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ONTOLOGY REPORT - ANNOTATIONS


Term:liposaccharide metabolic process
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Accession:GO:1903509 term browser browse the term
Definition:The chemical reactions and pathways involving liposaccharide.
Synonyms:exact_synonym: liposaccharide metabolism


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attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis, class K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:257,911,099...257,997,735
Ensembl chr 2:257,911,126...257,997,733
JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis, class S ISO (MGI:MGI:3688056|PMID:11483512) RGD PMID:11483512 MGI:MGI:3688056 NCBI chr10:65,591,638...65,606,175
Ensembl chr10:65,591,622...65,606,202
JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis, class T IBA
ISO
PMID:21873635
(MGI:MGI:3688056|PMID:11483512)
RGD PMID:11483512, PMID:21873635 MGI:MGI:3688056, RGD:13792537 NCBI chr 3:160,945,556...160,954,738
Ensembl chr 3:160,945,359...160,954,739
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:12802054)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:12802054, PMID:21873635 GO_REF:0000002, GO_REF:0000107, RGD:13792537 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnliprp2 pancreatic lipase related protein 2 IDA
ISO
IEA
(PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229)
GO_REF:0000107
RGD
Ensembl
PMID:15287741, PMID:17401110, PMID:18702514, PMID:20083229, PMID:8765145 GO_REF:0000107, RGD:2303162 NCBI chr 1:279,896,973...279,927,600
Ensembl chr 1:279,896,973...279,927,600
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3galt1 Beta-1,3-galactosyltransferase 1 ISO (PMID:9582303) RGD PMID:9582303 NCBI chr 3:53,699,409...54,269,612
Ensembl chr 3:54,253,949...54,267,292
JBrowse link
G B3galt2 Beta-1,3-galactosyltransferase 2 ISO (PMID:9582303) RGD PMID:9582303 NCBI chr13:60,435,946...60,444,957
Ensembl chr13:60,435,946...60,444,957
JBrowse link
G B4galt3 beta-1,4-galactosyltransferase 3 ISO (PMID:9405390) RGD PMID:9405390 NCBI chr13:89,643,847...89,649,880
Ensembl chr13:89,643,881...89,649,906
JBrowse link
G Fa2h fatty acid 2-hydroxylase ISS
IEA
IMP
ISO
GO_REF:0000024
GO_REF:0000041
PMID:17901466
(MGI:MGI:3696647|PMID:15658937), (MGI:MGI:3826747|PMID:18815260)
UniProt
RGD
PMID:15658937, PMID:18815260, PMID:17901466 GO_REF:0000024, GO_REF:0000041, MGI:MGI:3696647, MGI:MGI:3826747, RGD:13825191 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Gal3st1 galactose-3-O-sulfotransferase 1 ISO
IBA
(MGI:MGI:1355015|PMID:10727929)
PMID:21873635
RGD PMID:10727929, PMID:21873635 MGI:MGI:1355015, RGD:13792537 NCBI chr14:84,231,473...84,247,371
Ensembl chr14:84,231,639...84,247,369
JBrowse link
G Ugt8 UDP glycosyltransferase 8 IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase ISO
IBA
MGI:MGI:1856218 (MGI:MGI:2183819|PMID:11371512), (MGI:MGI:78941|PMID:8769874)
(PMID:8399327)
PMID:21873635
RGD PMID:8399327, PMID:8769874, PMID:11371512, PMID:21873635 MGI:MGI:2183819, MGI:MGI:78941, RGD:13792537 NCBI chr 6:122,177,195...122,239,411
Ensembl chr 6:122,178,602...122,239,614
JBrowse link
G Gba3 glucosylceramidase beta 3 ISO (PMID:17595169) RGD PMID:17595169 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Psap prosaposin IEA
ISO
GO_REF:0000107
MGI:MGI:2183897 (MGI:MGI:2183819|PMID:11371512)
Ensembl
RGD
PMID:11371512 GO_REF:0000107, MGI:MGI:2183819 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
galactosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st1 galactose-3-O-sulfotransferase 1 ISO (MGI:MGI:6436415|PMID:9030544) RGD PMID:9030544 MGI:MGI:6436415 NCBI chr14:84,231,473...84,247,371
Ensembl chr14:84,231,639...84,247,369
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013843.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:259,149,018...259,150,479 JBrowse link
G B3galt4 Beta-1,3-galactosyltransferase 4 IEA
ISO
GO_REF:0000107
(PMID:9582303)
Ensembl
RGD
PMID:9582303 GO_REF:0000107 NCBI chr20:5,446,104...5,447,679
Ensembl chr20:5,446,104...5,447,673
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 ISS
IBA
ISO
IDA
GO_REF:0000024
PMID:21873635
(PMID:1601877), (PMID:7487055), (PMID:7890749)
PMID:3140234
MGI:MGI:2158349|MGI:MGI:96074 (MGI:MGI:1331265|PMID:10021458), (MGI:MGI:83232|PMID:8855236)
UniProt
RGD
PMID:1601877, PMID:7487055, PMID:7890749, PMID:8855236, PMID:10021458, PMID:21873635, PMID:3140234 GO_REF:0000024, MGI:MGI:1331265, MGI:MGI:83232, RGD:13792537, RGD:21201261 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,607,103...11,619,595
Ensembl chr 3:11,607,225...11,619,593
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO
IBA
(MGI:MGI:1354410|PMID:10702226)
PMID:21873635
RGD PMID:10702226, PMID:21873635 MGI:MGI:1354410, RGD:13792537 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
G St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 1:135,336,374...135,406,699
Ensembl chr 1:135,336,374...135,406,700
JBrowse link
G St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr18:59,748,766...59,755,257
Ensembl chr18:59,748,444...59,755,226
JBrowse link
G St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 ISO (PMID:10766765) RGD PMID:10766765 NCBI chr 9:103,117,705...103,207,154
Ensembl chr 9:103,117,506...103,207,190
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO (MGI:MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt5 beta-1,4-galactosyltransferase 5 ISO (MGI:MGI:6196231|PMID:30114188) RGD PMID:30114188 MGI:MGI:6196231 NCBI chr 3:164,039,731...164,055,561
Ensembl chr 3:164,039,731...164,095,878
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:6196231|PMID:30114188)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30114188 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6196231 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator ISO
IBA
MGI:MGI:1861930 (MGI:MGI:894862|PMID:9223328)
PMID:21873635
RGD PMID:9223328, PMID:21873635 MGI:MGI:894862, RGD:13792537 NCBI chr10:40,438,394...40,450,927
Ensembl chr10:40,438,356...40,450,930
JBrowse link
G Hexa hexosaminidase subunit alpha ISO
ISS
MGI:MGI:1857181|MGI:MGI:2429698 (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:69059|PMID:7937929), (MGI:MGI:78473|PMID:8789434), (MGI:MGI:894862|PMID:9223328)
GO_REF:0000024
(PMID:8123671), (PMID:8672428), (PMID:9694901)
RGD
UniProt
PMID:7937929, PMID:8123671, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:9694901 GO_REF:0000024, MGI:MGI:1271008, MGI:MGI:69059, MGI:MGI:78473, MGI:MGI:894862 NCBI chr 8:64,325,435...64,350,775
Ensembl chr 8:64,325,435...64,350,773
JBrowse link
G Hexb hexosaminidase subunit beta ISO
IEA
ISS
MGI:MGI:1857438|MGI:MGI:2429701 (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:1331265|PMID:10021458), (MGI:MGI:2670850|PMID:12756243), (MGI:MGI:3041658|PMID:12657883), (MGI:MGI:3573807|PMID:15748167), (MGI:MGI:76816|PMID:8566348), (MGI:MGI:78473|PMID:8789434), (MGI:MGI:894862|PMID:9223328)
GO_REF:0000107
GO_REF:0000024
(PMID:8123671), (PMID:8672428)
RGD
Ensembl
UniProt
