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ONTOLOGY REPORT - ANNOTATIONS


Term:mucopolysaccharide metabolic process
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Accession:GO:1903510 term browser browse the term
Definition:The chemical reactions and pathways involving mucopolysaccharide.
Synonyms:exact_synonym: mucopolysaccharide metabolism


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chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt3 beta-1,4-N-acetyl-galactosaminyltransferase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936606:716,697...751,392
Ensembl chrNW_004936606:645,673...749,370
JBrowse link
G B4galnt4 beta-1,4-N-acetyl-galactosaminyltransferase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936888:248,187...266,680
Ensembl chrNW_004936888:248,187...270,027
JBrowse link
G Chpf chondroitin polymerizing factor involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22952873)
(PMID:22952769)
Ensembl
MGI
TreeGrafter
UniProt
PMID:22952769 PMID:22952873 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936569:1,918,999...1,923,735
Ensembl chrNW_004936569:1,918,961...1,923,724
JBrowse link
G Chpf2 chondroitin polymerizing factor 2 involved_in IEA UniProt
TreeGrafter
GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936527:6,637,563...6,643,051
Ensembl chrNW_004936527:6,637,480...6,646,985
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21138417)
(PMID:10722746)
Ensembl
MGI
PMID:10722746 PMID:21138417 GO_REF:0000107 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:187,920...210,818
Ensembl chrNW_004936823:187,957...209,176
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:9597547)
(PMID:11696535)
RGD
MGI
TreeGrafter
Ensembl
PMID:9597547 PMID:11696535 PMID:16495484 GO_REF:0000107 GO_REF:0000118 RGD:1600854 NCBI chrNW_004936521:6,864,456...6,900,122
Ensembl chrNW_004936521:6,863,642...6,900,041
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936502:12,426,821...12,446,127
Ensembl chrNW_004936502:12,426,851...12,445,741
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11514575)
(PMID:22952769)
MGI
TreeGrafter
UniProt
Ensembl
PMID:11514575 PMID:22952769 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936483:2,613,820...2,685,986
Ensembl chrNW_004936483:2,613,820...2,686,276
JBrowse link
G Chsy3 chondroitin sulfate synthase 3 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936504:2,948,878...2,952,518
Ensembl chrNW_004936504:2,949,014...3,200,006
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936555:3,639,459...3,807,483
Ensembl chrNW_004936555:3,637,630...3,807,488
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936617:2,990,040...3,028,392
Ensembl chrNW_004936617:2,990,031...3,029,515
JBrowse link
G Slc35b2 solute carrier family 35 member B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,826,882...15,830,321
Ensembl chrNW_004936476:15,826,822...15,834,729
JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (PMID:17952091) MGI PMID:17952091 NCBI chrNW_004936591:4,519,136...4,574,925
Ensembl chrNW_004936591:4,531,403...4,570,631
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:7,090,241...7,118,315
Ensembl chrNW_004936482:7,089,621...7,118,284
JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936501:4,164,714...4,337,604
Ensembl chrNW_004936501:4,187,213...4,331,783
JBrowse link
G Xylt2 xylosyltransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936490:11,327,654...11,340,417
Ensembl chrNW_004936490:11,326,859...11,340,453
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897
JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Hyal4 hyaluronidase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23086929) Ensembl
MGI
PMID:23086929 GO_REF:0000107 NCBI chrNW_004936605:1,645,204...1,666,510
Ensembl chrNW_004936605:1,645,204...1,666,510
JBrowse link
chondroitin sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18539921)
(PMID:18695242)
Ensembl
MGI
PMID:18539921 PMID:18695242 GO_REF:0000107 NCBI chrNW_004936496:3,498,534...3,521,939
Ensembl chrNW_004936496:3,500,303...3,521,673
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16079159) Ensembl
MGI
PMID:16079159 GO_REF:0000107 NCBI chrNW_004936492:9,886,269...10,092,725
Ensembl chrNW_004936492:9,886,254...10,092,221
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21148564)
(PMID:20812917)
Ensembl
MGI
PMID:20812917 PMID:21148564 GO_REF:0000107 NCBI chrNW_004936555:3,639,459...3,807,483
Ensembl chrNW_004936555:3,637,630...3,807,488
JBrowse link
G Dse dermatan sulfate epimerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936824:957,783...995,465
Ensembl chrNW_004936824:957,848...995,260
JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:32201365) Ensembl
MGI
PMID:32201365 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:187,920...210,818
Ensembl chrNW_004936823:187,957...209,176
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11470797) MGI
Ensembl
PMID:11470797 GO_REF:0000107 NCBI chrNW_004936471:3,930,167...3,932,356
Ensembl chrNW_004936471:3,930,388...3,931,518
JBrowse link
G Dse dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936824:957,783...995,465
Ensembl chrNW_004936824:957,848...995,260
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chrNW_004936549:6,654,259...6,827,647
Ensembl chrNW_004936549:6,653,978...6,826,349
