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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic vesicle recycling
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Accession:GO:1903421 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.
Comment:An example of this is mouse LRRK2 (Q5S006) in PMID:21307259 inferred from mutant phenotype
Synonyms:narrow_synonym: regulation of kiss-and-run synaptic vesicle recycling;   regulation of kiss-and-stay synaptic vesicle recycling


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regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAMP2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 5:32,975,372...32,977,967 JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 7:41,910,102...41,929,020
Ensembl chr 7:41,912,920...41,929,617
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chr 3:32,096,471...32,170,107
Ensembl chr 3:32,097,037...32,187,781
JBrowse link
G STX1B syntaxin 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) UniProt PMID:33478937 MGI:6694370 NCBI chr18:136,338...353,974
Ensembl chr18:135,690...352,871
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chr34:17,071,199...17,080,445
Ensembl chr34:17,071,235...17,080,445
JBrowse link
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MFF mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr25:40,111,860...40,142,246
Ensembl chr25:40,111,894...40,141,776
JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chr25:34,732,268...34,839,743
Ensembl chr25:34,725,226...34,838,994
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chr20:55,279,622...55,311,579
Ensembl chr20:55,279,621...55,311,536
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G TOR1A torsin family 1 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:54,017,895...54,027,049
Ensembl chr 9:54,017,952...54,026,680
JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chr18:22,385,102...22,701,944
Ensembl chr18:22,385,100...22,706,793
JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,121,423...45,159,093
Ensembl chr11:45,121,588...45,159,098
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:42,121,646...42,145,330
Ensembl chr  X:42,121,301...42,145,218
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438074|PMID:22536397) Ensembl
MGI
PMID:22536397 GO_REF:0000107 MGI:5438074 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017
JBrowse link
G CALM1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
JBrowse link
G CALM2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457
JBrowse link
G CALM3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
JBrowse link
G DGKQ diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,544,350...91,554,494
Ensembl chr 3:91,544,219...91,554,565
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) SynGO PMID:15386003 MGI:3054280 NCBI chr20:55,751,055...55,801,740
Ensembl chr20:55,751,158...55,799,160
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:23,976,023...24,028,139
Ensembl chr 4:23,977,317...24,028,153
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr25:34,732,268...34,839,743
Ensembl chr25:34,725,226...34,838,994
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr30:38,007,967...38,029,541
Ensembl chr30:38,008,035...38,030,881
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr20:55,279,622...55,311,579
Ensembl chr20:55,279,621...55,311,536
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:6189675 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link
G VAMP4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chr 7:27,278,200...27,303,499
Ensembl chr 7:27,278,231...27,302,225
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16215
    regulation of biological process 11036
      regulation of localization 2907
        regulation of transport 1885
          regulation of synaptic vesicle recycling 33
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 16
            regulation of recycling endosome localization within postsynapse 1
            regulation of synaptic vesicle endocytosis + 26
Path 2
Term Annotations click to browse term
  biological_process 16215
    localization 6043
      establishment of localization 4494
        transport 4330
          vesicle-mediated transport 1479
            vesicle-mediated transport in synapse 264
              synaptic vesicle cycle 235
                synaptic vesicle recycling 82
                  regulation of synaptic vesicle recycling 33
                    negative regulation of synaptic vesicle recycling + 3
                    positive regulation of synaptic vesicle recycling + 16
                    regulation of recycling endosome localization within postsynapse 1
                    regulation of synaptic vesicle endocytosis + 26
paths to the root