PMID:8123671, PMID:8566348, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:10021458, PMID:12657883, PMID:12756243, PMID:15748167 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1271008, MGI:MGI:1331265, MGI:MGI:2670850, MGI:MGI:3041658, MGI:MGI:3573807, MGI:MGI:76816, MGI:MGI:78473, MGI:MGI:894862 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Neu1 neuraminidase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,610,995...4,615,258
Ensembl chr20:4,610,995...4,615,247
JBrowse link
G Neu2 neuraminidase 2 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:MGI:1354405|PMID:10713120)
(PMID:14613940), (PMID:22228546)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10713120, PMID:14613940, PMID:22228546, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1354405, RGD:13792537 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
G Neu3 neuraminidase 3 ISS
ISO
IBA
GO_REF:0000024
(MGI:MGI:3765376|PMID:17708748)
(PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)
PMID:21873635
UniProt
RGD
PMID:10861246, PMID:11298736, PMID:15847605, PMID:17334392, PMID:17708748, PMID:21873635 GO_REF:0000024, MGI:MGI:3765376, RGD:13792537 NCBI chr 1:164,803,574...164,814,777
Ensembl chr 1:164,803,574...164,814,651
JBrowse link
G Neu4 neuraminidase 4 IBA
ISO
PMID:21873635
(MGI:MGI:4361102|PMID:19506080)
(PMID:15213228), (PMID:15847605)
RGD PMID:15213228, PMID:15847605, PMID:19506080, PMID:21873635 MGI:MGI:4361102, RGD:13792537 NCBI chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
JBrowse link
G NEWGENE_1308624 sialidase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:101,003,455...101,008,365
Ensembl chr 9:101,005,082...101,008,170
JBrowse link
ganglioside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln6 CLN6, transmembrane ER protein ISO (PMID:16857350) RGD PMID:16857350 NCBI chr 8:67,733,215...67,748,170
Ensembl chr 8:67,733,215...67,748,172
JBrowse link
G Gm2a GM2 ganglioside activator IDA RGD PMID:9770472 RGD:1598995 NCBI chr10:40,438,394...40,450,927
Ensembl chr10:40,438,356...40,450,930
JBrowse link
G Itgb8 integrin subunit beta 8 ISO MGI:MGI:2180548 (MGI:MGI:3607039|PMID:16251442) RGD PMID:16251442 MGI:MGI:3607039 NCBI chr 6:147,089,280...147,172,846
Ensembl chr 6:147,094,097...147,172,813
JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4galt alpha 1,4-galactosyltransferase (P blood group) ISO MGI:MGI:3624807|MGI:MGI:5445373 (MGI:MGI:3623723|PMID:16476743), (MGI:MGI:5445364|PMID:22875802) RGD PMID:16476743, PMID:22875802 MGI:MGI:3623723, MGI:MGI:5445364 NCBI chr 7:124,085,832...124,110,440
Ensembl chr 7:124,085,834...124,089,385
JBrowse link
globoside metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ISO (PMID:8855242) RGD PMID:8855242 NCBI chr 3:7,076,582...7,079,652 JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fa2h fatty acid 2-hydroxylase ISS
ISO
GO_REF:0000024
(MGI:MGI:5285470|PMID:21628453)
UniProt
RGD
PMID:21628453 GO_REF:0000024, MGI:MGI:5285470 NCBI chr19:43,545,380...43,596,788
Ensembl chr19:43,545,378...43,596,801
JBrowse link
G Ugcg UDP-glucose ceramide glucosyltransferase ISO
IBA
ISS
(PMID:8643456)
PMID:21873635
(MGI:MGI:2180222|PMID:10430909), (MGI:MGI:3603060|PMID:16109770), (MGI:MGI:5448789|PMID:22851168), (MGI:MGI:5510915|PMID:23748427)
GO_REF:0000024
RGD
UniProt
PMID:8643456, PMID:10430909, PMID:16109770, PMID:22851168, PMID:23748427, PMID:21873635 GO_REF:0000024, MGI:MGI:2180222, MGI:MGI:3603060, MGI:MGI:5448789, MGI:MGI:5510915, RGD:13792537 NCBI chr 5:76,376,722...76,419,564
Ensembl chr 5:76,386,836...76,419,560
JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO
IBA
(PMID:16293621), (PMID:19279011), (PMID:21700325), (PMID:24022302), (PMID:24211208), (PMID:9201993)
