ONTOLOGY REPORT - ANNOTATIONS |
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Term: | liposaccharide metabolic process |
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Accession: | GO:1903509
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browse the term
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Definition: | The chemical reactions and pathways involving liposaccharide. |
Synonyms: | exact_synonym: | liposaccharide metabolism |
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Pnliprp2 |
pancreatic lipase related protein 2 |
involved_in |
IDA ISO |
(PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229) |
RGD |
PMID:15287741 PMID:17401110 PMID:18702514 PMID:20083229 PMID:8765145 |
RGD:2303162 |
NCBI chr 1:257,897,766...257,916,434
Ensembl chr 1:257,897,766...257,916,434
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B3galt1 |
Beta-1,3-galactosyltransferase 1 |
involved_in |
ISO |
(PMID:9582303) |
RGD |
PMID:9582303 |
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NCBI chr 3:52,253,413...52,826,508
Ensembl chr 3:52,253,618...52,825,313
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B3galt2 |
Beta-1,3-galactosyltransferase 2 |
involved_in |
ISO |
(PMID:9582303) |
RGD |
PMID:9582303 |
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NCBI chr13:55,389,406...55,398,419
Ensembl chr13:55,389,406...55,398,419
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B4galt3 |
beta-1,4-galactosyltransferase 3 |
involved_in |
ISO IBA IEA |
(PMID:9405390) GO_REF:0000033 GO_REF:0000107 |
RGD GO_Central Ensembl |
PMID:9405390 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr13:83,691,378...83,697,448
Ensembl chr13:83,691,446...83,697,448
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Fa2h |
fatty acid 2-hydroxylase |
involved_in |
ISS ISO IMP IEA |
GO_REF:0000024 (PMID:15658937), (PMID:18815260) (MGI:3696647|PMID:15658937), (MGI:3826747|PMID:18815260) PMID:17901466 GO_REF:0000041 |
UniProt RGD |
PMID:15658937 PMID:18815260 PMID:17901466 |
GO_REF:0000024 GO_REF:0000041 MGI:3696647 MGI:3826747, RGD:13825191 |
NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
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Gal3st1 |
galactose-3-O-sulfotransferase 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:10727929) |
GO_Central RGD |
PMID:10727929 |
GO_REF:0000033 |
NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388
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Ugt8 |
UDP glycosyltransferase 8 |
involved_in |
IDA IBA IEA |
PMID:8713090 GO_REF:0000033 GO_REF:0000041 |
GO_Central UniProt |
PMID:8713090 |
GO_REF:0000033 GO_REF:0000041, RGD:39458006 |
NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660
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Galc |
galactosylceramidase |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:8399327) MGI:1856218 (PMID:11371512) GO_REF:0000033 (MGI:78941|PMID:8769874) |
RGD GO_Central |
PMID:8399327 PMID:8769874 PMID:11371512 |
GO_REF:0000033 MGI:78941 |
NCBI chr 6:117,452,888...117,522,281
Ensembl chr 6:117,452,895...117,515,830
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Gba3 |
glucosylceramidase beta 3 |
involved_in |
ISO |
(PMID:17595169) |
RGD |
PMID:17595169 |
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NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653
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Psap |
prosaposin |
acts_upstream_of_or_within |
ISO |
MGI:2183897 (PMID:11371512) |
RGD |
PMID:11371512 |
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NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
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Gal3st1 |
galactose-3-O-sulfotransferase 1 |
involved_in |
ISO |
(MGI:6436415|PMID:9030544) (PMID:9030544) |
RGD |
PMID:9030544 |
MGI:6436415 |
NCBI chr14:78,868,049...78,886,402
Ensembl chr14:78,870,793...78,886,388
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B3galt4 |
Beta-1,3-galactosyltransferase 4 |
involved_in |
ISO IEA |
(PMID:9582303) GO_REF:0000107 |
RGD Ensembl |
PMID:9582303 |
GO_REF:0000107 |
NCBI chr20:4,936,089...4,937,664
Ensembl chr20:4,931,768...4,938,315
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B4galnt1 |
beta-1,4-N-acetyl-galactosaminyl transferase 1 |
involved_in acts_upstream_of_or_within |
ISS ISO IBA IEA IDA |
GO_REF:0000024 (PMID:8855236) MGI:2158349|MGI:96074 (PMID:10021458) GO_REF:0000033 GO_REF:0000107 (MGI:83232|PMID:8855236) PMID:3140234 (PMID:1601877), (PMID:7487055), (PMID:7890749) |
UniProt RGD GO_Central Ensembl |
PMID:1601877 PMID:7487055 PMID:7890749 PMID:8855236 PMID:10021458 PMID:3140234 More...