JBrowse link
G Hexa hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245
JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691
JBrowse link
G Ids iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:62,966...88,844
Ensembl chrNW_004936513:62,993...88,774
JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19751987)
(PMID:19834056)
Ensembl
MGI
PMID:19751987 PMID:19834056 GO_REF:0000107 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077
JBrowse link
dermatan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936824:957,783...995,465
Ensembl chrNW_004936824:957,848...995,260
JBrowse link
heparin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:37,105,469...37,328,183
Ensembl chrNW_004936470:37,105,466...37,328,190
JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:21148566)
(PMID:21310272)
(PMID:10926768), (PMID:15161920), (PMID:15177029), (PMID:18480751)
Ensembl
MGI
PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21310272) Ensembl
MGI
PMID:21310272 GO_REF:0000107 NCBI chrNW_004936562:4,345,146...4,489,180
Ensembl chrNW_004936562:4,342,874...4,489,180
JBrowse link
G Glce glucuronic acid epimerase involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:28,984,777...29,035,878
Ensembl chrNW_004936471:28,985,406...29,035,870
JBrowse link
G LOC101971473 N-deacetylase and N-sulfotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936932:259,847...414,472
Ensembl chrNW_004936932:259,542...417,915
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936504:4,413,549...4,495,933
Ensembl chrNW_004936504:4,413,549...4,454,109
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936521:5,336,658...5,346,704
Ensembl chrNW_004936521:5,336,631...5,346,824
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936563:5,434,668...5,664,080
Ensembl chrNW_004936563:5,430,444...5,664,126
JBrowse link
G Slc10a7 solute carrier family 10 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:2,792,576...3,038,504
Ensembl chrNW_004936535:2,792,293...3,038,512
JBrowse link
G Xylt2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17517600) Ensembl
MGI
PMID:17517600 GO_REF:0000107 NCBI chrNW_004936490:11,327,654...11,340,417
Ensembl chrNW_004936490:11,326,859...11,340,453
JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21873421)
(PMID:19834056)
(PMID:19751987)
MGI
Ensembl
PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077
JBrowse link
heparin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednra endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Ednrb endothelin receptor type B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:3,446,864...3,478,434
Ensembl chrNW_004936511:3,446,839...3,478,434
JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26491162), (PMID:32201365) Ensembl
MGI
PMID:26491162 PMID:32201365 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118
JBrowse link
G Hpse heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,308,350...1,341,421
Ensembl chrNW_004936738:1,308,345...1,343,145
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:11457822) Ensembl
MGI
PMID:11457822 GO_REF:0000107 NCBI chrNW_004936732:1,773,043...1,947,081
Ensembl chrNW_004936732:1,773,028...1,946,696
JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12111813), (PMID:25267636), (PMID:29624734) Ensembl
MGI
PMID:12111813 PMID:25267636 PMID:29624734 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521
JBrowse link
hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc5 ATP binding cassette subfamily C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,838,044...5,916,287
Ensembl chrNW_004936578:5,837,993...5,916,274
JBrowse link
G Ccnd3 cyclin D3 ISO RGD PMID:19276076 RGD:2316018 NCBI chrNW_004936476:17,799,754...17,886,835
Ensembl chrNW_004936476:17,879,869...17,886,827
JBrowse link
G Has1 hyaluronan synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:10617644) Ensembl
MGI
TreeGrafter
PMID:10617644 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004937026:125,622...132,141
Ensembl chrNW_004937026:125,881...135,235
JBrowse link
G Has2 hyaluronan synthase 2 involved_in IEA UniProt
TreeGrafter
Ensembl
GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:25,418,069...25,443,332
Ensembl chrNW_004936470:25,418,063...25,444,634
JBrowse link
G Has3 hyaluronan synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9060470) Ensembl
MGI
TreeGrafter
PMID:9060470 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:19,270,788...19,282,922
Ensembl chrNW_004936475:19,270,830...19,282,907
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097
JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:17170110)
(PMID:26528478)
UniProt
MGI
PMID:17170110 PMID:26528478 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:19,721,256...19,799,371
Ensembl chrNW_004936483:19,724,605...19,799,361
JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:7,750,353...7,826,408
Ensembl chrNW_004936503:7,750,352...7,825,554
JBrowse link
G Gusb glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897
JBrowse link
G Hexa hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245
JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691
JBrowse link
G Hmmr hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:570,112...599,400
Ensembl chrNW_004936515:571,139...600,132
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,845,445...1,851,106
