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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of rRNA processing
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Accession:GO:2000232 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of rRNA processing.
Synonyms:related_synonym: regulation of 35S primary transcript processing



show annotations for term's descendants           Sort by:
 
regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl18 methyltransferase like 18 involved_in ISS
ISO
GO_REF:0000024
(PMID:33693809)
UniProt
RGD
PMID:33693809 GO_REF:0000024 NCBI chr13:76,345,888...76,348,798
Ensembl chr13:76,345,957...76,348,836
JBrowse link
G Ncl nucleolin IDA RGD PMID:2049089 RGD:9588272 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:19208757)
(MGI:6117526|PMID:29273634)
RGD PMID:19208757 PMID:29273634 MGI:6117526 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 involved_in ISO (PMID:31815440) RGD PMID:31815440 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
negative regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:26867678) RGD PMID:26867678 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor acts_upstream_of_or_within ISO (PMID:20663920) RGD PMID:20663920 NCBI chr 4:133,213,357...133,305,586
Ensembl chr 4:133,213,361...133,305,586
JBrowse link
positive regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr12:21,629,551...21,640,758
Ensembl chr12:21,629,536...21,640,751
JBrowse link
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 2:38,343,086...38,366,760
Ensembl chr 2:38,354,854...38,368,227
JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr17:58,051,700...58,093,895
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G Riok1 RIO kinase 1 involved_in ISO (PMID:22072790) RGD PMID:22072790 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900
JBrowse link
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512
JBrowse link
G Sirt7 sirtuin 7 involved_in ISO
ISS
(PMID:26867678)
GO_REF:0000024
RGD
UniProt
PMID:26867678 GO_REF:0000024 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172
JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 1:204,103,298...204,104,151 JBrowse link
G Utp15 UTP15, small subunit processome component involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773
JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr75 WD repeat domain 75 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 9:47,903,166...47,933,399
Ensembl chr 9:47,903,200...47,933,399
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      regulation of metabolic process 6931
        regulation of macromolecule metabolic process 6422
          regulation of RNA metabolic process 3649
            regulation of rRNA processing 16
              negative regulation of rRNA processing 2
              positive regulation of rRNA processing 10
Path 2
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      cellular metabolic process 10922
        cellular aromatic compound metabolic process 5738
          nucleobase-containing compound metabolic process 5513
            nucleic acid metabolic process 5019
              RNA metabolic process 4480
                ncRNA metabolic process 596
                  rRNA metabolic process 292
                    rRNA processing 257
                      regulation of rRNA processing 16
                        negative regulation of rRNA processing 2
                        positive regulation of rRNA processing 10
paths to the root