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GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:83232, RGD:21201261 |
NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
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Rps18 |
ribosomal protein S18 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146 Ensembl chr20:101,204,500...101,205,146
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St6galnac3 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133
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St6galnac4 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 3:15,872,230...15,885,250
Ensembl chr 3:15,872,532...15,885,243
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St6galnac5 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208
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St6galnac6 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 (PMID:10702226) |
GO_Central RGD |
PMID:10702226 |
GO_REF:0000033 |
NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496
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St8sia2 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 |
involved_in |
ISO |
(PMID:10766765) |
RGD |
PMID:10766765 |
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NCBI chr 1:127,762,573...127,838,017
Ensembl chr 1:127,762,573...127,838,091
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St8sia3 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 |
involved_in |
ISO |
(PMID:10766765) (PMID:7782326) (MGI:74245|PMID:7782326) |
RGD |
PMID:7782326 PMID:10766765 |
MGI:74245 |
NCBI chr18:57,754,349...57,760,839
Ensembl chr18:57,754,347...57,760,839
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St8sia4 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 |
involved_in |
ISO |
(PMID:10766765) |
RGD |
PMID:10766765 |
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NCBI chr 9:95,990,131...96,084,661
Ensembl chr 9:95,993,503...96,084,653
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St8sia6 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 |
involved_in |
ISO |
(MGI:2182536|PMID:11980897) |
RGD |
PMID:11980897 |
MGI:2182536 |
NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
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B4galt5 |
beta-1,4-galactosyltransferase 5 |
involved_in |
ISO |
(MGI:6196231|PMID:30114188) (PMID:30114188) |
RGD |
PMID:30114188 |
MGI:6196231 |
NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
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B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:30114188) (MGI:6196231|PMID:30114188) |
UniProt RGD |
PMID:30114188 |
GO_REF:0000024 MGI:6196231 |
NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
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St3gal1 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 1 |
involved_in |
ISO IBA |
(PMID:8027041) (PMID:8144500) GO_REF:0000033 (MGI:65558|PMID:8144500) |
RGD GO_Central |
PMID:8027041 PMID:8144500 |
GO_REF:0000033 MGI:65558 |
NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236
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St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
IDA ISO IBA IEA |
PMID:8144500 (PMID:22735313), (PMID:8144500) GO_REF:0000033 GO_REF:0000117 (MGI:6467685|PMID:22735313), (MGI:65558|PMID:8144500) (PMID:8920913) |
RGD GO_Central UniProt |
PMID:8144500 PMID:8920913 PMID:22735313 PMID:8144500 |
GO_REF:0000033 GO_REF:0000117 MGI:6467685 MGI:65558, RGD:68307 |
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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St3gal3 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6467685|PMID:22735313) |
Ensembl RGD |
PMID:22735313 |
GO_REF:0000107 MGI:6467685 |
NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810
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Gm2a |
ganglioside GM2 activator |
involved_in acts_upstream_of_or_within |
IBA ISO |
GO_REF:0000033 MGI:1861930 (PMID:9223328) |
GO_Central RGD |
PMID:9223328 |
GO_REF:0000033 |
NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757
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Hexa |
hexosaminidase subunit alpha |
involved_in acts_upstream_of_or_within |
ISS ISO IBA |
GO_REF:0000024 (PMID:8123671), (PMID:8672428), (PMID:9694901) GO_REF:0000033 MGI:1857181|MGI:2429698 (PMID:7937929), (PMID:8789434), (PMID:9223328), (PMID:9645704) |
UniProt RGD GO_Central |
PMID:7937929 PMID:8123671 PMID:8672428 PMID:8789434 PMID:9223328 PMID:9645704 PMID:9694901 More...
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GO_REF:0000024 GO_REF:0000033 |
NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013
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Hexb |
hexosaminidase subunit beta |
involved_in acts_upstream_of_or_within |
ISS ISO IBA IEA |
GO_REF:0000024 MGI:1857438|MGI:2429701 (PMID:10021458), (PMID:12657883), (PMID:12756243), (PMID:15748167), (PMID:8566348), (PMID:8789434), (PMID:9223328), (PMID:9645704) GO_REF:0000033 (PMID:8123671), (PMID:8672428) GO_REF:0000107 |
UniProt RGD GO_Central Ensembl |
PMID:8123671 PMID:8566348 PMID:8672428 PMID:8789434 PMID:9223328 PMID:9645704 PMID:10021458 PMID:12657883 PMID:12756243 PMID:15748167 More...
