Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:liposaccharide metabolic process
go back to main search page
Accession:GO:1903509 term browser browse the term
Definition:The chemical reactions and pathways involving liposaccharide.
Synonyms:exact_synonym: liposaccharide metabolism


show annotations for term's descendants           Sort by:
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPAA1 glycosylphosphatidylinositol anchor attachment 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:614,596...618,274
Ensembl chr 4:614,601...618,241 		JBrowse link
G PIGK phosphatidylinositol glycan anchor biosynthesis class K involved_in IBA
IEA		 (PMID:21873635) GO_Central
InterPro		 PMID:21873635 GO_REF:0000002 NCBI chr 6:136,057,996...136,175,236
Ensembl chr 6:136,057,985...136,180,637 		JBrowse link
G PIGS phosphatidylinositol glycan anchor biosynthesis class S involved_in IEA
IBA		 (PMID:21873635) InterPro
Ensembl
GO_Central		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr12:44,808,326...44,821,428
Ensembl chr12:44,808,339...44,822,245 		JBrowse link
G PIGT phosphatidylinositol glycan anchor biosynthesis class T involved_in IEA
IBA		 (PMID:21873635) InterPro
GO_Central
Ensembl		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr17:47,735,339...47,750,052
Ensembl chr17:47,735,088...47,750,195 		JBrowse link
G PIGU phosphatidylinositol glycan anchor biosynthesis class U involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central
InterPro		 PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr17:37,959,703...38,081,110
Ensembl chr17:37,942,707...38,081,392 		JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNLIPRP2 pancreatic lipase related protein 2 involved_in ISO (PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229) RGD
UniProt		 PMID:8765145 PMID:15287741 PMID:17401110 PMID:18702514 PMID:20083229 RGD:2303162 NCBI chr14:126,817,647...126,839,273
Ensembl chr14:126,817,642...126,839,259 		JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT1 beta-1,3-galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:73,772,833...74,340,060
Ensembl chr15:74,335,112...74,339,380 		JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:613,464...623,587
Ensembl chr10:613,608...624,131 		JBrowse link
G B4GALT3 beta-1,4-galactosyltransferase 3 involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 4:89,278,256...89,284,407
Ensembl chr 4:89,278,439...89,284,400 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G GAL3ST1 galactose-3-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (MGI:1355015|PMID:10727929)
(PMID:21873635)		 MGI
GO_Central
Ensembl		 PMID:10727929 PMID:21873635 GO_REF:0000107 MGI:1355015 NCBI chr14:47,455,089...47,476,459
Ensembl chr14:47,457,787...47,476,455 		JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in ISO PMID:8713090 UniProt PMID:8713090 RGD:39458006 NCBI chr 8:108,233,134...108,315,284
Ensembl chr 8:108,233,143...108,314,921 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALC galactosylceramidase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:2183819|PMID:11371512)
(PMID:21873635)		 MGI
Ensembl
GO_Central
InterPro		 PMID:11371512 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:2183819 NCBI chr 7:109,894,576...109,961,407
Ensembl chr 7:109,894,578...109,961,413 		JBrowse link
G GBA3 glucosylceramidase beta 3 involved_in ISO (PMID:17595169) UniProt PMID:17595169 NCBI chr 8:16,897,275...17,012,886
Ensembl chr 8:16,897,288...17,044,570 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:2183819|PMID:11371512) MGI PMID:11371512 MGI:2183819 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763 		JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAL3ST1 galactose-3-O-sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,455,089...47,476,459
Ensembl chr14:47,457,787...47,476,455 		JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:29,643,049...29,644,847
Ensembl chr 7:29,643,182...29,648,604 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (MGI:1331265|PMID:10021458)
(PMID:21873635)		 MGI
GO_Central
Ensembl		 PMID:10021458 PMID:21873635 GO_REF:0000107 MGI:1331265 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:136,633,410...137,201,213
Ensembl chr 6:136,633,441...137,201,252 		JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:268,391,851...268,402,449
Ensembl chr 1:268,391,855...268,402,407 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within ISO (MGI:1354410|PMID:10702226) MGI PMID:10702226 MGI:1354410 NCBI chr 1:268,371,569...268,383,559 JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:86,450,302...86,514,232
Ensembl chr 7:86,446,149...86,514,393 		JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:106,683,536...106,701,165
