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ONTOLOGY REPORT - ANNOTATIONS

Term:exoribonuclease complex
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Accession:GO:1905354 term browser browse the term
Definition:A protein complex which is capable of exoribonuclease activity.
Comment:An example of this is DIS3 in human (Q9Y2L1) in PMID:17174896 (inferred from direct assay).


show annotations for term's descendants           Sort by:
cytoplasmic exosome (RNase complex) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carhsp1 calcium regulated heat stable protein 1 located_in
part_of 		ISS
ISO 		GO_REF:0000024
(PMID:21078874) 		UniProt
RGD		 PMID:21078874 GO_REF:0000024 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019 		JBrowse link
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642 		JBrowse link
G Dis3l DIS3-like exosome 3'-5' exoribonuclease part_of ISO
IEA
IBA
ISS 		(PMID:20531386), (PMID:20531389)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000024 		RGD
Ensembl
GO_Central
UniProt		 PMID:20531386 PMID:20531389 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:64,803,925...64,840,306
Ensembl chr 8:64,803,927...64,840,165 		JBrowse link
G Exosc2 exosome component 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575 		JBrowse link
G Exosc3 exosome component 3 part_of ISO
IEA
IBA 		(PMID:11110791)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:11110791 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc4 exosome component 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573 		JBrowse link
G Exosc5 exosome component 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265 		JBrowse link
G Exosc6 exosome component 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Exosc7 exosome component 7 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270 		JBrowse link
G Exosc8 exosome component 8 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Exosc9 exosome component 9 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Gtpbp1 GTP binding protein 1 part_of IDA PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr 7:111,248,254...111,272,705
Ensembl chr 7:111,248,254...111,272,705 		JBrowse link
exosome (RNase complex) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease part_of IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642 		JBrowse link
G Dis3l DIS3-like exosome 3'-5' exoribonuclease part_of IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:64,803,925...64,840,306
Ensembl chr 8:64,803,927...64,840,165 		JBrowse link
G Exosc1 exosome component 1 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000002 		RGD
UniProt
Ensembl
InterPro		 PMID:20531389 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 1:240,734,777...240,745,431
Ensembl chr 1:240,734,773...240,745,438 		JBrowse link
G Exosc10 exosome component 10 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000107
GO_REF:0000043 		RGD
Ensembl
UniProt		 PMID:20531389 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Exosc2 exosome component 2 part_of ISO
IEA 		(PMID:12419256), (PMID:20531389)
GO_REF:0000002
GO_REF:0000043
GO_REF:0000107 		RGD
InterPro
UniProt
Ensembl		 PMID:12419256 PMID:20531389 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575 		JBrowse link
G Exosc3 exosome component 3 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000043
GO_REF:0000107
GO_REF:0000002 		RGD
UniProt
Ensembl
InterPro		 PMID:20531389 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc4 exosome component 4 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000107 		RGD
Ensembl		 PMID:20531389 GO_REF:0000107 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573 		JBrowse link
G Exosc5 exosome component 5 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000043 		RGD
UniProt		 PMID:20531389 GO_REF:0000043 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265 		JBrowse link
G Exosc6 exosome component 6 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000107
GO_REF:0000043 		RGD
Ensembl
UniProt		 PMID:20531389 GO_REF:0000043 GO_REF:0000107 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Exosc7 exosome component 7 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000043 		RGD
UniProt		 PMID:20531389 GO_REF:0000043 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270 		JBrowse link
G Exosc8 exosome component 8 part_of ISO
IEA 		(PMID:20531389)
GO_REF:0000107
GO_REF:0000002
GO_REF:0000043 		RGD
Ensembl
InterPro
UniProt		 PMID:20531389 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Exosc9 exosome component 9 part_of ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
GO_REF:0000043
(PMID:20531389) 		UniProt
InterPro
Ensembl
RGD		 PMID:20531389 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Mphosph6 M phase phosphoprotein 6 part_of
located_in 		ISO (PMID:20531389)