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GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
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Neu1 |
neuraminidase 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr20:3,897,480...3,901,745
Ensembl chr20:3,897,480...3,901,745
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Neu2 |
neuraminidase 2 |
involved_in |
ISS ISO IEA IBA |
GO_REF:0000024 (PMID:14613940), (PMID:22228546) (MGI:1354405|PMID:10713120) GO_REF:0000107 GO_REF:0000033 (PMID:10713120) |
UniProt RGD Ensembl GO_Central |
PMID:10713120 PMID:14613940 PMID:22228546 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:1354405 |
NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
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Neu3 |
neuraminidase 3 |
involved_in |
ISO IBA ISS |
(PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392) (PMID:11696012), (PMID:14970224), (PMID:17708748) GO_REF:0000033 (MGI:3040535|PMID:14970224), (MGI:3765376|PMID:17708748), (MGI:6478528|PMID:11696012) GO_REF:0000024 |
RGD GO_Central UniProt |
PMID:10861246 PMID:11298736 PMID:11696012 PMID:14970224 PMID:15847605 PMID:17334392 PMID:17708748 More...
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GO_REF:0000024 GO_REF:0000033 MGI:3040535 MGI:3765376 MGI:6478528 |
NCBI chr 1:154,137,732...154,148,879
Ensembl chr 1:154,050,855...154,148,813
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Neu4 |
neuraminidase 4 |
involved_in |
ISO IBA |
(PMID:15213228), (PMID:15847605) GO_REF:0000033 (MGI:4361102|PMID:19506080) |
RGD GO_Central |
PMID:15213228 PMID:15847605 PMID:19506080 |
GO_REF:0000033 MGI:4361102 |
NCBI chr 9:94,396,920...94,402,576
Ensembl chr 9:94,396,920...94,402,576
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Abca2 |
ATP binding cassette subfamily A member 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:17488728) (MGI:3718765|PMID:17488728) |
UniProt RGD |
PMID:17488728 |
GO_REF:0000024 MGI:3718765 |
NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
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Cln6 |
CLN6, transmembrane ER protein |
involved_in |
ISO |
(PMID:16857350) |
RGD |
PMID:16857350 |
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NCBI chr 8:63,303,356...63,318,360
Ensembl chr 8:63,303,029...63,318,360
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Gm2a |
ganglioside GM2 activator |
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IDA |
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RGD |
PMID:9770472 |
RGD:1598995 |
NCBI chr10:39,219,221...39,231,756
Ensembl chr10:39,219,243...39,231,757
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Itgb8 |
integrin subunit beta 8 |
acts_upstream_of_or_within |
ISO |
MGI:2180548 (PMID:16251442) |
RGD |
PMID:16251442 |
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NCBI chr 6:140,125,002...140,208,261
Ensembl chr 6:140,127,203...140,208,476
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Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (PMID:21408219) |
RGD |
PMID:21408219 |
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NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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A4galt |
alpha 1,4-galactosyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:3624807|MGI:5445373 (PMID:16476743), (PMID:22875802) |
RGD |
PMID:16476743 PMID:22875802 |
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NCBI chr 7:114,368,525...114,392,872
Ensembl chr 7:114,368,276...114,396,071
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St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
ISO IEA ISS |
(PMID:12716912) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:12716912 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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Gbgt1 |
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) |
involved_in |
ISO |
(PMID:8855242) |
RGD |
PMID:8855242 |
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NCBI chr 3:11,826,131...11,829,745
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Fa2h |
fatty acid 2-hydroxylase |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21628453) (MGI:5285470|PMID:21628453) |
UniProt RGD |
PMID:21628453 |
GO_REF:0000024 MGI:5285470 |
NCBI chr19:39,312,904...39,364,153
Ensembl chr19:39,312,906...39,364,153
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Ugcg |
UDP-glucose ceramide glucosyltransferase |
involved_in |
ISO IBA ISS |
(PMID:8643456) GO_REF:0000033 (MGI:2180222|PMID:10430909), (MGI:3603060|PMID:16109770), (MGI:5448789|PMID:22851168), (MGI:5510915|PMID:23748427) GO_REF:0000024 |
RGD GO_Central UniProt |
PMID:8643456 PMID:10430909 PMID:16109770 PMID:22851168 PMID:23748427 |
GO_REF:0000024 GO_REF:0000033 MGI:2180222 MGI:3603060 MGI:5448789 MGI:5510915 |
NCBI chr 5:74,032,978...74,065,701
Ensembl chr 5:74,032,978...74,065,393
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Gba1 |
glucosylceramidase beta 1 |
involved_in |
ISO IBA |
(MGI:5141165|PMID:21700325), (MGI:5501380|PMID:23707074), (MGI:6271235|PMID:24211208) (PMID:21700325), (PMID:23707074), (PMID:24211208) GO_REF:0000033 (PMID:16293621), (PMID:19279011), (PMID:21700325), (PMID:24022302), (PMID:24211208), (PMID:25584808), (PMID:9201993) |
RGD GO_Central |
PMID:9201993 PMID:16293621 PMID:19279011 PMID:21700325 PMID:23707074 PMID:24022302 PMID:24211208 PMID:25584808 More...
