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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of phospholipid metabolic process
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Accession:GO:1903725 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of phospholipid metabolic process.
Synonyms:exact_synonym: regulation of phospholipid metabolism



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regulation of phospholipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARF1 ADP ribosylation factor 1 ISO RGD PMID:10657240 RGD:9684853 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
G GNB3 G protein subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,971,854...6,979,214
Ensembl chr12:6,883,280...6,890,692
JBrowse link
negative regulation of phosphatidate phosphatase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPIN1 lipin 1 ISO RGD PMID:21715287 RGD:38599010 NCBI chr2A:11,664,727...11,815,497
Ensembl chr2A:11,857,961...11,961,551
JBrowse link
negative regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPCAT1 lysophosphatidylcholine acyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4460850|PMID:20018880) MGI
Ensembl
PMID:20018880 GO_REF:0000107 MGI:4460850 NCBI chr 5:1,759,243...1,824,102
Ensembl chr 5:1,503,853...1,544,741
JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 involved_in ISO (PMID:2302419) BHF-UCL PMID:2302419 NCBI chr19:41,862,168...41,878,231 JBrowse link
negative regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDGFA platelet derived growth factor subunit A involved_in ISO (PMID:2538439) BHF-UCL PMID:2538439 NCBI chr 7:648,722...672,023 JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
negative regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,067,633...108,089,742
Ensembl chr 9:137,036,696...137,057,776
JBrowse link
G SLC27A1 solute carrier family 27 member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:16,956,000...16,993,429
Ensembl chr19:17,929,785...17,966,171
JBrowse link
positive regulation of cardiolipin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STOML2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,950,387...34,953,707
Ensembl chr 9:35,755,790...35,759,091
JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046
JBrowse link
positive regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
positive regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:110,100,210...110,181,277
Ensembl chr2B:228,706,142...228,759,882
JBrowse link
G CAPN2 calpain 2 ISO RGD PMID:9481489 RGD:13792658 NCBI chr 1:199,335,582...199,399,267
Ensembl chr 1:204,335,573...204,409,150
JBrowse link
G RAB38 RAB38, member RAS oncogene family ISO RGD PMID:28438206 RGD:13524861 NCBI chr11:83,121,858...83,183,698
Ensembl chr11:86,710,358...86,773,142
JBrowse link
positive regulation of phosphatidylinositol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HTR2A 5-hydroxytryptamine receptor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826
JBrowse link
G HTR2B 5-hydroxytryptamine receptor 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:118,362,719...118,381,253
Ensembl chr2B:237,153,709...237,170,591
JBrowse link
G HTR2C 5-hydroxytryptamine receptor 2C involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:103,673,172...103,999,133
Ensembl chr  X:114,199,485...114,503,201
JBrowse link
positive regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRF5 adhesion G protein-coupled receptor F5 acts_upstream_of_or_within ISO (MGI:5641462|PMID:23590306) MGI PMID:23590306 MGI:5641462 NCBI chr 6:46,438,128...46,540,325
Ensembl chr 6:47,700,570...47,772,510
JBrowse link
G CHP1 calcineurin like EF-hand protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:20,172,874...20,223,382
Ensembl chr15:38,418,815...38,467,681
JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 ISO RGD PMID:19191103 RGD:126790485 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006
JBrowse link
G PC pyruvate carboxylase involved_in ISO PMID:23357280 CACAO PMID:23357280 RGD:10047307 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
positive regulation of phospholipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC2 apolipoprotein C2 involved_in ISO (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:41,892,954...41,896,461 JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chr17:73,811,249...73,822,719
Ensembl chr17:79,347,505...79,359,349
JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910
JBrowse link
regulation of cardiolipin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100974096 mitochondrial import inner membrane translocase subunit TIM14 involved_in ISO (MGI:5604945|PMID:24856930) UniProt PMID:24856930 MGI:5604945 NCBI chr 3:178,019,161...178,025,272
Ensembl chr 3:186,191,128...186,195,666
JBrowse link
G PHB2 prohibitin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,097,073...7,102,474
Ensembl chr12:7,013,195...7,018,053
JBrowse link
regulation of phosphatidic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (MGI:5904930|PMID:27806294) MGI PMID:27806294 MGI:5904930 NCBI chr11:58,046,842...58,064,219
Ensembl chr11:61,399,314...61,416,494
JBrowse link
