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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of synaptic vesicle recycling
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Accession:GO:1903421 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of synaptic vesicle recycling.
Comment:An example of this is mouse LRRK2 (Q5S006) in PMID:21307259 inferred from mutant phenotype
Synonyms:narrow_synonym: regulation of kiss-and-run synaptic vesicle recycling;   regulation of kiss-and-stay synaptic vesicle recycling


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regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAMP2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chr17:43,495,464...43,499,348
Ensembl chr17:48,228,253...48,231,948
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 Ensembl chr15:20,462,811...20,573,684 JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:5603022 NCBI chr16:23,956,426...23,979,646
Ensembl chr16:31,356,907...31,378,870
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) UniProt PMID:33478937 MGI:6694370 NCBI chr 7:48,812,624...49,288,605
Ensembl chr 7:48,920,381...49,393,235
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chr 3:181,210,045...181,219,327
Ensembl chr 3:189,692,898...189,702,261
JBrowse link
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MFF mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr2B:114,569,893...114,602,158
Ensembl chr2B:233,381,466...233,413,778
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:19628693
(MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chr 3:170,416,885...171,333,094
Ensembl chr 3:178,810,253...179,503,756
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chr 8:21,690,598...21,791,335
Ensembl chr 8:18,629,261...18,729,995
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G TOR1A torsin family 1 member A involved_in ISO (PMID:21102408) UniProt PMID:21102408 NCBI chr 9:100,940,554...100,951,726 JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chr 1:147,339,773...147,916,513
Ensembl chr 1:151,049,346...151,615,808
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chr 7:74,714,364...75,126,518 JBrowse link
G PLAA phospholipase A2 activating protein involved_in ISO (MGI:5883825|PMID:28413018) UniProt PMID:28413018 MGI:5883825 NCBI chr 9:26,749,607...26,793,580
Ensembl chr 9:27,357,437...27,401,103
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 involved_in ISO PMID:20098723 SynGO PMID:20098723 RGD:12050105 NCBI chr  X:41,271,762...41,300,327
Ensembl chr  X:49,128,760...49,157,059
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within ISO (MGI:5438074|PMID:22536397) MGI PMID:22536397 MGI:5438074 NCBI chr 6:37,733,575...38,211,857
Ensembl chr 6:38,928,879...39,358,424
JBrowse link
G CALM1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr14:71,015,099...71,026,322
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G CALM2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr2A:47,274,722...47,290,861
Ensembl chr2A:48,204,518...48,220,697
JBrowse link
G CALM3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr19:43,593,069...43,602,550
Ensembl chr19:52,121,687...52,131,135
JBrowse link
G DGKQ diacylglycerol kinase theta involved_in ISO (MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:5807028 NCBI chr 4:1,075,133...1,090,081
Ensembl chr 4:994,985...1,007,724
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 9:99,324,385...99,376,262
Ensembl chr 9:128,004,508...128,044,690
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) SynGO PMID:25501810 MGI:6189511 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) SynGO PMID:15386003 MGI:3054280 NCBI chr19:2,655,674...2,727,454
Ensembl chr19:3,606,279...3,641,933
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in ISO (MGI:4830393|PMID:20810903) SynGO PMID:20810903 MGI:4830393 NCBI chr10:69,984,241...70,043,352
Ensembl chr10:72,443,051...72,501,752
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr 8:21,690,598...21,791,335
Ensembl chr 8:18,629,261...18,729,995
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr15:53,935,756...53,961,611
Ensembl chr15:73,565,906...73,577,524
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr19:3,383,267...3,423,165
Ensembl chr19:4,329,750...4,340,121
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chr19:46,443,076...46,455,195
Ensembl chr19:55,365,811...55,377,438
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr 6:81,441,792...81,600,505
Ensembl chr 6:84,720,850...84,874,407
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:6189675 NCBI chr11:56,814,694...56,880,439
Ensembl chr11:60,175,403...60,242,375
JBrowse link
G VAMP4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chr 1:147,192,001...147,233,945
Ensembl chr 1:150,903,134...150,944,815
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12612
    regulation of biological process 8687
      regulation of localization 2681
        regulation of transport 1745
          regulation of synaptic vesicle recycling 33
            negative regulation of synaptic vesicle recycling + 3
            positive regulation of synaptic vesicle recycling + 16
            regulation of recycling endosome localization within postsynapse 1
            regulation of synaptic vesicle endocytosis + 26
Path 2
Term Annotations click to browse term
  biological_process 12612
    localization 4984
      establishment of localization 3551
        transport 3385
          vesicle-mediated transport 1160
            vesicle-mediated transport in synapse 242
              synaptic vesicle cycle 210
                synaptic vesicle recycling 68
                  regulation of synaptic vesicle recycling 33
                    negative regulation of synaptic vesicle recycling + 3
                    positive regulation of synaptic vesicle recycling + 16
                    regulation of recycling endosome localization within postsynapse 1
                    regulation of synaptic vesicle endocytosis + 26
paths to the root