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GO_REF:0000033 MGI:5141165 MGI:5501380 MGI:6271235 |
NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Gba2 |
glucosylceramidase beta 2 |
involved_in |
ISO IEA ISS |
(PMID:17080196), (PMID:30308956) (PMID:17080196), (PMID:23250757) GO_REF:0000107 (MGI:3690511|PMID:17080196), (MGI:5484792|PMID:23250757) GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:17080196 PMID:23250757 PMID:30308956 |
GO_REF:0000024 GO_REF:0000107 MGI:3690511 MGI:5484792 |
NCBI chr 5:57,822,389...57,834,522
Ensembl chr 5:57,822,389...57,834,072
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Gba3 |
glucosylceramidase beta 3 |
involved_in NOT|involved_in |
ISO |
(PMID:17595169), (PMID:26724485) (PMID:20728381) |
RGD |
PMID:17595169 PMID:20728381 PMID:26724485 |
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NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653
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Gba1 |
glucosylceramidase beta 1 |
acts_upstream_of_or_within |
ISO |
(PMID:17954912), (PMID:18346921) |
RGD |
PMID:17954912 PMID:18346921 |
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NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
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Psap |
prosaposin |
acts_upstream_of_or_within |
ISO |
(PMID:17353235) |
RGD |
PMID:17353235 |
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NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
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Gal3st2 |
galactose-3-O-sulfotransferase 2 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 9:94,382,456...94,387,990
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Gal3st3 |
galactose-3-O-sulfotransferase 3 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 1:202,593,635...202,603,446
Ensembl chr 1:202,593,692...202,603,445
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Gal3st4 |
galactose-3-O-sulfotransferase 4 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr12:17,267,963...17,276,951
Ensembl chr12:17,267,963...17,276,833
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Sccpdh |
saccharopine dehydrogenase (putative) |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:91,400,120...91,421,875
Ensembl chr13:91,400,190...91,422,222
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St3gal2 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 2 |
involved_in |
ISO |
(PMID:9266697) |
RGD |
PMID:9266697 |
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NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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G |
St3gal4 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 4 |
involved_in |
ISO IBA |
(PMID:8288606) GO_REF:0000033 |
RGD GO_Central |
PMID:8288606 |
GO_REF:0000033 |
NCBI chr 8:33,415,666...33,465,319
Ensembl chr 8:33,415,671...33,524,389
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G |
St3gal6 |
ST3 beta-galactoside alpha-2,3-sialyltransferase 6 |
involved_in |
IBA ISO IEA ISS |
GO_REF:0000033 (PMID:10206952) GO_REF:0000107 GO_REF:0000024 |
GO_Central RGD Ensembl UniProt |
PMID:10206952 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:42,061,282...42,121,801
Ensembl chr11:42,077,621...42,121,776
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G |
St8sia6 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 |
acts_upstream_of_or_within |
ISO |
(PMID:11980897) |
RGD |
PMID:11980897 |
|
NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
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G |
Naga |
alpha-N-acetylgalactosaminidase |
involved_in |
ISO IEA ISS |
(PMID:9741689) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:9741689 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 7:113,846,358...113,855,430
Ensembl chr 7:113,846,374...113,855,315
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G |
Fut2 |
fucosyltransferase 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:3041936|PMID:14967068) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:14967068 |
GO_REF:0000024 GO_REF:0000107 MGI:3041936 |
NCBI chr 1:96,119,549...96,139,567
Ensembl chr 1:96,119,371...96,140,360
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G |
Mfsd8 |
major facilitator superfamily domain containing 8 |
acts_upstream_of_or_within |
ISO |
(PMID:27654426) |
RGD |
PMID:27654426 |
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NCBI chr 2:123,822,042...123,847,808
Ensembl chr 2:123,816,614...123,857,971
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G |
Psap |
prosaposin |
acts_upstream_of_or_within |
ISO |
(PMID:12810822) |
RGD |
PMID:12810822 |
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NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
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G |
A3galt2 |
alpha 1,3-galactosyltransferase 2 |
acts_upstream_of_or_within involved_in |
