,009
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ISO
IEA
(MGI:MGI:76992|PMID:7559602)
GO_REF:0000107
RGD
Ensembl
PMID:7559602 GO_REF:0000107, MGI:MGI:76992 NCBI chr 4:9,881,505...9,908,693
Ensembl chr 4:9,882,904...9,908,689
JBrowse link
G Dusp1 dual specificity phosphatase 1 IDA RGD PMID:10446064 RGD:7771571 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:14702389 RGD:8662403 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:23271285 RGD:9831181 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Niban2 niban apoptosis regulator 2 ISO (PMID:14602737), (PMID:17569660), (PMID:20032057) RGD PMID:14602737, PMID:17569660, PMID:20032057 NCBI chr 3:11,921,715...11,971,327
Ensembl chr 3:11,921,715...11,971,327
JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:12746286 RGD:1580115 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Rgn regucalcin IMP RGD PMID:11500948 RGD:9590199 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:11502571 RGD:70312 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 ISO (PMID:17548428) RGD PMID:17548428 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit NOT ISO (PMID:18812185) RGD PMID:18812185 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Mcrs1 microspherule protein 1 ISO (PMID:15044100) RGD PMID:15044100 NCBI chr 7:140,910,420...140,919,234
Ensembl chr 7:140,910,423...140,919,234
JBrowse link
G Men1 menin 1 ISO (PMID:12837246) RGD PMID:12837246 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:16522649) RGD PMID:16522649 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
(PMID:15632080)
PMID:21873635
RGD PMID:15632080, PMID:21873635 RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:16556873 RGD:1580657 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Ten1 TEN1 subunit of CST complex IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:10597287) RGD PMID:10597287 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of telomerase RNA reverse transcriptase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 ISO (PMID:24528514) RGD PMID:24528514 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
UniProtKB:Q9NUX5 (PMID:15181449), (PMID:15380063)
PMID:21873635
RGD PMID:15181449, PMID:15380063, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Ctc1 CST telomere replication complex component 1 ISO (PMID:22763445) RGD PMID:22763445 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Dcp2 decapping mRNA 2 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Exosc10 exosome component 10 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
JBrowse link
G Gnl3l G protein nucleolar 3 like ISO (PMID:18082603) RGD PMID:18082603 NCBI chr  X:20,037,558...20,070,505
Ensembl chr  X:20,034,882...20,070,578
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:23935072)
GO_REF:0000107
RGD
Ensembl
PMID:23935072 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:18082603) RGD PMID:18082603 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO
IBA
IEA
(PMID:18082603)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18082603, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Nat10 N-acetyltransferase 10 ISO (PMID:18082603) RGD PMID:18082603 NCBI chr 3:93,658,119...93,698,136
Ensembl chr 3:93,658,117...93,698,136
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:23657261) RGD PMID:23657261 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO UniProtKB:Q96AP0 (PMID:15181449) RGD PMID:15181449 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stn1 STN1 subunit of CST complex IEA
ISO
GO_REF:0000107
(PMID:22763445)
Ensembl
RGD
PMID:22763445 GO_REF:0000107 NCBI chr 1:267,281,786...267,315,714
Ensembl chr 1:267,281,764...267,315,729
JBrowse link
G Ten1 TEN1 subunit of CST complex ISO
IBA
(PMID:22763445)
PMID:21873635
RGD PMID:22763445, PMID:21873635 RGD:13792537 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:26950371) RGD PMID:26950371 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:11971978), (PMID:17055345) RGD PMID:11971978, PMID:17055345 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO (PMID:10581025), (PMID:15133513) RGD PMID:10581025, PMID:15133513 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 IMP RGD PMID:19254952 RGD:5509898 NCBI chr10:57,040,252...57,048,045
Ensembl chr10:57,040,267...57,048,134
JBrowse link
G C3ar1 complement C3a receptor 1 IMP RGD PMID:23713944 RGD:7411623 NCBI chr 4:155,681,767...155,691,240
Ensembl chr 4:155,684,029...155,690,869