PMID:21873635
(MGI:MGI:5141165|PMID:21700325), (MGI:MGI:5501380|PMID:23707074), (MGI:MGI:6271235|PMID:24211208)
RGD PMID:9201993, PMID:16293621, PMID:19279011, PMID:21700325, PMID:23707074, PMID:24022302, PMID:24211208, PMID:21873635 MGI:MGI:5141165, MGI:MGI:5501380, MGI:MGI:6271235, RGD:13792537 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gba2 glucosylceramidase beta 2 IEA
ISO
ISS
GO_REF:0000002
(MGI:MGI:3690511|PMID:17080196), (MGI:MGI:5484792|PMID:23250757)
(PMID:17080196), (PMID:30308956)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:17080196, PMID:23250757, PMID:30308956 GO_REF:0000002, GO_REF:0000024, MGI:MGI:3690511, MGI:MGI:5484792 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Gba3 glucosylceramidase beta 3 NOT ISO (PMID:20728381)
(PMID:17595169), (PMID:26724485)
RGD PMID:17595169, PMID:20728381, PMID:26724485 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
glucosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO (MGI:MGI:3762988|PMID:17954912), (MGI:MGI:3795074|PMID:18346921) RGD PMID:17954912, PMID:18346921 MGI:MGI:3762988, MGI:MGI:3795074 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Psap prosaposin IEA
ISO
GO_REF:0000107
(MGI:MGI:3711591|PMID:17353235)
Ensembl
RGD
PMID:17353235 GO_REF:0000107, MGI:MGI:3711591 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gal3st2 galactose-3-O-sulfotransferase 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:100,982,996...100,994,226
Ensembl chr 9:100,990,523...100,993,206
JBrowse link
G Gal3st3 galactose-3-O-sulfotransferase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:220,668,544...220,678,300
Ensembl chr 1:220,668,544...220,678,299
JBrowse link
G Gal3st4 galactose-3-O-sulfotransferase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,583,110...19,592,444
Ensembl chr12:19,583,110...19,592,000
JBrowse link
G LOC103689999 saccharopine dehydrogenase-like oxidoreductase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:97,702,044...97,724,165
Ensembl chr13:97,941,757...97,963,824
Ensembl chr13:97,941,757...97,963,824
JBrowse link
G Sccpdh saccharopine dehydrogenase (putative) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:97,941,720...97,963,474
Ensembl chr13:97,941,757...97,963,824
JBrowse link
G St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ISO
IEA
(PMID:9266697)
GO_REF:0000107
RGD
Ensembl
PMID:9266697 GO_REF:0000107 NCBI chr19:43,273,251...43,324,265
Ensembl chr19:43,274,493...43,290,363
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ISO
IBA
(PMID:8288606)
PMID:21873635
RGD PMID:8288606, PMID:21873635 RGD:13792537 NCBI chr 8:36,264,741...36,314,811
Ensembl chr 8:36,264,750...36,314,811
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 ISO (MGI:MGI:2182536|PMID:11980897) RGD PMID:11980897 MGI:MGI:2182536 NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838
JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase ISO
ISS
(PMID:9741689)
GO_REF:0000024
RGD
UniProt
PMID:9741689 GO_REF:0000024 NCBI chr 7:123,563,047...123,572,074
Ensembl chr 7:123,563,059...123,572,082
JBrowse link
glycolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut2 fucosyltransferase 2 ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:3041936|PMID:14967068)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14967068 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3041936 NCBI chr 1:101,631,633...101,651,668
Ensembl chr 1:101,631,635...101,651,668
JBrowse link
G Psap prosaposin ISO (MGI:MGI:3707622|PMID:12810822) RGD PMID:12810822 MGI:MGI:3707622 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