IDA ISO |
MGI:1347344|MGI:3512453 (PMID:22875802) PMID:10854427 PMID:12626403 |
RGD |
PMID:22875802 PMID:10854427 PMID:10854427 PMID:12626403 |
RGD:1299594, RGD:1299594, RGD:632674 |
NCBI chr 5:141,101,329...141,113,760
Ensembl chr 5:141,107,983...141,115,641
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G |
B4galnt1 |
beta-1,4-N-acetyl-galactosaminyl transferase 1 |
involved_in |
IDA |
PMID:1606358 |
UniProt |
PMID:1606358 |
RGD:21201272 |
NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
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G |
B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
IDA IBA |
GO_REF:0000033 |
GO_Central RGD |
PMID:9593693 |
GO_REF:0000033, RGD:70807 |
NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
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G |
Fut4 |
fucosyltransferase 4 |
involved_in |
ISO ISS |
(PMID:29593094) GO_REF:0000024 |
RGD UniProt |
PMID:29593094 |
GO_REF:0000024 |
NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682
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G |
Fut4-ps1 |
fucosyltransferase 4, pseudogene 1 |
involved_in |
ISO |
(PMID:29593094) |
RGD |
PMID:29593094 |
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NCBI chr 9:1,569,605...1,572,022
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G |
Fut9 |
fucosyltransferase 9 |
involved_in |
ISO ISS |
(PMID:29593094) GO_REF:0000024 |
RGD UniProt |
PMID:29593094 |
GO_REF:0000024 |
NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130
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G |
St6galnac5 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 |
involved_in |
ISO |
(MGI:1346847|PMID:10521438) (PMID:10521438) |
RGD |
PMID:10521438 |
MGI:1346847 |
NCBI chr 2:241,741,933...241,911,214
Ensembl chr 2:241,742,688...241,911,208
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G |
St8sia5 |
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 |
involved_in |
IDA |
PMID:1606358 |
UniProt |
PMID:1606358 |
RGD:21201272 |
NCBI chr18:70,736,395...70,802,537
Ensembl chr18:70,736,602...70,797,789
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G |
Tm9sf2 |
transmembrane 9 superfamily member 2 |
involved_in |
ISO |
(PMID:30660999) |
RGD |
PMID:30660999 |
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NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049
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G |
Ugt8 |
UDP glycosyltransferase 8 |
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TAS |
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RGD |
PMID:7521399 |
RGD:70050 |
NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660
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G |
Gla |
galactosidase, alpha |
involved_in |
ISO IMP |
(PMID:10838196), (PMID:8804427) |
RGD |
PMID:8804427 PMID:10838196 PMID:34320241 |
RGD:401976418 |
NCBI chr X:97,769,227...97,780,646
Ensembl chr X:97,768,996...97,780,664
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G |
Abca2 |
ATP binding cassette subfamily A member 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:17488728) (MGI:3718765|PMID:17488728) |
UniProt RGD |
PMID:17488728 |
GO_REF:0000024 MGI:3718765 |
NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
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G |
B4galnt1 |
beta-1,4-N-acetyl-galactosaminyl transferase 1 |
involved_in acts_upstream_of_or_within |
IDA ISO |
PMID:3140234 MGI:2158349 (PMID:18308723) |
RGD |
PMID:18308723 PMID:3140234 |
RGD:21201261 |
NCBI chr 7:62,988,429...62,996,190
Ensembl chr 7:62,988,930...62,996,190
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G |
Bax |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1857429 (PMID:18308723) |
RGD |
PMID:18308723 |
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NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
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G |
Crem |
cAMP responsive element modulator |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2158921 (PMID:18308723) |
Ensembl RGD |
PMID:18308723 |
GO_REF:0000107 |
NCBI chr17:54,238,889...54,305,989
Ensembl chr17:54,239,030...54,305,989
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G |
Hexb |
hexosaminidase subunit beta |
acts_upstream_of_or_within |
ISO |
MGI:2429701 (PMID:8789434) |
RGD |
PMID:8789434 |
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NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
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G |
Kit |
KIT proto-oncogene receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
MGI:1856232 (PMID:18308723) |
RGD |
PMID:18308723 |
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NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
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G |
Map7 |
microtubule-associated protein 7 |
acts_upstream_of_or_within |
ISO |
MGI:1889849 (PMID:18308723) |
