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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of stem cell population maintenance
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Accession:GO:2000036 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of stem cell population maintenance.
Synonyms:related_synonym: regulation of maintenance of pluripotency
 never_in_taxon: NCBITaxon:4751 ! Fungi


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regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,038,456...58,138,364
Ensembl chr 2:58,038,483...58,137,622 		JBrowse link
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000117 GO_REF:0000118 NCBI chr10:12,057,269...12,174,405
Ensembl chr10:12,009,762...12,172,427 		JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IEA Ensembl
UniProt
TreeGrafter		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:103,057,392...103,070,612
Ensembl chr 1:103,057,542...103,066,887 		JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in ISO (MGI:5559905|PMID:24394384) UniProt PMID:24394384 MGI:5559905 NCBI chr20:52,648,878...52,677,578 JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,348,101...8,491,435 JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067 		JBrowse link
G KDM3A lysine demethylase 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17938240) Ensembl
MGI		 PMID:17938240 GO_REF:0000107 NCBI chr17:38,690,962...38,744,507
Ensembl chr17:38,690,979...38,743,739 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:22977234) MGI PMID:22977234 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G PTN pleiotrophin involved_in ISO (MGI:5293574|PMID:21791434) UniProt PMID:21791434 MGI:5293574 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814 		JBrowse link
G SAV1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18369314) Ensembl
MGI		 PMID:18369314 GO_REF:0000107 NCBI chr 8:27,034,606...27,061,926
Ensembl chr 8:27,022,628...27,062,611 		JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18347094) MGI PMID:18347094 NCBI chr17:39,699,958...39,859,167
Ensembl chr17:39,699,958...39,858,182 		JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (PMID:17938240) MGI PMID:17938240
G WDR43 WD repeat domain 43 involved_in ISO (MGI:6323527|PMID:31128943) UniProt PMID:31128943 MGI:6323527 NCBI chr17:22,769,281...22,813,559
Ensembl chr17:22,769,318...22,812,199 		JBrowse link
G ZC3H13 zinc finger CCCH-type containing 13 involved_in ISO (MGI:6158697|PMID:29547716) UniProt PMID:29547716 MGI:6158697 NCBI chr22:5,127,094...5,219,456
Ensembl chr22:5,133,249...5,217,908 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20040500) Ensembl
MGI		 PMID:20040500 GO_REF:0000107 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094 		JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9056639) Ensembl
MGI		 PMID:9056639 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
negative regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR145 microRNA mir-145 involved_in ISO (PMID:19409607) BHF-UCL PMID:19409607 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210 		JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOXL2 lysyl oxidase like 2 involved_in ISO (MGI:6107312|PMID:25959397) UniProt PMID:25959397 MGI:6107312 NCBI chr25:34,095,858...34,186,775
Ensembl chr25:34,126,335...34,185,969 		JBrowse link
G WNT9B Wnt family member 9B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654 		JBrowse link
G ZNF706 zinc finger protein 706 involved_in ISO (MGI:5640939|PMID:24412312) UniProt PMID:24412312 MGI:5640939 NCBI chr13:2,967,884...2,978,040
Ensembl chr13:2,969,983...2,976,279 		JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LBH LBH regulator of WNT signaling pathway involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:23,939,135...23,969,611
Ensembl chr17:23,938,772...24,022,140 		JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046 		JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ESRRB estrogen related receptor beta involved_in ISO (MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477)
(MGI:5440110|PMID:23019124), (MGI:5887187|PMID:26206133)		 UniProt PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332 		JBrowse link
G KDM2B lysine demethylase 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21540074) Ensembl
MGI		 PMID:21540074 GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 involved_in ISO (MGI:5440110|PMID:23019124) UniProt PMID:23019124 MGI:5440110 Ensembl chr24:34,585,305...34,728,674
Ensembl chr24:34,585,305...34,728,674 		JBrowse link
G PRDM14 PR/SET domain 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:19,203,798...19,220,149
Ensembl chr29:19,203,807...19,220,518 		JBrowse link
G REST RE1 silencing transcription factor involved_in ISO (PMID:21258371) UniProt PMID:21258371 NCBI chr13:49,041,082...49,062,596
Ensembl chr13:49,041,047...49,059,388 		JBrowse link
G SIRT6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,412,989...55,424,944
Ensembl chr20:55,412,646...55,424,944 		JBrowse link
G TEAD1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO (PMID:20516196) MGI PMID:20516196 NCBI chr21:35,667,862...35,935,180
Ensembl chr21:35,566,865...35,934,438 		JBrowse link
G TEAD3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO (PMID:20516196) MGI PMID:20516196 NCBI chr12:4,610,663...4,627,817
Ensembl chr12:4,611,144...4,632,888 		JBrowse link
G TEAD4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO (PMID:20516196) MGI PMID:20516196 NCBI chr27:41,744,100...41,783,223
Ensembl chr27:41,748,871...41,803,556 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20516196) Ensembl
MGI		 PMID:20516196 GO_REF:0000107 NCBI chr 5:29,394,760...29,495,977
Ensembl chr 5:29,394,541...29,496,251 		JBrowse link
G ZNF322 zinc finger protein 322 involved_in ISO (MGI:6114965|PMID:24550733) UniProt PMID:24550733 MGI:6114965 NCBI chr35:24,374,689...24,397,793
Ensembl chr35:24,377,632...24,378,840 		JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISS UniProt GO_REF:0000024 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309 		JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17199044) Ensembl
MGI		 PMID:17199044 GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:9,646,516...9,674,318
Ensembl chr 4:9,646,510...9,673,148 		JBrowse link
G TAF6L TATA-box binding protein associated factor 6 like involved_in ISO (MGI:6323493|PMID:31005419) UniProt PMID:31005419 MGI:6323493 NCBI chr18:53,898,748...53,910,836
Ensembl chr18:53,898,732...53,910,454 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19850742) Ensembl
MGI		 PMID:19850742 GO_REF:0000107 NCBI chr15:13,446,752...13,462,038
Ensembl chr15:13,449,481...13,462,047 		JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18467660) MGI PMID:18467660 NCBI chr17:39,699,958...39,859,167
Ensembl chr17:39,699,958...39,858,182 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    multicellular organismal process 8083
      stem cell population maintenance 175
        regulation of stem cell population maintenance 39
          negative regulation of stem cell population maintenance + 8
          positive regulation of stem cell population maintenance + 13
          regulation of somatic stem cell population maintenance + 13
Path 2
Term Annotations click to browse term
  biological_process 17917
    biological regulation 12438
      regulation of biological process 12078
        regulation of multicellular organismal process 3298
          regulation of stem cell population maintenance 39
            negative regulation of stem cell population maintenance + 8
            positive regulation of stem cell population maintenance + 13
            regulation of somatic stem cell population maintenance + 13
paths to the root