Ensembl chr 1:106,683,562...106,696,300 		JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:106,754,831...106,845,806
Ensembl chr 2:106,754,701...106,845,830 		JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:43,601,677...43,755,154
Ensembl chr10:43,602,908...43,755,277 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,813...51,334,020 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 4:7,814,492...7,911,053
Ensembl chr 4:7,896,554...7,909,505 		JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 6:13,402,336...13,456,495
Ensembl chr 6:13,402,345...13,419,378 		JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:167,363,348...167,596,892
Ensembl chr 6:167,363,347...167,595,835 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GM2A ganglioside GM2 activator acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (MGI:894862|PMID:9223328)
(PMID:21873635)		 MGI
GO_Central
InterPro
Ensembl		 PMID:9223328 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:894862 NCBI chr16:71,742,090...71,767,872
Ensembl chr16:71,742,090...71,754,884 		JBrowse link
G HEXA hexosaminidase subunit alpha acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:69059|PMID:7937929), (MGI:894862|PMID:9223328)
(PMID:21873635)
(MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)		 MGI
Ensembl
GO_Central		 PMID:7937929 PMID:8789434 PMID:9223328 PMID:9645704 PMID:21873635 GO_REF:0000107 MGI:1271008 MGI:69059 MGI:78473 MGI:894862 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339 		JBrowse link
G HEXB hexosaminidase subunit beta acts_upstream_of_or_within
involved_in		 ISO
ISS
IEA
IBA		 (MGI:1331265|PMID:10021458), (MGI:2670850|PMID:12756243), (MGI:3041658|PMID:12657883), (MGI:3573807|PMID:15748167), (MGI:894862|PMID:9223328)
(PMID:21873635)
(MGI:1271008|PMID:9645704), (MGI:78473|PMID:8789434)
(MGI:76816|PMID:8566348)		 MGI
UniProt
Ensembl
GO_Central		 PMID:8566348 PMID:8789434 PMID:9223328 PMID:9645704 PMID:10021458 More... GO_REF:0000024 GO_REF:0000107 MGI:1271008 MGI:1331265 MGI:2670850 MGI:3041658 MGI:3573807 MGI:76816 MGI:78473 MGI:894862 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759 		JBrowse link
G NEU1 neuraminidase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:23,953,721...23,958,659
Ensembl chr 7:23,947,061...23,958,666 		JBrowse link
G NEU2 neuraminidase 2 involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr15:133,392,559...133,479,406
Ensembl chr15:133,468,293...133,477,110 		JBrowse link
G NEU3 neuraminidase 3 involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 9:9,315,263...9,333,878
Ensembl chr 9:9,315,334...9,334,918 		JBrowse link
G NEU4 neuraminidase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:140,324,087...140,332,226
Ensembl chr15:140,325,135...140,328,276 		JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISO (MGI:3718765|PMID:17488728) UniProt PMID:17488728 MGI:3718765
G CLN6 CLN6 transmembrane ER protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:166,107,895...166,126,054
Ensembl chr 1:166,107,228...166,126,808 		JBrowse link
G GM2A ganglioside GM2 activator ISO RGD PMID:9770472 RGD:1598995 NCBI chr16:71,742,090...71,767,872
Ensembl chr16:71,742,090...71,754,884 		JBrowse link
G ITGB8 integrin subunit beta 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3607039|PMID:16251442) MGI
Ensembl		 PMID:16251442 GO_REF:0000107 MGI:3607039 NCBI chr 9:89,342,245...89,450,701
Ensembl chr 9:89,341,162...89,448,665 		JBrowse link
G NAGLU N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:20,271,351...20,279,777 JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4GALT alpha 1,4-galactosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5445364|PMID:22875802)
(MGI:3623723|PMID:16476743)		 MGI
Ensembl		 PMID:16476743 PMID:22875802 GO_REF:0000107 MGI:3623723 MGI:5445364 NCBI chr 5:6,083,793...6,105,921
Ensembl chr 5:6,083,444...6,105,924 		JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,402,336...13,456,495
Ensembl chr 6:13,402,345...13,419,378 		JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 involved_in ISO (PMID:8855242) UniProt PMID:8855242 NCBI chr 1:272,827,930...272,836,460
Ensembl chr 1:272,827,934...272,836,449 		JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 1:252,651,850...252,690,817
Ensembl chr 1:252,651,879...252,688,550 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 involved_in IEA
IBA
ISS		 (PMID:21873635) Ensembl
GO_Central
UniProt		 PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:236,456,238...236,467,887
Ensembl chr 1:236,455,240...236,468,210 		JBrowse link
G GBA3 glucosylceramidase beta 3 involved_in
NOT|involved_in		 ISO (PMID:17595169)
