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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of stem cell population maintenance
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Accession:GO:2000036 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of stem cell population maintenance.
Synonyms:related_synonym: regulation of maintenance of pluripotency



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regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in IMP
ISO
(MGI:5487505|PMID:22367759) UniProt
MGI
PMID:22367759 GO_REF:0000096 MGI:4834177 MGI:5487505 NCBI chr 8:95,718,931...95,808,113
Ensembl chr 8:95,719,451...95,807,464
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO
IMP
IBA
(MGI:5487505|PMID:22367759)
(MGI:6201960|PMID:21873635)
MGI
UniProt
GO_Central
PMID:21873635 PMID:22367759 GO_REF:0000096 MGI:4834177 MGI:5487505 MGI:6201960 NCBI chr10:116,485,160...116,581,900
Ensembl chr10:116,485,161...116,581,511
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in IMP
ISO
IBA
(MGI:5487505|PMID:22367759)
(MGI:6201960|PMID:21873635)
UniProt
MGI
GO_Central
PMID:21873635 PMID:22367759 GO_REF:0000096 MGI:4834177 MGI:5487505 MGI:6201960 NCBI chr 7:3,645,247...3,661,109
Ensembl chr 7:3,645,268...3,661,109
JBrowse link
G Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) involved_in IMP (MGI:5559905|PMID:24394384) UniProt PMID:24394384 MGI:5559905 NCBI chr 8:4,284,781...4,325,140
Ensembl chr 8:4,285,382...4,325,413
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:120,361,268...120,476,469
Ensembl chr10:120,361,275...120,476,469
JBrowse link
G Kat2a K(lysine) acetyltransferase 2A involved_in IMP (MGI:6377803|PMID:30270482) UniProt PMID:30270482 MGI:6377803 NCBI chr11:100,704,746...100,712,485
Ensembl chr11:100,704,746...100,712,465
JBrowse link
G Kdm3a lysine (K)-specific demethylase 3A acts_upstream_of_or_within IGI (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr 6:71,588,970...71,632,990
Ensembl chr 6:71,588,972...71,632,990
JBrowse link
G Mir294 microRNA 294 acts_upstream_of_or_within IDA (MGI:4868529|PMID:20975942) MGI PMID:20975942 MGI:4868529 NCBI chr 7:3,220,641...3,220,724
Ensembl chr 7:3,220,641...3,220,724
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within IMP (MGI:5467164|PMID:22977234) MGI PMID:22977234 MGI:5467164 NCBI chr 2:165,992,637...166,073,242
Ensembl chr 2:165,992,636...166,073,242
JBrowse link
G Nfya nuclear transcription factor-Y alpha acts_upstream_of_or_within IDA (MGI:5474438|PMID:22969033) MGI PMID:22969033 MGI:5474438 NCBI chr17:48,386,885...48,409,820
Ensembl chr17:48,386,885...48,409,906
JBrowse link
G Ptn pleiotrophin involved_in IMP (MGI:5293574|PMID:21791434) UniProt PMID:21791434 MGI:5293574 NCBI chr 6:36,714,924...36,810,179
Ensembl chr 6:36,714,929...36,810,220
JBrowse link
G Sav1 salvador family WW domain containing 1 acts_upstream_of_or_within IMP (MGI:3785211|PMID:18369314) MGI PMID:18369314 MGI:3785211 NCBI chr12:69,965,009...69,988,141
Ensembl chr12:69,965,012...69,987,002
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within IMP (MGI:3696007|PMID:17199044) MGI PMID:17199044 MGI:3696007 NCBI chr 6:29,735,497...29,761,366
Ensembl chr 6:29,735,503...29,761,365
JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 acts_upstream_of_or_within IMP (MGI:4421485|PMID:19850742) MGI PMID:19850742 MGI:4421485 NCBI chr 4:115,056,426...115,071,755
Ensembl chr 4:115,056,426...115,071,755
JBrowse link
G Tcf7l1 transcription factor 7 like 1 (T cell specific, HMG box) acts_upstream_of_or_within IMP (MGI:3777490|PMID:18347094), (MGI:3804326|PMID:18467660) MGI PMID:18347094 PMID:18467660 MGI:3777490 MGI:3804326 NCBI chr 6:72,626,371...72,789,045
Ensembl chr 6:72,626,378...72,789,254
JBrowse link
G Tcl1 T cell lymphoma breakpoint 1 acts_upstream_of_or_within IGI (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr12:105,216,753...105,222,737
Ensembl chr12:105,216,750...105,222,793
JBrowse link
G Wdr43 WD repeat domain 43 involved_in IMP (MGI:6323527|PMID:31128943) UniProt PMID:31128943 MGI:6323527 NCBI chr17:71,616,178...71,659,031
Ensembl chr17:71,615,895...71,659,031
JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 involved_in IMP (MGI:6158697|PMID:29547716) UniProt PMID:29547716 MGI:6158697 NCBI chr14:75,284,306...75,344,433
Ensembl chr14:75,284,373...75,344,426
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within IMP (MGI:4430439|PMID:20040500) MGI PMID:20040500 MGI:4430439 NCBI chr11:83,850,209...83,905,917
Ensembl chr11:83,850,063...83,905,819
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within IMP (MGI:86404|PMID:9056639) MGI PMID:9056639 MGI:86404 NCBI chr 2:172,868,012...172,940,321
Ensembl chr 2:172,868,012...172,940,321
JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl2 lysyl oxidase-like 2 involved_in IDA (MGI:6107312|PMID:25959397) UniProt PMID:25959397 MGI:6107312 NCBI chr14:69,608,692...69,695,834
Ensembl chr14:69,609,068...69,695,834
JBrowse link
G Wnt9b wingless-type MMTV integration site family, member 9B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:103,727,362...103,775,272
Ensembl chr11:103,727,364...103,749,821
JBrowse link
G Zfp706 zinc finger protein 706 involved_in IMP (MGI:5640939|PMID:24412312) UniProt PMID:24412312 MGI:5640939 NCBI chr15:36,997,027...37,007,402
Ensembl chr15:36,997,027...37,007,773
JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbh limb-bud and heart involved_in IMP (MGI:5634223|PMID:25655704) CAFA PMID:25655704 MGI:5634223 NCBI chr17:72,918,305...72,941,946
Ensembl chr17:72,918,305...72,941,947
JBrowse link
G Trp63 transformation related protein 63 involved_in IMP (MGI:5634223|PMID:25655704) CAFA PMID:25655704 MGI:5634223 NCBI chr16:25,683,763...25,892,088
Ensembl chr16:25,683,763...25,892,102
JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen related receptor, beta involved_in IDA
IMP
(MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477)
(MGI:5440110|PMID:23019124), (MGI:5887187|PMID:26206133)
UniProt PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chr12:86,361,117...86,521,628
Ensembl chr12:86,361,117...86,521,628
JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B acts_upstream_of_or_within IDA (MGI:5433809|PMID:21540074) MGI PMID:21540074 MGI:5433809 NCBI chr 5:122,870,664...122,989,270
Ensembl chr 5:122,870,665...122,989,823
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 involved_in IMP (MGI:5440110|PMID:23019124) UniProt PMID:23019124 MGI:5440110 NCBI chr 2:165,992,637...166,073,242
Ensembl chr 2:165,992,636...166,073,242
JBrowse link
G Prdm14 PR domain containing 14 involved_in IMP (MGI:5787734|PMID:26523391), (MGI:5788595|PMID:27281218) UniProt PMID:26523391 PMID:27281218 MGI:5787734 MGI:5788595 NCBI chr 1:13,113,428...13,127,163
Ensembl chr 1:13,113,457...13,127,163
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:77,265,494...77,286,432
Ensembl chr 5:77,265,491...77,286,432
JBrowse link
G Tead1 TEA domain family member 1 acts_upstream_of_or_within IGI (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 7:112,679,356...112,906,784
Ensembl chr 7:112,679,318...112,906,807
JBrowse link
G Tead3 TEA domain family member 3 acts_upstream_of_or_within IGI (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr17:28,331,671...28,350,805
Ensembl chr17:28,331,671...28,350,817
JBrowse link
G Tead4 TEA domain family member 4 acts_upstream_of_or_within IGI (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 6:128,227,143...128,300,813
Ensembl chr 6:128,224,288...128,300,823
JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IMP (MGI:4455217|PMID:20516196) MGI PMID:20516196 MGI:4455217 NCBI chr 9:7,931,999...8,004,638
Ensembl chr 9:7,931,999...8,004,596
JBrowse link
G Zfp322a zinc finger protein 322A involved_in IDA (MGI:6114965|PMID:24550733) UniProt PMID:24550733 MGI:6114965 NCBI chr13:23,353,103...23,369,208
Ensembl chr13:23,353,103...23,369,208
JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc myelocytomatosis oncogene involved_in IDA (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr15:61,985,341...61,990,361
Ensembl chr15:61,985,391...61,990,374
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like involved_in IDA (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr 8:123,996,310...124,021,397
Ensembl chr 8:123,996,318...124,021,397
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in IDA (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr19:8,774,354...8,786,417
Ensembl chr19:8,774,487...8,786,417
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28652
    multicellular organismal process 9013
      stem cell population maintenance 175
        regulation of stem cell population maintenance 39
          negative regulation of stem cell population maintenance + 7
          positive regulation of stem cell population maintenance + 12
          regulation of somatic stem cell population maintenance + 9
Path 2
Term Annotations click to browse term
  biological_process 28652
    biological regulation 13396
      regulation of biological process 12739
        regulation of multicellular organismal process 3053
          regulation of stem cell population maintenance 39
            negative regulation of stem cell population maintenance + 7
            positive regulation of stem cell population maintenance + 12
            regulation of somatic stem cell population maintenance + 9
paths to the root