RGD |
PMID:18308723 |
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NCBI chr 1:14,910,433...15,037,574
Ensembl chr 1:14,910,551...15,037,574
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G |
St6galnac3 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
involved_in |
ISO |
(PMID:17123352) |
RGD |
PMID:17123352 |
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NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133
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G |
St6galnac6 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
involved_in |
ISO |
(PMID:17123352) |
RGD |
PMID:17123352 |
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NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496
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G |
Gba3 |
glucosylceramidase beta 3 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653
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G |
Gla |
galactosidase, alpha |
acts_upstream_of_or_within |
ISO |
MGI:1861794 (PMID:10840053), (PMID:10841515), (PMID:11752062), (PMID:15629890), (PMID:9122231) |
RGD |
PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 |
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NCBI chr X:97,769,227...97,780,646
Ensembl chr X:97,768,996...97,780,664
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G |
Lct |
lactase |
involved_in |
IDA |
PMID:4752949 |
UniProt |
PMID:4752949 |
RGD:151356630 |
NCBI chr13:39,781,929...39,824,456
Ensembl chr13:39,781,929...39,824,456
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G |
St6galnac3 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
involved_in |
ISO IEA |
(PMID:17123352) GO_REF:0000107 |
RGD Ensembl |
PMID:17123352 |
GO_REF:0000107 |
NCBI chr 2:242,129,755...242,645,120
Ensembl chr 2:242,129,763...242,645,133
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G |
St6galnac6 |
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 |
involved_in |
ISO |
(PMID:17123352) |
RGD |
PMID:17123352 |
|
NCBI chr 3:15,894,275...15,907,502
Ensembl chr 3:15,885,968...15,907,496
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G |
AABR07038703.1 |
|
involved_in |
IEA |
GO_REF:0000043 |
UniProt |
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GO_REF:0000043 |
Ensembl chr X:54,564,018...54,565,271
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G |
Cwh43 |
cell wall biogenesis 43 C-terminal homolog |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:34,754,279...34,800,530
Ensembl chr14:34,754,289...34,800,814
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G |
Dpm1 |
dolichyl-phosphate mannosyltransferase subunit 1, catalytic |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:10835346), (PMID:9535917) (PMID:9535917) GO_REF:0000033 (PMID:9535917), (PMID:9724629) |
RGD GO_Central |
PMID:9535917 PMID:9724629 PMID:10835346 |
GO_REF:0000033 |
NCBI chr 3:156,919,979...156,939,522
Ensembl chr 3:156,919,979...156,939,536
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G |
Dpm2 |
dolichyl-phosphate mannosyltransferase subunit 2, regulatory |
involved_in acts_upstream_of_or_within |
TAS IBA IEA ISO IDA |
GO_REF:0000033 GO_REF:0000107 (PMID:10835346), (PMID:16162815) PMID:9724629 |
GO_Central Ensembl RGD |
PMID:10835346 PMID:16162815 PMID:9724629 PMID:9724629 |
GO_REF:0000033 GO_REF:0000107, RGD:69827, RGD:69827 |
NCBI chr 3:15,855,952...15,858,867
Ensembl chr 3:15,856,182...15,869,165 Ensembl chr 3:15,856,182...15,869,165
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G |
Dpm3 |
dolichyl-phosphate mannosyltransferase subunit 3, regulatory |
involved_in |
ISO IBA |
(PMID:10835346) GO_REF:0000033 |
RGD GO_Central |
PMID:10835346 |
GO_REF:0000033 |
NCBI chr 2:174,676,532...174,677,047
Ensembl chr 2:174,676,363...174,677,668 Ensembl chr15:174,676,363...174,677,668
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G |
Gpaa1 |
glycosylphosphatidylinositol anchor attachment 1 |
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TAS |
|
RGD |
PMID:10702226 |
RGD:1331364 |
NCBI chr 7:108,051,896...108,055,479
Ensembl chr 7:108,051,861...108,055,484
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G |
Mppe1 |
metallophosphoesterase 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000043 (PMID:29374258) |
UniProt RGD |
PMID:29374258 |
GO_REF:0000024 GO_REF:0000043 |
NCBI chr18:60,763,418...60,781,553
Ensembl chr18:60,763,419...60,781,553
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G |
Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
|
IMP |
|
RGD |
PMID:14734546 |
RGD:1303970 |
NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
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G |
Pgap2 |
post-GPI attachment to proteins 2 |
involved_in |
IMP IBA IEA ISO |
PMID:16407401 GO_REF:0000033 GO_REF:0000043 (PMID:29374258) |
GO_Central UniProt RGD |
PMID:29374258 PMID:16407401 |
GO_REF:0000033 GO_REF:0000043, RGD:8553507 |