(PMID:11719186) 		RGD PMID:11719186 PMID:20531389 NCBI chr19:45,860,152...45,870,117
Ensembl chr19:45,860,154...45,870,170 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase located_in ISO
IEA 		(PMID:11719186)
GO_REF:0000107 		RGD
Ensembl		 PMID:11719186 GO_REF:0000107 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627 		JBrowse link
G Zfc3h1 zinc finger, C3H1-type containing part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:51,008,251...51,064,666
Ensembl chr 7:51,007,984...51,064,661 		JBrowse link
G Zfp36 zinc finger protein 36 part_of
NOT|located_in 		IEA
ISS
ISO 		GO_REF:0000043
GO_REF:0000024
(PMID:11719186) 		UniProt
RGD		 PMID:11719186 GO_REF:0000024 GO_REF:0000043 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
Las1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Las1l LAS1-like, ribosome biogenesis factor part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687 		JBrowse link
mitochondrial degradosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 part_of ISO
IEA 		(PMID:19509288), (PMID:29967381)
GO_REF:0000107 		RGD
Ensembl		 PMID:19509288 PMID:29967381 GO_REF:0000107 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696 		JBrowse link
G Supv3l1 Suv3 like RNA helicase part_of ISS
ISO
IEA
IBA 		GO_REF:0000024
(PMID:19509288), (PMID:29967381)
GO_REF:0000107
GO_REF:0000033 		UniProt
RGD
Ensembl
GO_Central		 PMID:19509288 PMID:29967381 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054 		JBrowse link
nuclear exosome (RNase complex) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease part_of ISO
IEA
IBA 		(PMID:20531386)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:20531386 GO_REF:0000033 GO_REF:0000107 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642 		JBrowse link
G Exosc1 exosome component 1 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:240,734,777...240,745,431
Ensembl chr 1:240,734,773...240,745,438 		JBrowse link
G Exosc10 exosome component 10 part_of ISO
IEA
IBA 		(PMID:26166824)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000002 		RGD
Ensembl
GO_Central
InterPro		 PMID:26166824 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Exosc2 exosome component 2 part_of ISO
IEA
IBA 		(PMID:26166824)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26166824 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575 		JBrowse link
G Exosc3 exosome component 3 part_of ISO
IEA
IBA 		(PMID:11110791)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:11110791 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc4 exosome component 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573 		JBrowse link
G Exosc5 exosome component 5 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265 		JBrowse link
G Exosc6 exosome component 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:39,022,171...39,023,585
Ensembl chr19:39,022,183...39,023,515 		JBrowse link
G Exosc7 exosome component 7 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270 		JBrowse link
G Exosc8 exosome component 8 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Exosc9 exosome component 9 part_of ISO
IEA
IBA 		(PMID:22791713)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:22791713 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Mphosph6 M phase phosphoprotein 6 located_in ISO (PMID:26166824) RGD PMID:26166824 NCBI chr19:45,860,152...45,870,117
Ensembl chr19:45,860,154...45,870,170 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase located_in ISO
IEA 		(PMID:26166824)
GO_REF:0000107 		RGD
Ensembl		 PMID:26166824 GO_REF:0000107 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627 		JBrowse link
G Nvl nuclear VCP-like located_in ISO (PMID:26166824) RGD PMID:26166824 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049 		JBrowse link
G Wdr74 WD repeat domain 74 located_in ISO
IEA 		(PMID:26456651)
GO_REF:0000107 		RGD
Ensembl		 PMID:26456651 GO_REF:0000107 NCBI chr 1:205,631,769...205,636,558
Ensembl chr 1:205,631,824...205,636,563 		JBrowse link
PAN complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pan2 poly(A) specific ribonuclease subunit PAN2 part_of ISO
ISS
IEA
IBA 		(PMID:14583602)
GO_REF:0000024
GO_REF:0000104
GO_REF:0000033
GO_REF:0000002
GO_REF:0000107 		RGD
UniProt
GO_Central
InterPro
Ensembl		 PMID:14583602 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744 		JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 part_of ISO
IEA
IBA 		(PMID:14583602)
GO_REF:0000002
GO_REF:0000104
GO_REF:0000033 		RGD
InterPro
UniProt
GO_Central		 PMID:14583602 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21350
    protein-containing complex 6834
      catalytic complex 1961
        exoribonuclease complex 25
          Las1 complex 1
          PAN complex 2
          RNA polymerase II termination complex 0
          exosome (RNase complex) + 20
          mitochondrial degradosome 2
paths to the root