G St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 ISO
ISS
(PMID:10206952)
GO_REF:0000024
RGD
UniProt
PMID:10206952 GO_REF:0000024 NCBI chr11:44,176,518...44,237,119
Ensembl chr11:44,192,940...44,237,100
JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3galt2 alpha 1,3-galactosyltransferase 2 IDA
ISO
MGI:MGI:1347344|MGI:MGI:3512453 (MGI:MGI:5445364|PMID:22875802)
PMID:12626403
RGD PMID:22875802, PMID:10854427, PMID:12626403 MGI:MGI:5445364, RGD:1299594, RGD:632674 NCBI chr 5:146,933,592...146,945,882
Ensembl chr 5:146,933,592...146,945,880
JBrowse link
G A4galt alpha 1,4-galactosyltransferase (P blood group) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:124,085,832...124,110,440
Ensembl chr 7:124,085,834...124,089,385
JBrowse link
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G B4galt6 beta-1,4-galactosyltransferase 6 IDA RGD PMID:9593693 RGD:70807 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
G St6galnac5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 ISO (MGI:MGI:1346847|PMID:10521438) RGD PMID:10521438 MGI:MGI:1346847 NCBI chr 2:258,025,177...259,150,709
Ensembl chr 2:258,025,177...258,052,835
JBrowse link
G St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 IDA PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr18:73,564,010...73,630,256
Ensembl chr18:73,564,247...73,625,137
JBrowse link
G Ugt8 UDP glycosyltransferase 8 TAS RGD PMID:7521399 RGD:70050 NCBI chr 2:229,644,373...229,718,678
Ensembl chr 2:229,644,382...229,718,659
JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha ISO (PMID:10838196), (PMID:8804427) RGD PMID:8804427, PMID:10838196 NCBI chr  X:105,405,915...105,417,331
Ensembl chr  X:105,406,792...105,417,323
JBrowse link
glycosphingolipid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt1 beta-1,4-N-acetyl-galactosaminyl transferase 1 ISO
IDA
MGI:MGI:2158349 (MGI:MGI:3797995|PMID:18308723)
PMID:3140234
RGD PMID:18308723, PMID:3140234 MGI:MGI:3797995, RGD:21201261 NCBI chr 7:70,439,273...70,459,556
Ensembl chr 7:70,452,579...70,459,880
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO
IEA
MGI:MGI:1857429 (MGI:MGI:3797995|PMID:18308723)
GO_REF:0000107
RGD
Ensembl
PMID:18308723 GO_REF:0000107, MGI:MGI:3797995 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Crem cAMP responsive element modulator ISO MGI:MGI:2158921 (MGI:MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:MGI:3797995 NCBI chr17:57,021,704...57,090,888
Ensembl chr17:57,031,766...57,090,888
JBrowse link
G Hexb hexosaminidase subunit beta ISO MGI:MGI:2429701 (MGI:MGI:78473|PMID:8789434) RGD PMID:8789434 MGI:MGI:78473 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO MGI:MGI:1856232 (MGI:MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:MGI:3797995 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Map7 microtubule-associated protein 7 ISO MGI:MGI:1889849 (MGI:MGI:3797995|PMID:18308723) RGD PMID:18308723 MGI:MGI:3797995 NCBI chr 1:15,620,665...15,748,203
Ensembl chr 1:15,620,653...15,748,203
JBrowse link
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Gla galactosidase, alpha ISO
IBA
MGI:MGI:1861794 (MGI:MGI:1859538|PMID:10841515), (MGI:MGI:1860035|PMID:10840053), (MGI:MGI:2155538|PMID:11752062), (MGI:MGI:3525994|PMID:15629890), (MGI:MGI:86774|PMID:9122231)
PMID:21873635
RGD PMID:9122231, PMID:10840053, PMID:10841515, PMID:11752062, PMID:15629890, PMID:21873635 MGI:MGI:1859538, MGI:MGI:1860035, MGI:MGI:2155538, MGI:MGI:3525994, MGI:MGI:86774, RGD:13792537 NCBI chr  X:105,405,915...105,417,331
Ensembl chr  X:105,406,792...105,417,323