regulation of phosphatidylcholine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FABP3 fatty acid binding protein 3 acts_upstream_of_or_within ISO (MGI:3045488|PMID:15164767) MGI PMID:15164767 MGI:3045488 NCBI chr 1:30,640,595...30,653,450
Ensembl chr 1:31,665,270...31,673,689
JBrowse link
regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791
JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:122,293,803...122,455,314
Ensembl chr12:126,659,532...126,694,767
JBrowse link
regulation of phosphatidylcholine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA3 ATP binding cassette subfamily A member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:1,132,435...1,196,226
Ensembl chr16:2,376,006...2,437,427
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A acts_upstream_of
involved_in
ISO
IEA
(PMID:26005868)
(MGI:6196220|PMID:30074985)
ARUK-UCL
Ensembl
PMID:26005868 PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
regulation of phosphatidylethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFSD2A major facilitator superfamily domain containing 2A acts_upstream_of
involved_in
ISO
IEA
(MGI:6196220|PMID:30074985) ARUK-UCL
Ensembl
PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
regulation of phosphatidylinositol dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHRM5 cholinergic receptor muscarinic 5 ISO RGD PMID:2540186 RGD:724743 NCBI chr15:12,478,656...12,575,512
Ensembl chr15:31,406,198...31,407,796
JBrowse link
G MTMR1 myotubularin related protein 1 involved_in ISO (PMID:16787938) UniProt PMID:16787938 NCBI chr  X:140,343,740...140,415,134
Ensembl chr  X:150,279,183...150,346,900
JBrowse link
G MTMR2 myotubularin related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:90,839,577...90,929,731
Ensembl chr11:94,367,038...94,457,138
JBrowse link
G MTMR3 myotubularin related protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,925,275...11,072,554
Ensembl chr22:28,818,273...28,872,982
JBrowse link
G MTMR4 myotubularin related protein 4 involved_in ISO (PMID:16787938) UniProt PMID:16787938 NCBI chr17:52,564,455...52,592,899
Ensembl chr17:57,418,229...57,446,545
JBrowse link
G MTMR9 myotubularin related protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:7,864,461...7,918,324 JBrowse link
regulation of phosphatidylserine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFSD2A major facilitator superfamily domain containing 2A acts_upstream_of
involved_in
ISO
IEA
(MGI:6196220|PMID:30074985) ARUK-UCL
Ensembl
PMID:30074985 GO_REF:0000107 MGI:6196220 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
regulation of phospholipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (MGI:5605608|PMID:25218477) MGI PMID:25218477 MGI:5605608 NCBI chr2B:95,475,320...95,494,286
Ensembl chr2B:213,599,036...213,617,175
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO (MGI:6467919|PMID:11003606) UniProt PMID:11003606 MGI:6467919 NCBI chr 1:52,195,491...52,324,227
Ensembl chr 1:53,797,254...53,924,939
JBrowse link
regulation of phospholipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 acts_upstream_of_or_within ISO (MGI:5605608|PMID:25218477) MGI PMID:25218477 MGI:5605608 NCBI chr2B:95,475,320...95,494,286
Ensembl chr2B:213,599,036...213,617,175
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15229
    metabolic process 9937
      primary metabolic process 8863
        regulation of primary metabolic process 5122
          regulation of lipid metabolic process 359
            regulation of phospholipid metabolic process 41
              negative regulation of phospholipid metabolic process + 7
              positive regulation of phospholipid metabolic process + 16
              regulation of cardiolipin metabolic process + 4
              regulation of phosphatidylcholine metabolic process + 10
              regulation of phosphatidylethanolamine metabolic process + 1
              regulation of phosphatidylinositol dephosphorylation 6
              regulation of phosphatidylserine metabolic process + 1
              regulation of phospholipid biosynthetic process + 21
              regulation of phospholipid catabolic process + 7
Path 2
Term Annotations click to browse term
  biological_process 15229
    biological regulation 10799
      regulation of biological process 10214
        regulation of metabolic process 5963
          regulation of cellular metabolic process 5292
            regulation of phosphorus metabolic process 1324
              regulation of phosphate metabolic process 1322
                regulation of phospholipid metabolic process 41
                  negative regulation of phospholipid metabolic process + 7
                  positive regulation of phospholipid metabolic process + 16
                  regulation of cardiolipin metabolic process + 4
                  regulation of phosphatidylcholine metabolic process + 10
                  regulation of phosphatidylethanolamine metabolic process + 1
                  regulation of phosphatidylinositol dephosphorylation 6
                  regulation of phosphatidylserine metabolic process + 1
                  regulation of phospholipid biosynthetic process + 21
                  regulation of phospholipid catabolic process + 7
paths to the root