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:17267544 RGD:2303063 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16005543 RGD:5131269 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:22446327 RGD:10401140 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Egf epidermal growth factor IDA RGD PMID:3093142 RGD:10395243 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 ISO
ISS
(PMID:21653700)
GO_REF:0000024
RGD
UniProt
PMID:21653700 GO_REF:0000024 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IDA RGD PMID:16937468 RGD:9685728 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:12721208 RGD:10045365 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hgf hepatocyte growth factor ISO (PMID:2531289) RGD PMID:2531289 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(PMID:9924025)
GO_REF:0000024
RGD
UniProt
PMID:9924025 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Nox4 NADPH oxidase 4 ISO (MGI:MGI:5009390|PMID:17942966) RGD PMID:17942966 MGI:MGI:5009390 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:12890786 RGD:7775030 NCBI chr  X:114,784,452...115,042,683
Ensembl chr  X:114,929,029...115,036,669
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEA
ISO
ISS
GO_REF:0000107
(PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:16530387), (PMID:17942966), (PMID:19019919)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10644978, PMID:10734101, PMID:11788434, PMID:12070119, PMID:16530387, PMID:17942966, PMID:19019919 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO
ISS
(MGI:MGI:5284758|PMID:19019919)
GO_REF:0000024
RGD
UniProt
PMID:19019919 GO_REF:0000024, MGI:MGI:5284758 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Prkd2 protein kinase D2 ISO
ISS
(MGI:MGI:5306299|PMID:17226786)
GO_REF:0000024
RGD
UniProt
PMID:17226786 GO_REF:0000024, MGI:MGI:5306299 NCBI chr 1:78,767,911...78,796,223
Ensembl chr 1:78,767,911...78,796,231
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:21451101 RGD:10041071 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rgcc regulator of cell cycle IDA PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO UniProtKB:P09038|UniProtKB:P15692-4 (PMID:16774925) RGD PMID:16774925 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP PMID:16530387 UniProt PMID:16530387 RGD:8553998 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tnf tumor necrosis factor IDA RGD PMID:9395232 RGD:14696805 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Vegfa vascular endothelial growth factor A ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr10:15,090,762...15,098,825
Ensembl chr10:15,090,316...15,098,791
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 ISO
ISS
(PMID:12930902)
GO_REF:0000024
RGD
UniProt
PMID:12930902 GO_REF:0000024 NCBI chr19:39,077,580...39,087,880
Ensembl chr19:39,077,580...39,087,880
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:94,759,076...94,774,787
Ensembl chr 7:94,758,800...94,774,569
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:8123045 RGD:11535022 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Pcna proliferating cell nuclear antigen ISO (PMID:11595739) RGD PMID:11595739 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit ISO (PMID:10608893), (PMID:19837034), (PMID:19858216), (PMID:26123486) RGD PMID:10608893, PMID:19837034, PMID:19858216, PMID:26123486 NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259
JBrowse link
G Rfc2 replication factor C subunit 2 ISO
ISS
(PMID:12930902)
GO_REF:0000024
RGD
UniProt
PMID:12930902 GO_REF:0000024 NCBI chr12:25,130,375...25,143,480
Ensembl chr12:25,130,377...25,143,480
JBrowse link
G Rfc3 replication factor C subunit 3 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:1,460,581...1,471,344
Ensembl chr12:1,460,538...1,471,357
JBrowse link
G Rfc4 replication factor C subunit 4 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr11:81,358,592...81,373,044
Ensembl chr11:81,358,592...81,373,043
JBrowse link
G Rfc5 replication factor C subunit 5 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:44,931,494...44,941,051
Ensembl chr12:44,931,494...44,941,324
JBrowse link
positive regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
(PMID:17237768)
PMID:21873635
RGD PMID:17237768, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) RGD PMID:21531765 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 7:60,106,532...60,122,779
Ensembl chr 7:60,109,974...60,122,805
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr14:107,767,392...107,780,270