Ensembl chrNW_004936529:1,845,763...1,851,252
JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,831,639...1,837,314
Ensembl chrNW_004936529:1,831,254...1,837,314
JBrowse link
G Hyal4 hyaluronidase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,645,204...1,666,510
Ensembl chrNW_004936605:1,645,204...1,666,510
JBrowse link
G LOC101976844 hyaluronidase-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,670,237...1,679,080 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,788,560...7,802,821
Ensembl chrNW_004936528:7,788,352...7,802,902
JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,595,969...1,602,236
Ensembl chrNW_004936605:1,595,481...1,602,236
JBrowse link
G Stab2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
hyaluronan metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cemip cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:19,721,256...19,799,371
Ensembl chrNW_004936483:19,724,605...19,799,361
JBrowse link
G Has2 hyaluronan synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21246657) Ensembl
MGI
PMID:21246657 GO_REF:0000107 NCBI chrNW_004936470:25,418,069...25,443,332
Ensembl chrNW_004936470:25,418,063...25,444,634
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Il15 interleukin 15 ISO RGD PMID:17667861 RGD:5013835 NCBI chrNW_004936535:6,344,348...6,358,803
Ensembl chrNW_004936535:6,344,395...6,350,197
JBrowse link
G Itih1 inter-alpha-trypsin inhibitor heavy chain 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:3,534,071...3,548,554
Ensembl chrNW_004936473:3,533,819...3,548,411
JBrowse link
G Itih2 inter-alpha-trypsin inhibitor heavy chain 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936484:7,064,836...7,101,872
Ensembl chrNW_004936484:7,065,406...7,101,855
JBrowse link
G Itih3 inter-alpha-trypsin inhibitor heavy chain 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:3,553,210...3,568,636
Ensembl chrNW_004936473:3,553,210...3,568,636
JBrowse link
G Itih4 inter-alpha-trypsin inhibitor heavy chain 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936473:3,573,282...3,589,345
Ensembl chrNW_004936473:3,573,384...3,589,345
JBrowse link
G Itih5 inter-alpha-trypsin inhibitor heavy chain 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936484:7,123,022...7,207,166
Ensembl chrNW_004936484:7,122,921...7,203,002
JBrowse link
G Itih6 inter-alpha-trypsin inhibitor heavy chain family member 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936751:1,601,650...1,630,115
Ensembl chrNW_004936751:1,601,650...1,630,115
JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:26,129,339...26,145,464
Ensembl chrNW_004936469:26,129,331...26,145,422
JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:5,495,815...5,508,400
Ensembl chrNW_004936525:5,496,465...5,505,278
JBrowse link
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:6,215,221...6,241,828
Ensembl chrNW_004936536:6,215,152...6,241,877
JBrowse link
G Chst1 carbohydrate sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:3,318,821...3,324,460
Ensembl chrNW_004936562:3,320,957...3,324,454
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:22,227,702...22,229,022
Ensembl chrNW_004936475:22,227,835...22,229,022
JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chrNW_004936545:2,974,627...3,010,586
Ensembl chrNW_004936545:2,971,870...3,010,566
JBrowse link
keratan sulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst1 carbohydrate sulfotransferase 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936562:3,318,821...3,324,460
Ensembl chrNW_004936562:3,320,957...3,324,454
JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,562,800...3,596,983
Ensembl chrNW_004936664:3,562,798...3,599,791
JBrowse link
G Cltc clathrin heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:3,659,682...3,726,222
Ensembl chrNW_004936490:3,657,242...3,726,274
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22383528) Ensembl
MGI
PMID:22383528 GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS
IEA
AgBase
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
positive regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor involved_in ISO (PMID:17324121) UniProt PMID:17324121 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Has2 hyaluronan synthase 2 ISO RGD PMID:12186949 PMID:17080198 RGD:9588629 RGD:9588632 NCBI chrNW_004936470:25,418,069...25,443,332
Ensembl chrNW_004936470:25,418,063...25,444,634
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
JBrowse link
G Ptger4 prostaglandin E receptor 4 ISO RGD PMID:17080198 RGD:9588632 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746
JBrowse link
regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22383528) Ensembl
MGI
PMID:22383528 GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    metabolic process 9527
      organic substance metabolic process 9091
        macromolecule metabolic process 7563
          aminoglycan metabolic process 109
            glycosaminoglycan metabolic process 99
              mucopolysaccharide metabolic process 80
                chondroitin sulfate metabolic process + 24
                dermatan sulfate metabolic process + 8
                heparin metabolic process + 16
                hyaluronan metabolic process + 38
                keratan sulfate metabolic process + 5
paths to the root