JBrowse link
G Naga alpha-N-acetylgalactosaminidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,563,047...123,572,074
Ensembl chr 7:123,563,059...123,572,082
JBrowse link
glycosylceramide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ISO
IEA
(PMID:17123352)
GO_REF:0000107
RGD
Ensembl
PMID:17123352 GO_REF:0000107 NCBI chr 2:259,379,653...259,918,813
Ensembl chr 2:259,379,509...259,898,525
JBrowse link
G St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ISO (PMID:17123352) RGD PMID:17123352 NCBI chr 3:11,620,050...11,641,460
Ensembl chr 3:11,629,556...11,641,466
JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cwh43 cell wall biogenesis 43 C-terminal homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:37,315,479...37,361,728
Ensembl chr14:37,315,406...37,361,798
JBrowse link
G Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ISO
IBA
(MGI:MGI:1329093|PMID:9535917)
PMID:21873635
(PMID:10835346), (PMID:9535917), (PMID:9724629)
RGD PMID:9535917, PMID:9724629, PMID:10835346, PMID:21873635 MGI:MGI:1329093, RGD:13792537 NCBI chr 3:164,966,637...164,986,180
Ensembl chr 3:164,966,637...164,986,180
JBrowse link
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory TAS
IBA
ISO
IEA
IDA
PMID:21873635
(PMID:10835346)
GO_REF:0000107
PMID:9724629
RGD
Ensembl
PMID:10835346, PMID:9724629, PMID:21873635, PMID:9724629 GO_REF:0000107, RGD:69827, RGD:13792537, RGD:69827 NCBI chr 3:11,587,941...11,590,528
Ensembl chr 3:11,587,941...11,590,528
JBrowse link
G Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory ISO
IBA
(PMID:10835346)
PMID:21873635
RGD PMID:10835346, PMID:21873635 RGD:13792537 NCBI chr 2:188,583,664...188,584,179
Ensembl chr 2:188,583,664...188,584,179
JBrowse link
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 TAS RGD PMID:10702226 RGD:1331364 NCBI chr 7:117,394,367...117,397,950
Ensembl chr 7:117,394,372...117,397,956
JBrowse link
G LOC100910143 GPI ethanolamine phosphate transferase 2-like IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:1,567,713...1,596,004
Ensembl chr14:2,410,342...2,438,592
Ensembl chr14:2,410,342...2,438,592
JBrowse link
G LOC103694910 GPI mannosyltransferase 1 IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537
G Mppe1 metallophosphoesterase 1 ISS
ISO
GO_REF:0000024
(PMID:29374258)
UniProt
RGD
PMID:29374258 GO_REF:0000024 NCBI chr18:62,946,952...62,966,174
Ensembl chr18:62,946,953...62,965,538
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IMP RGD PMID:14734546 RGD:1303970 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963
JBrowse link
G Pgap2 post-GPI attachment to proteins 2 IMP
IBA
ISO
IEA
PMID:16407401
PMID:21873635
(PMID:29374258)
GO_REF:0000107
RGD
Ensembl
PMID:29374258, PMID:16407401, PMID:21873635 GO_REF:0000107, RGD:8553507, RGD:13792537 NCBI chr 1:167,309,021...167,335,550
Ensembl chr 1:167,309,051...167,334,741
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 ISO
IBA
(PMID:29374258)
PMID:21873635
RGD PMID:29374258, PMID:21873635 RGD:13792537 NCBI chr10:86,343,058...86,356,146
Ensembl chr10:86,343,064...86,355,006
JBrowse link
G Pgap4 post-GPI attachment to proteins GalNAc transferase 4 ISS
ISO
GO_REF:0000024
(PMID:29374258)
UniProt
RGD
PMID:29374258 GO_REF:0000024 NCBI chr 5:64,848,657...64,867,925
Ensembl chr 5:64,848,658...64,850,427
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A ISO
IEA
IBA
MGI:MGI:3652879 (MGI:MGI:80283|PMID:8611683)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:8611683, PMID:21873635 GO_REF:0000041, MGI:MGI:80283, RGD:13792537 NCBI chr  X:31,786,823...31,799,751