Ensembl chr14:107,767,392...107,780,270
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO MGI:MGI:3849598 (MGI:MGI:3047190|PMID:15240872)
(PMID:25467444)
RGD PMID:15240872, PMID:25467444 MGI:MGI:3047190 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:16545136) RGD PMID:16545136 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO (PMID:19015635), (PMID:20938050) RGD PMID:19015635, PMID:20938050 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Hmbox1 homeobox containing 1 ISO
IBA
(PMID:23685356)
PMID:21873635
RGD PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Klf4 Kruppel like factor 4 ISO (PMID:20629177) RGD PMID:20629177 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr12:40,510,378...40,529,332
Ensembl chr12:40,510,378...40,529,338
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:5810267|PMID:9637678) RGD PMID:9637678 MGI:MGI:5810267 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO
IEA
(PMID:27510903)
GO_REF:0000107
RGD
Ensembl
PMID:27510903 GO_REF:0000107 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nek7 NIMA-related kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr13:55,485,759...55,617,534
Ensembl chr13:55,488,531...55,561,750
JBrowse link
G Nvl nuclear VCP-like ISO
IBA
(PMID:22226966)
PMID:21873635
RGD PMID:22226966, PMID:21873635 RGD:13792537 NCBI chr13:99,410,026...99,468,783
Ensembl chr13:99,410,026...99,468,778
JBrowse link
G Parm1 prostate androgen-regulated mucin-like protein 1 IMP
IBA
PMID:12772192
PMID:21873635
UniProt
GO_Central
PMID:12772192, PMID:21873635 RGD:8553456, RGD:13792537 NCBI chr14:17,972,914...18,076,870
Ensembl chr14:17,969,219...18,076,907
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878) RGD PMID:26482878 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr20:40,616,868...40,712,598
Ensembl chr20:40,618,128...40,712,592
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:100,853,475...100,859,202
Ensembl chr 1:100,853,902...100,859,084
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:15181449), (PMID:16043710), (PMID:17237768) RGD PMID:15181449, PMID:16043710, PMID:17237768 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Prkcq protein kinase C, theta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO (MGI:MGI:5819359|PMID:10197982)
(PMID:10197982), (PMID:19740745)
RGD PMID:10197982, PMID:19740745 MGI:MGI:5819359 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 1:48,025,664...48,033,343
Ensembl chr 1:48,025,663...48,033,396
JBrowse link
G Tnks tankyrase ISO (PMID:12782650) RGD PMID:12782650 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 ISS
ISO
GO_REF:0000024
(MGI:MGI:6189679|PMID:29804836)
(PMID:19179534), (PMID:23685356), (PMID:25467444), (PMID:29804836)
UniProt
RGD
PMID:19179534, PMID:23685356, PMID:25467444, PMID:29804836 GO_REF:0000024, MGI:MGI:6189679 NCBI chr10:56,169,024...56,185,800
Ensembl chr10:56,169,025...56,185,857
JBrowse link
positive regulation of telomerase RNA reverse transcriptase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO (MGI:MGI:5438900|PMID:22633954) RGD PMID:22633954 MGI:MGI:5438900 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO (PMID:17237768) RGD PMID:17237768 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Atm ATM serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) RGD PMID:26586427 MGI:MGI:5705431 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Atr ATR serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) RGD PMID:26586427 MGI:MGI:5705431 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) RGD PMID:21531765 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 7:60,106,532...60,122,779
Ensembl chr 7:60,109,974...60,122,805
JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:187,669,051...187,693,610
Ensembl chr 2:187,668,796...187,693,610
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr14:107,767,392...107,780,270
Ensembl chr14:107,767,392...107,780,270
JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:84,667,578...84,678,730
Ensembl chr 2:84,667,633...84,678,790
JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A ISO (PMID:25467444) RGD PMID:25467444 NCBI chr12:30,491,584...30,501,813
Ensembl chr12:30,491,416...30,501,860
JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 4:117,235,023...117,252,265
Ensembl chr 4:117,235,023...117,252,265
JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr11:27,130,172...27,141,881
Ensembl chr11:27,130,172...27,141,881
