Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum to cytosol transport
go back to main search page
Accession:GO:1903513 term browser browse the term
Definition:The directed movement of substances from endoplasmic reticulum to cytosol.
Synonyms:exact_synonym: ER to cytosol transport



show annotations for term's descendants           Sort by:
 
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 3:141,145,769...141,184,703
Ensembl chr 3:141,145,782...141,184,703
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) RGD PMID:22795130 MGI:5437551 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689
JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr10:55,727,764...55,739,462
Ensembl chr10:55,727,643...55,739,518
JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:12,754,490...12,768,454
Ensembl chr20:12,763,543...12,767,027
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr14:104,655,745...104,693,508
Ensembl chr14:104,655,673...104,693,480
JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 7:62,915,498...62,957,591
Ensembl chr 7:62,915,515...62,943,745
JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO
PMID:21873635
(PMID:25660456)
RGD PMID:25660456 PMID:21873635 RGD:13792537 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr15:98,960,139...99,107,795
Ensembl chr15:98,960,139...99,107,787
JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:10,983,734...11,005,468
Ensembl chr20:10,983,742...11,005,447
JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 5:47,422,513...47,441,476
Ensembl chr 5:47,422,587...47,441,461
JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO (PMID:24068323) RGD PMID:24068323 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205
JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO UniProtKB:Q9BV94 (PMID:24200403)
(MGI:5563002|PMID:24200403)
RGD PMID:24200403 MGI:5563002 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO UniProtKB:Q92611 (PMID:24200403)
(MGI:5563002|PMID:24200403)
RGD PMID:24200403 MGI:5563002 NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485
JBrowse link
retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
JBrowse link
G Derl1 derlin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15215856), (PMID:25660456)
(PMID:15215855)
RGD PMID:15215855 PMID:15215856 PMID:25660456 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145
JBrowse link
G Derl2 derlin 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16449189)
MGI:4947129 (MGI:4947015|PMID:21220515)
RGD PMID:16449189 PMID:21220515 MGI:4947015 NCBI chr10:55,727,764...55,739,462
Ensembl chr10:55,727,643...55,739,518
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:25660456)
Ensembl
RGD
PMID:25660456 GO_REF:0000107 NCBI chr17:9,947,216...9,989,474
Ensembl chr17:9,947,220...9,989,485
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr19:10,598,411...10,609,002
Ensembl chr19:10,598,417...10,618,424
JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in ISO
IEA
(PMID:25660456)
GO_REF:0000107
RGD
Ensembl
PMID:25660456 GO_REF:0000107 NCBI chr 7:21,110,431...21,124,762
Ensembl chr 7:21,110,457...21,124,788
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25660456)
ParkinsonsUK-UCL
Ensembl
RGD
PMID:25660456 GO_REF:0000024 GO_REF:0000107 NCBI chr10:105,654,395...105,709,958
Ensembl chr10:105,654,812...105,709,913
JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:62,915,498...62,957,591
Ensembl chr 7:62,915,515...62,943,745
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in ISO (PMID:17215517) RGD PMID:17215517 NCBI chr 5:61,773,594...61,781,804
Ensembl chr 5:61,773,594...61,781,804
JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in IEA
ISO
GO_REF:0000107
(PMID:25660456)
Ensembl
RGD
PMID:25660456 GO_REF:0000107 NCBI chr 6:110,735,450...110,779,695
Ensembl chr 6:110,735,450...110,779,648
JBrowse link
G Selenos selenoprotein S involved_in ISO
IEA
IBA
(PMID:15215856)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15215856 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:119,659,779...119,669,546
Ensembl chr 1:119,659,751...119,669,833
JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in ISO (PMID:24807418) RGD PMID:24807418 NCBI chr14:77,065,391...77,070,871
Ensembl chr14:77,065,841...77,070,865
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087
JBrowse link
G Vcp valosin-containing protein involved_in IBA
ISO
PMID:21873635
(MGI:5634892|PMID:12847084)
(PMID:15215856), (PMID:25660456)
RGD PMID:12847084 PMID:15215856 PMID:25660456 PMID:21873635 MGI:5634892, RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19390
    localization 6437
      cellular localization 2962
        intracellular transport 1515
          endoplasmic reticulum to cytosol transport 27
            retrograde protein transport, ER to cytosol + 27
Path 2
Term Annotations click to browse term
  biological_process 19390
    cellular process 18252
      cellular localization 2962
        establishment of localization in cell 2181
          intracellular transport 1515
            endoplasmic reticulum to cytosol transport 27
              retrograde protein transport, ER to cytosol + 27
paths to the root