NCBI chr 1:156,591,540...156,618,116
Ensembl chr 1:156,591,615...156,618,114
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G |
Pgap3 |
post-GPI attachment to proteins phospholipase 3 |
involved_in |
ISO IBA |
(PMID:29374258) GO_REF:0000033 |
RGD GO_Central |
PMID:29374258 |
GO_REF:0000033 |
NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628
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G |
Pgap4 |
post-GPI attachment to proteins GalNAc transferase 4 |
involved_in |
ISS IBA ISO |
GO_REF:0000024 GO_REF:0000033 (PMID:29374258) |
UniProt GO_Central RGD |
PMID:29374258 |
GO_REF:0000024 GO_REF:0000033 |
NCBI chr 5:63,931,916...63,947,004
Ensembl chr 5:63,930,682...63,951,716
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G |
Piga |
phosphatidylinositol glycan anchor biosynthesis, class A |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000041 MGI:3652879 (PMID:8611683) GO_REF:0000033 |
UniProt RGD GO_Central |
PMID:8611683 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr X:30,043,033...30,055,861
Ensembl chr X:30,042,343...30,055,804
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G |
Pigb |
phosphatidylinositol glycan anchor biosynthesis, class B |
involved_in |
ISO IBA |
(PMID:8861954) GO_REF:0000033 |
RGD GO_Central |
PMID:8861954 |
GO_REF:0000033 |
NCBI chr 8:73,751,756...73,775,679
Ensembl chr 8:73,751,798...73,775,679
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G |
Pigc |
phosphatidylinositol glycan anchor biosynthesis, class C |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000041 (PMID:16162815), (PMID:27694521) |
UniProt RGD |
PMID:16162815 PMID:27694521 |
GO_REF:0000024 GO_REF:0000041 |
NCBI chr13:74,343,619...74,346,148
Ensembl chr13:74,296,854...74,346,211
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G |
Pigf |
phosphatidylinositol glycan anchor biosynthesis, class F |
involved_in |
ISO IBA IEA |
(PMID:33386993) (PMID:10781593) GO_REF:0000033 GO_REF:0000041 (MGI:1860649|PMID:10781593) |
RGD GO_Central UniProt |
PMID:10781593 PMID:33386993 |
GO_REF:0000033 GO_REF:0000041 MGI:1860649 |
NCBI chr 6:7,589,584...7,617,719
Ensembl chr 6:7,589,570...7,639,675
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G |
Pigg |
phosphatidylinositol glycan anchor biosynthesis, class G |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:15632136) GO_REF:0000041 |
RGD UniProt |
PMID:15632136 |
GO_REF:0000041 |
NCBI chr14:1,404,911...1,433,199
Ensembl chr14:1,406,798...1,433,187
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G |
Pigh |
phosphatidylinositol glycan anchor biosynthesis, class H |
involved_in |
ISO IBA IEA |
(PMID:16162815) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:16162815 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 6:97,874,903...97,897,188
Ensembl chr 6:97,882,903...97,897,142
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G |
Pigl |
phosphatidylinositol glycan anchor biosynthesis, class L |
|
IDA |
|
RGD |
PMID:9188481 |
RGD:729509 |
NCBI chr10:47,142,160...47,199,892
Ensembl chr10:47,141,780...47,200,145
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G |
Pigm |
phosphatidylinositol glycan anchor biosynthesis, class M |
involved_in |
IDA IBA IEA |
GO_REF:0000033 GO_REF:0000041 |
GO_Central UniProt RGD |
PMID:11226175 |
GO_REF:0000033 GO_REF:0000041, RGD:70624 |
NCBI chr13:84,838,329...84,842,026
Ensembl chr13:84,838,175...84,843,381
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G |
Pign |
phosphatidylinositol glycan anchor biosynthesis, class N |
involved_in |
IEA IBA |
GO_REF:0000041 GO_REF:0000033 |
UniProt GO_Central |
|
GO_REF:0000033 GO_REF:0000041 |
NCBI chr13:21,659,092...21,812,932
Ensembl chr13:21,662,455...21,806,790
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G |
Pigo |
phosphatidylinositol glycan anchor biosynthesis, class O |
involved_in |
ISO IBA IEA |
(MGI:1860649|PMID:10781593) (PMID:10781593) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:10781593 |
GO_REF:0000033 GO_REF:0000041 MGI:1860649 |
NCBI chr 5:57,244,721...57,256,252
Ensembl chr 5:57,245,166...57,254,146
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G |
Pigp |
phosphatidylinositol glycan anchor biosynthesis, class P |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:16162815), (PMID:28334793) (PMID:10944123) GO_REF:0000033 |
RGD GO_Central |
PMID:10944123 PMID:16162815 PMID:28334793 |
GO_REF:0000033 |
NCBI chr11:33,682,943...33,689,111
Ensembl chr11:33,682,948...33,689,321
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G |
Pigq |
phosphatidylinositol glycan anchor biosynthesis, class Q |
involved_in acts_upstream_of_or_within |
ISO IBA |
(PMID:16162815) PomBase:SPBC30D10.11|SGD:S000003448 (PMID:10373468), (PMID:9729469) GO_REF:0000033 |
RGD GO_Central |
PMID:9729469 PMID:10373468 PMID:16162815 |
GO_REF:0000033 |
NCBI chr10:14,942,571...14,958,584
Ensembl chr10:14,942,577...14,958,584