(PMID:20728381)
(PMID:26724485)		 UniProt PMID:17595169 PMID:20728381 PMID:26724485 NCBI chr 8:16,897,275...17,012,886
Ensembl chr 8:16,897,288...17,044,570 		JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3762988|PMID:17954912), (MGI:3795074|PMID:18346921) MGI
Ensembl		 PMID:17954912 PMID:18346921 GO_REF:0000107 MGI:3762988 MGI:3795074 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,134...94,609,745 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:3711591|PMID:17353235) MGI PMID:17353235 MGI:3711591 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763 		JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G D2HGDH D-2-hydroxyglutarate dehydrogenase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:140,282,059...140,301,894
Ensembl chr15:140,282,068...140,301,891 		JBrowse link
G D2HGDH D-2-hydroxyglutarate dehydrogenase involved_in IEA InterPro GO_REF:0000002 NCBI chr15:140,308,612...140,322,624
Ensembl chr15:140,308,433...140,322,618 		JBrowse link
G GAL3ST1 galactose-3-O-sulfotransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:47,455,089...47,476,459
Ensembl chr14:47,457,787...47,476,455 		JBrowse link
G GAL3ST3 galactose-3-O-sulfotransferase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:6,297,797...6,306,200
Ensembl chr 2:6,297,855...6,306,198 		JBrowse link
G GAL3ST4 galactose-3-O-sulfotransferase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:8,162,909...8,168,810
Ensembl chr 3:8,162,912...8,168,637 		JBrowse link
G SCCPDH saccharopine dehydrogenase (putative) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:15,205,644...15,264,416
Ensembl chr10:15,205,648...15,264,489 		JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:13,402,336...13,456,495
Ensembl chr 6:13,402,345...13,419,378 		JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr 9:53,442,795...53,491,847
Ensembl chr 9:53,445,591...53,486,010 		JBrowse link
G ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:160,158,238...160,225,355
Ensembl chr13:160,158,259...160,224,819 		JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:2182536|PMID:11980897) MGI
Ensembl		 PMID:11980897 GO_REF:0000107 MGI:2182536 NCBI chr10:43,601,677...43,755,154
Ensembl chr10:43,602,908...43,755,277 		JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAGA alpha-N-acetylgalactosaminidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:6,580,141...6,587,550
Ensembl chr 5:6,571,020...6,588,055 		JBrowse link
glycolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUT2 fucosyltransferase 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:54,034,666...54,044,891
Ensembl chr 6:54,034,684...54,047,224 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (MGI:3707622|PMID:12810822) MGI PMID:12810822 MGI:3707622 NCBI chr14:74,734,185...74,820,645
Ensembl chr14:74,734,189...74,887,763 		JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3GALT2 alpha 1,3-galactosyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:5445364|PMID:22875802)
PMID:10854427		 RGD
Ensembl
MGI		 PMID:10854427 PMID:22875802 GO_REF:0000107 MGI:5445364 RGD:1299594 NCBI chr 6:89,557,492...89,562,835
Ensembl chr 6:89,558,423...89,562,490 		JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in ISO
IBA		 (PMID:21873635) RGD
GO_Central		 PMID:9593693 PMID:21873635 RGD:70807 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
G FUT4 fucosyltransferase 4 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr 9:26,679,540...26,686,217
Ensembl chr 9:26,679,868...26,681,541 		JBrowse link
G FUT9 fucosyltransferase 9 involved_in IEA Ensembl GO_REF:0000107
G LOC100513844 galactoside 3(4)-L-fucosyltransferase involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr 2:73,152,451...73,171,616 JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) BHF-UCL PMID:10521438 MGI:1346847 NCBI chr 6:136,207,838...136,391,083
Ensembl chr 6:136,204,374...136,390,995 		JBrowse link
G ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 1:96,291,794...96,375,909
Ensembl chr 1:96,297,034...96,375,868 		JBrowse link
G TM9SF2 transmembrane 9 superfamily member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:68,407,834...68,469,956
Ensembl chr11:68,404,975...68,469,953 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLA galactosidase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:83,024,582...83,032,273
Ensembl chr  X:83,023,903...83,032,570 		JBrowse link
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISO (MGI:3718765|PMID:17488728) UniProt PMID:17488728 MGI:3718765
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr 5:22,889,654...22,897,386
Ensembl chr 5:22,889,656...22,897,508 		JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,140 		JBrowse link