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO MGI:MGI:3849598 (MGI:MGI:3047190|PMID:15240872) RGD PMID:15240872 MGI:MGI:3047190 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:16275645) RGD PMID:16275645 NCBI chr 2:53,797,954...53,811,134
Ensembl chr 2:53,797,954...53,811,134
JBrowse link
G Hmbox1 homeobox containing 1 ISO
IBA
(PMID:23685356)
PMID:21873635
RGD PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:23935072)
GO_REF:0000107
RGD
Ensembl
PMID:23935072 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr12:40,510,378...40,529,332
Ensembl chr12:40,510,378...40,529,338
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nek7 NIMA-related kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr13:55,485,759...55,617,534
Ensembl chr13:55,488,531...55,561,750
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878, PMID:26950371 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr20:40,616,868...40,712,598
Ensembl chr20:40,618,128...40,712,592
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:100,853,475...100,859,202
Ensembl chr 1:100,853,902...100,859,084
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:12768206), (PMID:12781132), (PMID:17237768) RGD PMID:12768206, PMID:12781132, PMID:17237768 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Prkcq protein kinase C, theta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 1:48,025,664...48,033,343
Ensembl chr 1:48,025,663...48,033,396
JBrowse link
G Terc telomerase RNA component ISO MGI:MGI:1857930 (MGI:MGI:3774867|PMID:17982445) RGD PMID:17982445 MGI:MGI:3774867 NCBI chr 2:116,432,723...116,433,110
Ensembl chr 2:116,432,691...116,433,110
JBrowse link
G Tnks tankyrase ISO (PMID:11739745), (PMID:12782650), (PMID:18221737) RGD PMID:11739745, PMID:12782650, PMID:18221737 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO (PMID:19188702) RGD PMID:19188702 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase NOT ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Hmbox1 homeobox containing 1 ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Nabp2 nucleic acid binding protein 2 NOT ISO (PMID:25589350) RGD PMID:25589350 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
G Parp4 poly (ADP-ribose) polymerase family, member 4 ISO (PMID:15169895) RGD PMID:15169895 NCBI chr15:36,809,362...36,911,167 JBrowse link
regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO UniProtKB:Q9NUX5 (PMID:26586433) RGD PMID:26586433 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
UniProtKB:Q13315 (PMID:26586433)
PMID:21873635
RGD PMID:26586433, PMID:21873635 RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO
IBA
(PMID:19864690), (PMID:23685356)
PMID:21873635
RGD PMID:19864690, PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    regulation of biological process 13071
      regulation of metabolic process 7007
        regulation of macromolecule metabolic process 6492
          regulation of DNA metabolic process 392
            regulation of DNA biosynthetic process 125
              negative regulation of DNA biosynthetic process + 44
              positive regulation of DNA biosynthetic process + 79
              regulation of DNA amplification + 0
              regulation of DNA-directed DNA polymerase activity + 10
              regulation of error-prone translesion synthesis + 0
              regulation of reverse transcription + 0
              regulation of telomerase activity + 52
              regulation of telomere maintenance via telomerase + 51
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      cellular metabolic process 11065
        cellular aromatic compound metabolic process 5708
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              DNA metabolic process 919
                regulation of DNA metabolic process 392
                  regulation of DNA biosynthetic process 125
                    negative regulation of DNA biosynthetic process + 44
                    positive regulation of DNA biosynthetic process + 79
                    regulation of DNA amplification + 0
                    regulation of DNA-directed DNA polymerase activity + 10
                    regulation of error-prone translesion synthesis + 0
                    regulation of reverse transcription + 0
                    regulation of telomerase activity + 52
                    regulation of telomere maintenance via telomerase + 51
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.