Ensembl chr  X:31,786,194...31,799,560
JBrowse link
G Pigb phosphatidylinositol glycan anchor biosynthesis, class B ISO
IBA
IEA
(PMID:8861954)
PMID:21873635
GO_REF:0000041
RGD
UniProt
PMID:8861954, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 8:79,691,407...79,715,284
Ensembl chr 8:79,691,407...79,715,284
JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C IEA
ISO
GO_REF:0000041
(PMID:27694521)
UniProt
RGD
PMID:27694521 GO_REF:0000041 NCBI chr13:79,886,832...79,889,305
Ensembl chr13:79,886,832...79,889,304
JBrowse link
G Pigf phosphatidylinositol glycan anchor biosynthesis, class F ISO
IEA
IBA
(MGI:MGI:1860649|PMID:10781593)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:10781593, PMID:21873635 GO_REF:0000041, MGI:MGI:1860649, RGD:13792537 NCBI chr 6:10,565,841...10,593,972
Ensembl chr 6:10,568,614...10,592,454
JBrowse link
G Pigg phosphatidylinositol glycan anchor biosynthesis, class G ISO
IEA
IBA
(PMID:15632136)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:15632136, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr14:2,410,339...2,438,630
Ensembl chr14:2,410,342...2,438,592
JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis, class H IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:102,258,621...102,272,826
Ensembl chr 6:102,263,337...102,272,777
JBrowse link
G Pigl phosphatidylinositol glycan anchor biosynthesis, class L IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:9188481, PMID:21873635 GO_REF:0000041, RGD:729509, RGD:13792537 NCBI chr10:48,774,018...48,831,848
Ensembl chr10:48,773,828...48,831,855
JBrowse link
G Pigm phosphatidylinositol glycan anchor biosynthesis, class M IDA
IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:11226175, PMID:21873635 GO_REF:0000041, RGD:70624, RGD:13792537 NCBI chr13:90,759,260...90,762,957
Ensembl chr13:90,759,260...90,762,957
JBrowse link
G Pign phosphatidylinositol glycan anchor biosynthesis, class N IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr13:25,510,593...25,662,943
Ensembl chr13:25,513,892...25,652,473
JBrowse link
G Pigo phosphatidylinositol glycan anchor biosynthesis, class O ISO
IEA
IBA
(MGI:MGI:1860649|PMID:10781593)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:10781593, PMID:21873635 GO_REF:0000041, MGI:MGI:1860649, RGD:13792537 NCBI chr 5:58,461,055...58,470,699
Ensembl chr 5:58,461,759...58,469,399
JBrowse link
G Pigp phosphatidylinositol glycan anchor biosynthesis, class P ISO
IEA
(MGI:MGI:3804747|PMID:10944123)
GO_REF:0000041
(PMID:28334793)
RGD
UniProt
PMID:10944123, PMID:28334793 GO_REF:0000041, MGI:MGI:3804747 NCBI chr11:34,592,128...34,598,253
Ensembl chr11:34,592,121...34,598,275
JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis, class Q ISO PomBase:SPBC30D10.11|SGD:S000003448 (MGI:MGI:1307040|PMID:9729469), (MGI:MGI:1339481|PMID:10373468) RGD PMID:9729469, PMID:10373468 MGI:MGI:1307040, MGI:MGI:1339481 NCBI chr10:15,289,530...15,305,593
Ensembl chr10:15,289,536...15,305,549
JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis, class U ISO (PMID:15034568) RGD PMID:15034568 NCBI chr 3:150,803,096...150,885,597
Ensembl chr 3:150,803,097...150,885,616
JBrowse link
G Pigv phosphatidylinositol glycan anchor biosynthesis, class V IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
UniProtKB:P38211 (PMID:15623507), (PMID:15720390)
UniProt
RGD
PMID:15623507, PMID:15720390, PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:151,886,132...151,899,024
Ensembl chr 5:151,886,035...151,898,022
JBrowse link
