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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic vesicle recycling
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Accession:GO:1903421 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.
Comment:An example of this is mouse LRRK2 (Q5S006) in PMID:21307259 inferred from mutant phenotype
Synonyms:narrow_synonym: regulation of kiss-and-run synaptic vesicle recycling;   regulation of kiss-and-stay synaptic vesicle recycling


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regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vamp2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936595:1,385,692...1,389,484 JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004936580:5,123,196...5,142,976 JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:5603022 NCBI chrNW_004936501:13,370,678...13,378,933 JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chrNW_004936578:5,680,748...5,691,666 JBrowse link
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936607:3,576,357...3,632,423 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Mff mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936525:8,604,478...8,636,352 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:19628693
(MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chrNW_004936588:2,504,372...2,535,993 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Tor1a torsin family 1 member A involved_in ISO (PMID:21102408) UniProt PMID:21102408 NCBI chrNW_004936487:17,012,661...17,020,657 JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chrNW_004936481:14,971,977...15,411,253 JBrowse link
G Pclo piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chrNW_004936734:1,273,055...1,674,913 JBrowse link
G Plaa phospholipase A2 activating protein involved_in ISO (MGI:5883825|PMID:28413018) UniProt PMID:28413018 MGI:5883825 NCBI chrNW_004936611:2,665,294...2,698,372 JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in ISO PMID:20098723 SynGO PMID:20098723 RGD:12050105 NCBI chrNW_004936721:892,704...916,965 JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (MGI:5438074|PMID:22536397) MGI PMID:22536397 MGI:5438074 NCBI chrNW_004936476:20,953,377...21,351,925 JBrowse link
G Calm1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936488:17,580,425...17,588,480 JBrowse link
G Calm2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936508:5,207,909...5,223,780 JBrowse link
G Calm3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936664:471,446...480,858 JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:5807028 NCBI chrNW_004936477:22,225,624...22,238,825 JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chrNW_004936487:15,767,897...15,797,722 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:6189511 NCBI chrNW_004936607:628,469...761,117 JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936498:13,785,638...13,885,931 JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) SynGO PMID:15386003 MGI:3054280 NCBI chrNW_004936588:2,070,873...2,088,144 JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISO (MGI:4830393|PMID:20810903) SynGO PMID:20810903 MGI:4830393 NCBI chrNW_004936521:5,576,705...5,614,738 JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chrNW_004936555:6,216,202...6,283,012 JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004936550:730,462...874,601 JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chrNW_004936471:33,936,721...33,958,439 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chrNW_004936588:2,504,372...2,535,993 JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chrNW_004936664:3,307,562...3,318,184 JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004936510:7,222,200...7,345,138 JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:6189675 NCBI chrNW_004936581:1,516,199...1,557,992 JBrowse link
G Vamp4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chrNW_004936481:15,480,865...15,515,851 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12130
    regulation of biological process 8396
      regulation of localization 2606
        regulation of transport 1695
          regulation of synaptic vesicle recycling 32
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 15
            regulation of recycling endosome localization within postsynapse 1
            regulation of synaptic vesicle endocytosis + 25
Path 2
Term Annotations click to browse term
  biological_process 12130
    localization 4860
      establishment of localization 3466
        transport 3300
          vesicle-mediated transport 1137
            vesicle-mediated transport in synapse 242
              synaptic vesicle cycle 210
                synaptic vesicle recycling 67
                  regulation of synaptic vesicle recycling 32
                    negative regulation of synaptic vesicle recycling + 3
                    positive regulation of synaptic vesicle recycling + 15
                    regulation of recycling endosome localization within postsynapse 1
                    regulation of synaptic vesicle endocytosis + 25
paths to the root