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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of stem cell population maintenance
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Accession:GO:2000036 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of stem cell population maintenance.
Synonyms:related_synonym: regulation of maintenance of pluripotency



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regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:22367759)
(MGI:5487505|PMID:22367759)
RGD PMID:22367759 MGI:5487505 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in IBA
ISO
PMID:21873635
(PMID:22367759)
(MGI:5487505|PMID:22367759)
RGD PMID:22367759 PMID:21873635 MGI:5487505, RGD:13792537 NCBI chr 7:52,130,444...52,222,338
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in ISO
IBA
(PMID:22367759)
(MGI:5487505|PMID:22367759)
PMID:21873635
RGD PMID:22367759 PMID:21873635 MGI:5487505, RGD:13792537 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (MGI:5559905|PMID:24394384) RGD PMID:24394384 MGI:5559905 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:17624332)
UniProt
RGD
PMID:17624332 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (MGI:6377803|PMID:30270482) RGD PMID:30270482 MGI:6377803 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Kdm3a lysine demethylase 3A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1097166 (MGI:3759699|PMID:17938240)
Ensembl
RGD
PMID:17938240 GO_REF:0000107 MGI:3759699 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (MGI:5467164|PMID:22977234) RGD PMID:22977234 MGI:5467164 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha acts_upstream_of_or_within ISO (MGI:5474438|PMID:22969033) RGD PMID:22969033 MGI:5474438 NCBI chr 9:12,587,437...12,613,911
Ensembl chr 9:12,586,259...12,613,898
JBrowse link
G Ptn pleiotrophin involved_in ISS
ISO
GO_REF:0000024
(MGI:5293574|PMID:21791434)
UniProt
RGD
PMID:21791434 GO_REF:0000024 MGI:5293574 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO MGI:3790763 (MGI:3785211|PMID:18369314) RGD PMID:18369314 MGI:3785211 NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:1934268|MGI:2445832 (MGI:3696007|PMID:17199044) RGD PMID:17199044 MGI:3696007 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:1858004 (MGI:4421485|PMID:19850742) RGD PMID:19850742 MGI:4421485 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3777490|PMID:18347094), (MGI:3804326|PMID:18467660) RGD PMID:18347094 PMID:18467660 MGI:3777490 MGI:3804326 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
JBrowse link
G Tcl1a Tcl1 family Akt coactivator A acts_upstream_of_or_within ISO MGI:2446210 (MGI:3759699|PMID:17938240) RGD PMID:17938240 MGI:3759699 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025
JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (MGI:6323527|PMID:31128943) RGD PMID:31128943 MGI:6323527 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 involved_in ISO (MGI:6158697|PMID:29547716) RGD PMID:29547716 MGI:6158697 NCBI chr15:50,607,335...50,671,802
Ensembl chr15:50,607,380...50,671,802
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO MGI:1857856 (MGI:4430439|PMID:20040500) RGD PMID:20040500 MGI:4430439 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:3704067|PMID:17314325)
UniProt
RGD
PMID:17314325 GO_REF:0000024 MGI:3704067 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654 (MGI:86404|PMID:9056639) RGD PMID:9056639 MGI:86404 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
negative regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir145 microRNA 145 involved_in ISO (PMID:19409607) RGD PMID:19409607 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl2 lysyl oxidase-like 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6107312|PMID:25959397)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25959397 GO_REF:0000024 GO_REF:0000107 MGI:6107312 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Wnt9b Wnt family member 9B involved_in ISO (PMID:25640183) RGD PMID:25640183 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
G Zfp706 zinc finger protein 706 involved_in ISO (MGI:5640939|PMID:24412312) RGD PMID:24412312 MGI:5640939 NCBI chr 7:68,167,499...68,174,042
Ensembl chr 7:68,166,323...68,174,148
JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbh LBH regulator of WNT signaling pathway involved_in ISO (MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:5634223 NCBI chr 6:22,569,238...22,593,056
Ensembl chr 6:22,568,834...22,593,079
JBrowse link
G Tp63 tumor protein p63 involved_in ISO (MGI:5634223|PMID:25655704) RGD PMID:25655704 MGI:5634223 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen-related receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:5440110|PMID:23019124), (MGI:5468900|PMID:23040478), (MGI:5882870|PMID:23040477), (MGI:5887187|PMID:26206133)
UniProt
RGD
PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 GO_REF:0000024 MGI:5440110 MGI:5468900 MGI:5882870 MGI:5887187 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Kdm2b lysine demethylase 2B acts_upstream_of_or_within ISO (MGI:5433809|PMID:21540074) RGD PMID:21540074 MGI:5433809 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5440110|PMID:23019124)
UniProt
RGD
PMID:23019124 GO_REF:0000024 MGI:5440110 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Prdm14 PR/SET domain 14 involved_in ISO (MGI:5787734|PMID:26523391), (MGI:5788595|PMID:27281218) RGD PMID:26523391 PMID:27281218 MGI:5787734 MGI:5788595 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
ISS
(PMID:21258371)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21258371 GO_REF:0000024 GO_REF:0000107 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO MGI:106907|MGI:109241 (MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:4455217 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369
JBrowse link
G Tead3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO MGI:101876|MGI:106907 (MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:4455217 NCBI chr20:6,392,053...6,411,446
Ensembl chr20:6,392,053...6,411,446
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:101876|MGI:109241 (MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:4455217 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of_or_within ISO (MGI:4455217|PMID:20516196) RGD PMID:20516196 MGI:4455217 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Zfp322a zinc finger protein 322a involved_in ISO (MGI:6114965|PMID:24550733) RGD PMID:24550733 MGI:6114965 NCBI chr17:41,773,789...41,789,654
Ensembl chr17:41,773,782...41,790,078
JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(MGI:6323493|PMID:31005419)
UniProt
RGD
PMID:31005419 GO_REF:0000024 MGI:6323493 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1934268|MGI:2445832 (MGI:3696007|PMID:17199044)
GO_REF:0000107
RGD
Ensembl
PMID:17199044 GO_REF:0000107 MGI:3696007 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like involved_in ISO (MGI:6323493|PMID:31005419) RGD PMID:31005419 MGI:6323493 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in ISO (MGI:6323493|PMID:31005419) RGD PMID:31005419 MGI:6323493 NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655
JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1858004 (MGI:4421485|PMID:19850742)
GO_REF:0000107
RGD
Ensembl
PMID:19850742 GO_REF:0000107 MGI:4421485 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3804326|PMID:18467660) RGD PMID:18467660 MGI:3804326 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    multicellular organismal process 8865
      stem cell population maintenance 171
        regulation of stem cell population maintenance 39
          negative regulation of stem cell population maintenance + 8
          positive regulation of stem cell population maintenance + 12
          regulation of somatic stem cell population maintenance + 13
Path 2
Term Annotations click to browse term
  biological_process 18737
    biological regulation 13318
      regulation of biological process 12598
        regulation of multicellular organismal process 3130
          regulation of stem cell population maintenance 39
            negative regulation of stem cell population maintenance + 8
            positive regulation of stem cell population maintenance + 12
            regulation of somatic stem cell population maintenance + 13
paths to the root