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ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA pseudouridine synthesis
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Accession:GO:1990481 term browser browse the term
Definition:The intramolecular conversion of uridine to pseudouridine in an mRNA molecule.
Synonyms:exact_synonym: mRNA pseudouridylation


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mRNA pseudouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkc1 dyskerin pseudouridine synthase 1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118
G Pus1 pseudouridine synthase 1 involved_in ISO
IBA
IEA		 (PMID:31477916), (PMID:35051350)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:31477916 PMID:35051350 GO_REF:0000033 GO_REF:0000118 NCBI chr12:45,880,364...45,889,196
Ensembl chr12:45,880,440...45,889,196 		JBrowse link
G Pus3 pseudouridine synthase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:33,910,461...33,918,716
Ensembl chr 8:33,911,357...33,918,714 		JBrowse link
G Pus7 pseudouridine synthase 7 involved_in ISO (PMID:28073919), (PMID:31477916), (PMID:35051350) RGD PMID:28073919 PMID:31477916 PMID:35051350 NCBI chr 4:11,360,169...11,401,139
Ensembl chr 4:11,360,188...11,401,172 		JBrowse link
G Pus7l pseudouridine synthase 7 like involved_in ISO (PMID:35051350) RGD PMID:35051350 NCBI chr 7:125,659,507...125,706,582
Ensembl chr 7:125,659,507...125,682,333 		JBrowse link
G Rpusd2 RNA pseudouridine synthase domain containing 2 involved_in ISO (PMID:31477916), (PMID:35051350) RGD PMID:31477916 PMID:35051350 NCBI chr 3:106,017,759...106,023,010
Ensembl chr 3:106,017,864...106,023,251 		JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 involved_in ISO (PMID:35051350) RGD PMID:35051350 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873 		JBrowse link
G Trub1 TruB pseudouridine synthase family member 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:28073919), (PMID:31477916)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:28073919 PMID:31477916 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:256,513,418...256,554,549
Ensembl chr 1:256,515,562...256,552,814 		JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 involved_in ISO (PMID:31477916) RGD PMID:31477916 NCBI chr 3:13,049,220...13,059,836
Ensembl chr 3:13,033,745...13,059,930 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      primary metabolic process 10271
        nucleobase-containing compound metabolic process 5696
          nucleic acid metabolic process 5103
            nucleic acid catabolic process 836
              mRNA modification 21
                mRNA pseudouridine synthesis 9
Path 2
Term Annotations click to browse term
  biological_process 20292
    cellular process 18769
      cellular metabolic process 10279
        cellular nitrogen compound metabolic process 5967
          nucleobase-containing compound metabolic process 5696
            nucleic acid metabolic process 5103
              RNA metabolic process 4506
                RNA modification 162
                  pseudouridine synthesis 24
                    mRNA pseudouridine synthesis 9
paths to the root