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G |
Pigu |
phosphatidylinositol glycan anchor biosynthesis, class U |
involved_in |
ISO |
(PMID:15034568) |
RGD |
PMID:15034568 |
|
NCBI chr 3:143,784,831...143,881,268
Ensembl chr 3:143,784,832...143,880,807
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G |
Pigv |
phosphatidylinositol glycan anchor biosynthesis, class V |
involved_in |
ISO IBA IEA |
UniProtKB:P38211 (PMID:15623507), (PMID:15720390) GO_REF:0000033 GO_REF:0000041 |
RGD GO_Central UniProt |
PMID:15623507 PMID:15720390 |
GO_REF:0000033 GO_REF:0000041 |
NCBI chr 5:145,889,642...145,901,533
Ensembl chr 5:145,889,646...145,901,533
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G |
Pigw |
phosphatidylinositol glycan anchor biosynthesis, class W |
involved_in |
IEA IBA |
GO_REF:0000041 GO_REF:0000033 |
UniProt GO_Central |
|
GO_REF:0000033 GO_REF:0000041 |
NCBI chr10:69,746,996...69,782,656
Ensembl chr10:69,748,789...69,790,475
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G |
Pigx |
phosphatidylinositol glycan anchor biosynthesis, class X |
involved_in |
IEA |
GO_REF:0000041 |
UniProt |
|
GO_REF:0000041 |
NCBI chr11:68,687,126...68,703,067
Ensembl chr11:68,687,093...68,703,472
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G |
Pigy |
phosphatidylinositol glycan anchor biosynthesis, class Y |
acts_upstream_of_or_within |
ISO |
(PMID:16162815) |
RGD |
PMID:16162815 |
|
NCBI chr 8:20,689,621...20,691,863
Ensembl chr 8:20,689,502...20,692,585
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|
G |
Pigz |
phosphatidylinositol glycan anchor biosynthesis, class Z |
involved_in |
ISO |
UniProtKB:Q04174 (PMID:15208306) |
RGD |
PMID:15208306 |
|
NCBI chr11:68,831,847...68,851,798
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|
G |
Slc30a5 |
solute carrier family 30 member 5 |
acts_upstream_of_positive_effect |
ISO |
(PMID:35525268) |
RGD |
PMID:35525268 |
|
NCBI chr 2:31,945,745...31,975,969
Ensembl chr 2:31,945,729...31,975,934
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|
|
G |
Pgap1 |
post-GPI attachment to proteins inositol deacylase 1 |
involved_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 9:55,975,574...56,044,325
Ensembl chr 9:55,975,667...56,044,464
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G |
Pgap3 |
post-GPI attachment to proteins phospholipase 3 |
involved_in |
ISO |
(PMID:17021251) |
RGD |
PMID:17021251 |
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NCBI chr10:83,387,113...83,399,357
Ensembl chr10:83,387,113...83,398,628
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G |
B4galt4 |
beta-1,4-galactosyltransferase 4 |
involved_in |
ISO ISS |
(PMID:9792633) GO_REF:0000024 |
RGD UniProt |
PMID:9792633 |
GO_REF:0000024 |
NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671
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G |
B4galt6 |
beta-1,4-galactosyltransferase 6 |
involved_in |
ISO |
(PMID:10320813) |
RGD |
PMID:10320813 |
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NCBI chr18:11,958,382...12,015,247
Ensembl chr18:11,958,390...12,015,247
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G |
Aoah |
acyloxyacyl hydrolase |
involved_in |
ISO IBA |
(PMID:1883828), (PMID:29343645) GO_REF:0000033 |
RGD GO_Central |
PMID:1883828 PMID:29343645 |
GO_REF:0000033 |
NCBI chr17:43,808,110...44,049,458
Ensembl chr17:43,809,638...44,049,148
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G |
Aoah |
acyloxyacyl hydrolase |
acts_upstream_of_or_within |
ISO |
(PMID:15155618) |
RGD |
PMID:15155618 |
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NCBI chr17:43,808,110...44,049,458
Ensembl chr17:43,809,638...44,049,148
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G |
Prkcd |
protein kinase C, delta |
involved_in |
ISO IEA |
(PMID:19279011) GO_REF:0000107 |
RGD Ensembl |
PMID:19279011 |
GO_REF:0000107 |
NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352
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G |
Mir127 |
microRNA 127 |
acts_upstream_of |
ISO |
UniProtKB:P04062 (PMID:25584808) |
RGD |
PMID:25584808 |
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NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311
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G |
Mir16 |
microRNA 16 |
acts_upstream_of_or_within |
ISO |
UniProtKB:P04062 (PMID:25584808) |
RGD |
PMID:25584808 |
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NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
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G |
Mir195 |
microRNA 195 |
acts_upstream_of_or_within |
ISO |
UniProtKB:P04062 (PMID:25584808) |
RGD |
PMID:25584808 |
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NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924
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Term paths to the root
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