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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic vesicle recycling
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Accession:GO:1903421 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.
Comment:An example of this is mouse LRRK2 (Q5S006) in PMID:21307259 inferred from mutant phenotype
Synonyms:narrow_synonym: regulation of kiss-and-run synaptic vesicle recycling;   regulation of kiss-and-stay synaptic vesicle recycling


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regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5 cyclin dependent kinase 5 involved_in NAS (PMID:22745285) ParkinsonsUK-UCL PMID:22745285 NCBI chr 7:151,053,815...151,057,897
Ensembl chr 7:151,053,815...151,057,897
JBrowse link
G FGF14 fibroblast growth factor 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:101,710,804...102,402,443
Ensembl chr13:101,710,804...102,402,457
JBrowse link
G SNCA synuclein alpha involved_in TAS (PMID:23983262) ParkinsonsUK-UCL PMID:23983262 NCBI chr 4:89,724,099...89,838,324
Ensembl chr 4:89,700,345...89,838,315
JBrowse link
G VAMP2 vesicle associated membrane protein 2 involved_in ISO
IEA
RGD
Ensembl
PMID:21808019 GO_REF:0000107 RGD:13506237 NCBI chr17:8,159,147...8,162,948
Ensembl chr17:8,159,149...8,163,546
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:155,859,502...155,885,199
Ensembl chr 1:155,859,567...155,885,199
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 involved_in IEA
ISO
Ensembl
RGD
PMID:26843638 GO_REF:0000107 RGD:11342679 NCBI chr15:22,867,052...22,980,898
Ensembl chr15:22,867,052...22,981,063
JBrowse link
G STX1B syntaxin 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:30,989,256...31,010,638
Ensembl chr16:30,989,256...31,010,638
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA13 ATP binding cassette subfamily A member 13 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:48,171,424...48,647,497
Ensembl chr 7:48,171,458...48,647,497
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 involved_in IEA
ISO
Ensembl
RGD
PMID:19762466 GO_REF:0000107 RGD:13461856 NCBI chr 3:184,174,855...184,184,091
Ensembl chr 3:184,174,689...184,184,091
JBrowse link
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989
JBrowse link
G DNM1 dynamin 1 involved_in IEA
ISO
Ensembl
RGD
PMID:17437541 GO_REF:0000107 RGD:8554440 NCBI chr 9:128,203,379...128,255,244
Ensembl chr 9:128,191,655...128,255,248
JBrowse link
G DNM1L dynamin 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:32,679,296...32,745,650
Ensembl chr12:32,679,200...32,745,650
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA
ISO
Ensembl
RGD
PMID:18445495 GO_REF:0000107 RGD:13462049 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G MFF mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 2:227,325,233...227,357,836
Ensembl chr 2:227,325,151...227,357,836
JBrowse link
G NLGN1 neuroligin 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:173,395,929...174,294,372
Ensembl chr 3:173,396,284...174,286,644
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr11:85,957,175...86,069,860
Ensembl chr11:85,957,175...86,069,882
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in IEA
ISO
Ensembl
RGD
PMID:26627835 GO_REF:0000107 RGD:11532172 NCBI chr 8:22,441,053...22,541,466
Ensembl chr 8:22,440,819...22,541,142
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in IEA
ISO
Ensembl
RGD
PMID:14532001 GO_REF:0000107 RGD:13464359 NCBI chr19:4,360,369...4,400,547
Ensembl chr19:4,360,370...4,400,547
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 6:83,552,885...83,709,403
Ensembl chr 6:83,552,880...83,709,691
JBrowse link
G TOR1A torsin family 1 member A involved_in IMP (PMID:21102408) UniProt PMID:21102408 NCBI chr 9:129,812,942...129,824,136
Ensembl chr 9:129,812,942...129,824,244
JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:128,203,379...128,255,244
Ensembl chr 9:128,191,655...128,255,248
JBrowse link
G DNM3 dynamin 3 involved_in IEA
ISO
Ensembl
RGD
PMID:23687302 GO_REF:0000107 RGD:13462065 NCBI chr 1:171,841,495...172,418,466
Ensembl chr 1:171,841,498...172,418,466
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chr 7:82,754,012...83,164,161
Ensembl chr 7:82,754,012...83,162,930
JBrowse link
G PLAA phospholipase A2 activating protein involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:26,903,372...26,947,267
Ensembl chr 9:26,903,372...26,947,242
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:48,973,723...49,002,264
Ensembl chr  X:48,973,720...49,002,264
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438074|PMID:22536397) Ensembl
MGI
PMID:22536397 GO_REF:0000107 MGI:5438074 NCBI chr 6:38,168,451...38,640,541
Ensembl chr 6:38,168,451...38,640,148
JBrowse link
G CALM1 calmodulin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:90,396,502...90,408,268
Ensembl chr14:90,396,502...90,408,268
JBrowse link
G CALM2 calmodulin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:47,160,082...47,176,936
Ensembl chr 2:47,160,083...47,176,921
JBrowse link
G CALM3 calmodulin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:46,601,074...46,610,782
Ensembl chr19:46,601,074...46,610,782
JBrowse link
G DGKQ diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:958,887...973,569
Ensembl chr 4:958,887...986,895
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 9:128,203,379...128,255,244
Ensembl chr 9:128,191,655...128,255,248
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:6189511 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr11:85,957,175...86,069,860
Ensembl chr11:85,957,175...86,069,882
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) SynGO PMID:15386003 MGI:3054280 NCBI chr19:3,630,181...3,700,486
Ensembl chr19:3,630,183...3,700,468
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:73,436,433...73,496,024
Ensembl chr10:73,436,433...73,496,024
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr 8:22,441,053...22,541,466
Ensembl chr 8:22,440,819...22,541,142
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IGI (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,946,906...21,111,813
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr15:74,995,562...75,021,495
Ensembl chr15:74,957,219...75,021,495
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr19:4,360,369...4,400,547
Ensembl chr19:4,360,370...4,400,547
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in IEA
ISO
Ensembl
RGD
PMID:16815333 GO_REF:0000107 RGD:13504741 NCBI chr19:49,429,401...49,441,527
Ensembl chr19:49,429,401...49,442,360
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr 6:83,552,885...83,709,403
Ensembl chr 6:83,552,880...83,709,691
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:6189675 NCBI chr11:61,513,714...61,588,404
Ensembl chr11:61,513,714...61,581,148
JBrowse link
G VAMP4 vesicle associated membrane protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:171,700,160...171,742,844
Ensembl chr 1:171,700,160...171,742,074
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18666
    regulation of biological process 12682
      regulation of localization 3108
        regulation of transport 2059
          regulation of synaptic vesicle recycling 36
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 16
            regulation of recycling endosome localization within postsynapse 1
            regulation of synaptic vesicle endocytosis + 26
Path 2
Term Annotations click to browse term
  biological_process 18666
    localization 7259
      establishment of localization 5646
        transport 5491
          vesicle-mediated transport 2325
            vesicle-mediated transport in synapse 276
              synaptic vesicle cycle 247
                synaptic vesicle recycling 91
                  regulation of synaptic vesicle recycling 36
                    negative regulation of synaptic vesicle recycling + 3
                    positive regulation of synaptic vesicle recycling + 16
                    regulation of recycling endosome localization within postsynapse 1
                    regulation of synaptic vesicle endocytosis + 26
paths to the root