G CREM cAMP responsive element modulator acts_upstream_of_or_within ISO (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr10:57,829,523...57,895,610
Ensembl chr10:57,829,518...57,895,610 		JBrowse link
G HEXB hexosaminidase subunit beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:78473|PMID:8789434) MGI
Ensembl		 PMID:8789434 GO_REF:0000107 MGI:78473 NCBI chr 2:83,745,263...83,784,762
Ensembl chr 2:83,744,627...83,784,759 		JBrowse link
G KIT KIT proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3797995|PMID:18308723) MGI
Ensembl		 PMID:18308723 GO_REF:0000107 MGI:3797995 NCBI chr 8:41,402,334...41,492,306
Ensembl chr 8:41,402,043...41,493,734 		JBrowse link
G MAP7 microtubule associated protein 7 acts_upstream_of_or_within ISO (MGI:3797995|PMID:18308723) MGI PMID:18308723 MGI:3797995 NCBI chr 1:27,606,021...27,782,754
Ensembl chr 1:27,606,036...27,782,747 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:136,633,410...137,201,213
Ensembl chr 6:136,633,441...137,201,252 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 1:268,371,569...268,383,559 JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA3 glucosylceramidase beta 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:16,897,275...17,012,886
Ensembl chr 8:16,897,288...17,044,570 		JBrowse link
G GLA galactosidase alpha acts_upstream_of_or_within ISO (MGI:1859538|PMID:10841515), (MGI:2155538|PMID:11752062), (MGI:86774|PMID:9122231)
(MGI:1860035|PMID:10840053), (MGI:3525994|PMID:15629890)		 MGI PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 MGI:1859538 MGI:1860035 MGI:2155538 MGI:3525994 MGI:86774 NCBI chr  X:83,024,582...83,032,273
Ensembl chr  X:83,023,903...83,032,570 		JBrowse link
G LOC100625897 lactase-phlorizin hydrolase involved_in ISO PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chr15:16,094,277...16,154,467 JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:136,633,410...137,201,213
Ensembl chr 6:136,633,441...137,201,252 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in ISO (PMID:17123352) BHF-UCL PMID:17123352 NCBI chr 1:268,371,569...268,383,559 JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G PIGL phosphatidylinositol glycan anchor biosynthesis class L ISO RGD PMID:9188481 RGD:729509 NCBI chr12:59,217,267...59,256,896
Ensembl chr12:59,201,556...59,256,829 		JBrowse link
G PIGM phosphatidylinositol glycan anchor biosynthesis class M ISO RGD PMID:11226175 RGD:70624 NCBI chr 4:90,461,507...90,464,500 JBrowse link
GPI anchor metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:100,733,552...100,820,603
Ensembl chr15:100,733,560...100,820,585 		JBrowse link
G PGAP3 post-GPI attachment to proteins phospholipase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,630,391...22,647,820
Ensembl chr12:22,630,435...22,647,813 		JBrowse link
GPI anchor release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPEP1 dipeptidase 1 involved_in IDA (PMID:17615681) UniProt PMID:17615681 NCBI chr 6:361,187...385,757
Ensembl chr 6:361,197...376,616 		JBrowse link
G GPLD1 glycosylphosphatidylinositol specific phospholipase D1 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:1097182|PMID:9716655)
(PMID:21873635)		 MGI
Ensembl
GO_Central		 PMID:9716655 PMID:21873635 GO_REF:0000107 MGI:1097182 NCBI chr 7:19,289,385...19,355,606
Ensembl chr 7:19,291,174...19,346,619 		JBrowse link
G NOTUM notum, palmitoleoyl-protein carboxylesterase NOT|involved_in ISO (MGI:5640887|PMID:25771893) UniProt PMID:25771893 MGI:5640887 NCBI chr12:1,033,814...1,044,412
Ensembl chr12:1,036,488...1,044,397 		JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:140,969,561...141,003,936
Ensembl chr13:140,969,602...141,003,929 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:115,525,515...115,593,265
Ensembl chr 6:115,524,636...115,593,270 		JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in IEA
IBA		 (PMID:21873635) Ensembl
GO_Central		 PMID:21873635 GO_REF:0000107 NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,966...37,599,710 		JBrowse link
lipopolysaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase acts_upstream_of_or_within ISO (MGI:3042753|PMID:15155618) MGI PMID:15155618 MGI:3042753 NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,966...37,599,710 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,610...35,323,356 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17391
    metabolic process 10260
      primary metabolic process 8689
        lipid metabolic process 1248
          liposaccharide metabolic process 77
            glycolipid metabolic process + 76
            lipopolysaccharide metabolic process + 1
paths to the root