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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of rRNA processing
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Accession:GO:2000232 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of rRNA processing.
Synonyms:related_synonym: regulation of 35S primary transcript processing


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regulation of rRNA processing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncl nucleolin IDA RGD PMID:2049089 RGD:9588272 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Usp36 ubiquitin specific peptidase 36 ISO (PMID:19208757)
(MGI:6117526|PMID:29273634)
RGD PMID:19208757 PMID:29273634 MGI:6117526 NCBI chr10:107,292,828...107,324,355
Ensembl chr10:107,292,828...107,324,355
JBrowse link
negative regulation of rRNA processing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kat2b lysine acetyltransferase 2B ISO (PMID:26867678) RGD PMID:26867678 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor ISO (PMID:20663920) RGD PMID:20663920 NCBI chr 4:133,037,515...133,127,183
NCBI chr 4:133,131,711...133,133,170
Ensembl chr 4:133,037,014...133,131,953
JBrowse link
positive regulation of rRNA processing term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor ISO (PMID:25851604) RGD PMID:25851604 NCBI chr12:24,669,626...24,680,833
Ensembl chr12:24,669,449...24,680,818
JBrowse link
G Dimt1 DIMT1 rRNA methyltransferase and ribosome maturation factor ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 2:38,120,562...38,144,871
Ensembl chr 2:38,120,592...38,144,327
JBrowse link
G Heatr1 HEAT repeat containing 1 ISO (PMID:17699751) RGD PMID:17699751 NCBI chr17:66,446,135...66,488,303
Ensembl chr17:66,446,162...66,619,250
JBrowse link
G Riok1 RIO kinase 1 ISO (PMID:22072790) RGD PMID:22072790 NCBI chr17:27,429,421...27,452,353
Ensembl chr17:27,429,416...27,452,314
JBrowse link
G Riok2 RIO kinase 2 ISO (PMID:19564402) RGD PMID:19564402 NCBI chr 1:59,130,008...59,146,457
Ensembl chr 1:59,129,951...59,146,776
JBrowse link
G Sirt7 sirtuin 7 ISS
ISO
GO_REF:0000024
(PMID:26867678)
UniProt
RGD
PMID:26867678 GO_REF:0000024 NCBI chr10:109,796,046...109,802,821
Ensembl chr10:109,796,020...109,802,739
JBrowse link
G Trmt112 tRNA methyltransferase subunit 11-2 ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 1:222,167,927...222,168,780
Ensembl chr 1:222,167,927...222,168,776
JBrowse link
G Utp15 UTP15, small subunit processome component ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 2:28,351,925...28,370,315
Ensembl chr 2:28,353,854...28,370,261
JBrowse link
G Wdr43 WD repeat domain 43 ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 6:23,433,532...23,473,179
Ensembl chr 6:23,433,532...23,473,169
JBrowse link
G Wdr75 WD repeat domain 75 ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 9:52,687,845...52,717,808
Ensembl chr 9:52,687,868...52,717,809
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12101
      regulation of metabolic process 6915
        regulation of macromolecule metabolic process 6392
          regulation of RNA metabolic process 3611
            regulation of rRNA processing 14
              negative regulation of rRNA processing 2
              positive regulation of rRNA processing 10
Path 2
Term Annotations click to browse term
  biological_process 20045
    metabolic process 12101
      cellular metabolic process 11040
        cellular aromatic compound metabolic process 5710
          nucleobase-containing compound metabolic process 5498
            nucleic acid metabolic process 4988
              RNA metabolic process 4473
                ncRNA metabolic process 524
                  rRNA metabolic process 273
                    rRNA processing 261
                      regulation of rRNA processing 14
                        negative regulation of rRNA processing 2
                        positive regulation of rRNA processing 10
paths to the root