G Pigw phosphatidylinositol glycan anchor biosynthesis, class W IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr10:72,194,774...72,198,415
Ensembl chr10:72,194,929...72,196,437
JBrowse link
G Pigx phosphatidylinositol glycan anchor biosynthesis, class X IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr11:71,938,388...71,954,225
Ensembl chr11:71,938,388...71,954,224
JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis, class Y ISO
IBA
(PMID:16162815)
PMID:21873635
RGD PMID:16162815, PMID:21873635 RGD:13792537 NCBI chr 8:23,167,974...23,170,215
Ensembl chr 8:23,167,974...23,170,209
JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z ISO
IBA
UniProtKB:Q04174 (PMID:15208306)
PMID:21873635
RGD PMID:15208306, PMID:21873635 RGD:13792537 NCBI chr11:72,930,040...72,936,002
Ensembl chr11:72,931,297...72,934,823
Ensembl chr11:72,931,297...72,934,823
JBrowse link
G Pyurf PIGY upstream reading frame ISO
IBA
ISS
(PMID:16162815)
PMID:21873635
GO_REF:0000024
RGD
HGNC
PMID:16162815, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:88,584,242...88,587,877
Ensembl chr 4:88,584,242...88,587,877
JBrowse link
GPI anchor metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,066,170...61,134,963
Ensembl chr 9:61,066,175...61,134,963
JBrowse link
G Pgap3 post-GPI attachment to proteins phospholipase 3 ISO (PMID:17021251) RGD PMID:17021251 NCBI chr10:86,343,058...86,356,146
Ensembl chr10:86,343,064...86,355,006
JBrowse link
GPI anchor release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpep1 dipeptidase 1 ISO (PMID:17615681) RGD PMID:17615681 NCBI chr19:55,973,447...55,998,830
Ensembl chr19:55,982,740...55,998,208
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
UniProtKB:P80108 (MGI:MGI:1097182|PMID:9716655), (MGI:MGI:3583476|PMID:15946906), (MGI:MGI:3703397|PMID:16822939), (MGI:MGI:5447609|PMID:17720976)
(PMID:15907827), (PMID:17720976), (PMID:19135435), (PMID:2760042)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:2760042, PMID:9716655, PMID:15907827, PMID:15946906, PMID:16822939, PMID:17720976, PMID:19135435, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1097182, MGI:MGI:3583476, MGI:MGI:3703397, MGI:MGI:5447609, RGD:13792537 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Notum NOTUM, palmitoleoyl-protein carboxylesterase NOT ISO (MGI:MGI:5640887|PMID:25771893) RGD PMID:25771893 MGI:MGI:5640887 NCBI chr10:109,832,977...109,840,661
Ensembl chr10:109,832,981...109,840,047
JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galt6 beta-1,4-galactosyltransferase 6 IEA
ISO
GO_REF:0000107
(PMID:10320813)
Ensembl
RGD
PMID:10320813 GO_REF:0000107 NCBI chr18:15,462,913...15,525,584
Ensembl chr18:15,462,913...15,525,579
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase ISO
IBA
(PMID:1883828), (PMID:29343645)
PMID:21873635
RGD PMID:1883828, PMID:29343645, PMID:21873635 RGD:13792537 NCBI chr17:45,872,414...46,115,026
Ensembl chr17:45,872,414...46,115,004
JBrowse link
lipopolysaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase ISO (MGI:MGI:3042753|PMID:15155618) RGD PMID:15155618 MGI:MGI:3042753 NCBI chr17:45,872,414...46,115,026
Ensembl chr17:45,872,414...46,115,004
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C, delta ISO
IEA
(PMID:19279011)
GO_REF:0000107
RGD
Ensembl
PMID:19279011 GO_REF:0000107 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      primary metabolic process 10901
        lipid metabolic process 1378
          liposaccharide metabolic process 94
            glycolipid metabolic process + 93
            lipopolysaccharide metabolic process + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.