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ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of mRNA metabolic process
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Accession:GO:1903313 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of mRNA metabolic process.
Synonyms:exact_synonym: positive regulation of mRNA metabolism;   up regulation of mRNA metabolic process;   up regulation of mRNA metabolism;   upregulation of mRNA metabolic process;   upregulation of mRNA metabolism
 narrow_synonym: activation of mRNA metabolic process;   activation of mRNA metabolism


show annotations for term's descendants           Sort by:
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871 		JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:136,035,464...136,038,524
Ensembl chr 5:142,151,441...142,154,262 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894 		JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846)
(PMID:28275056)		 UniProt
CACAO		 PMID:16126846 PMID:28275056 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820 		JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr 1:865,290...873,575 JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732 		JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:32,745,217...32,824,985
Ensembl chr 3:33,050,997...33,123,910 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556 		JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:43,311,744...43,315,928 JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18625844) Ensembl
MGI		 PMID:18625844 GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:53,231,318...53,291,890
Ensembl chr 3:54,449,980...54,514,267 		JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr12:2,057,985...2,118,615
Ensembl chr12:2,007,406...2,065,141 		JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480 		JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr11:121,119,720...121,159,513
Ensembl chr11:125,028,616...125,068,807 		JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 8:37,465,986...37,479,186
Ensembl chr 8:34,642,938...34,656,142 		JBrowse link
G NOCT nocturnin acts_upstream_of_or_within ISO (PMID:18625844) MGI PMID:18625844 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514 		JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) MGI PMID:18625844 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266 		JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:54,861,349...54,893,279
Ensembl chr11:58,311,235...58,342,561 		JBrowse link
G PATL2 PAT1 homolog 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr15:23,622,330...23,667,962
Ensembl chr15:41,790,682...41,801,825 		JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832 		JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125 		JBrowse link
G AGO3 argonaute RISC catalytic component 3 NOT|involved_in ISO
IEA		 (PMID:15260970) BHF-UCL
GOC		 PMID:15260970 GO_REF:0000108 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190 		JBrowse link
G LOC100977537 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259 		JBrowse link
G MOV10 Mov10 RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820 		JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,725,632...32,753,021
Ensembl chr17:38,003,362...38,030,715 		JBrowse link
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487 		JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (PMID:17452450) MGI PMID:17452450 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307 		JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO RGD PMID:26682942 RGD:329961560 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137 		JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231 		JBrowse link
G FXR1 FMR1 autosomal homolog 1 involved_in ISO (PMID:30067974) UniProt PMID:30067974 NCBI chr 3:177,948,040...178,012,705 JBrowse link
G FXR2 FMR1 autosomal homolog 2 involved_in ISO (MGI:5141571|PMID:21658585) UniProt PMID:21658585 MGI:5141571 NCBI chr17:7,622,855...7,646,340
Ensembl chr17:7,609,736...7,631,758 		JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549 		JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977 		JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392 		JBrowse link
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906 		JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:30,205,584...30,341,979
Ensembl chr 1:31,230,268...31,364,348 		JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512 		JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086 		JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986 		JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IEA UniProt GO_REF:0000117 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893 		JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745 		JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769 		JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein F2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533 		JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:59,701,341...59,742,865
Ensembl chr 8:61,375,832...61,413,911 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase 16, RNA N6-adenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277 		JBrowse link
G QKI QKI, KH domain containing RNA binding involved_in ISO (MGI:6384430|PMID:31868295) UniProt PMID:31868295 MGI:6384430 NCBI chr 6:161,361,413...161,523,414 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:87,796,518...87,837,602
Ensembl chr 1:122,849,903...122,890,959 		JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833 		JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031 		JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614 		JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,815,814...66,848,051
Ensembl chr 5:71,867,224...71,913,384 		JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:11051545), (PMID:19029303) ComplexPortal PMID:11051545 PMID:19029303 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G YBX1 Y-box binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:7,032,809...7,077,080
Ensembl chr 5:6,724,029...6,752,159 		JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665 		JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683 		JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC7 exosome component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:44,877,339...44,913,510
Ensembl chr 3:45,932,343...46,023,269 		JBrowse link
G EXOSC8 exosome component 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:18,208,074...18,217,426
Ensembl chr13:36,638,406...36,647,273 		JBrowse link
G EXOSC9 exosome component 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288 		JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326 		JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472 		JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (PMID:17452450) MGI PMID:17452450 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307 		JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA UniProt GO_REF:0000117 NCBI chr11:121,119,720...121,159,513
Ensembl chr11:125,028,616...125,068,807 		JBrowse link
G PABPN1L PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (PMID:32558204) MGI PMID:32558204 NCBI chr16:69,579,421...69,583,803
Ensembl chr16:89,234,156...89,237,595 		JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA UniProt GO_REF:0000104 NCBI chr12:32,581,728...32,598,445
Ensembl chr12:32,835,235...32,853,645 		JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA UniProt GO_REF:0000104 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266 		JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
G RC3H2 ring finger and CCCH-type domains 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:93,975,164...94,031,516
Ensembl chr 9:122,313,791...122,365,102 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814898) Ensembl
MGI		 PMID:15814898 GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814898) Ensembl
MGI		 PMID:15814898 GO_REF:0000107 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814898) Ensembl
MGI		 PMID:15814898 GO_REF:0000107 NCBI chr2A:43,311,744...43,315,928 JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT2 CCR4-NOT transcription complex subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:67,753,703...67,865,375
Ensembl chr12:70,520,722...70,633,149 		JBrowse link
G CNOT3 CCR4-NOT transcription complex subunit 3 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chr19:51,071,167...51,089,289
Ensembl chr19:59,913,040...59,931,108 		JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997 		JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (PMID:18625844) MGI PMID:18625844 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G MLH1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11337385) Ensembl
MGI		 PMID:11337385 GO_REF:0000107 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801 		JBrowse link
G PAN2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr12:32,581,728...32,598,445
Ensembl chr12:32,835,235...32,853,645 		JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266 		JBrowse link
G PARN poly(A)-specific ribonuclease involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18337750) TreeGrafter
MGI		 PMID:18337750 GO_REF:0000118 NCBI chr16:13,363,879...13,556,054
Ensembl chr16:14,787,881...14,977,786 		JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:157,682,286...157,707,632
Ensembl chr 6:162,694,724...162,716,700 		JBrowse link
G SAMD4A sterile alpha motif domain containing 4A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:35,153,002...35,380,018
Ensembl chr14:53,566,636...53,654,151 		JBrowse link
G SAMD4B sterile alpha motif domain containing 4B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:36,440,769...36,483,953
Ensembl chr19:45,002,848...45,031,649 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814898) Ensembl
MGI		 PMID:15814898 GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IEA UniProt GO_REF:0000104 NCBI chr2B:119,187,659...119,558,347
Ensembl chr2B:238,030,931...238,347,570 		JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893 		JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745 		JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
positive regulation of mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1 cyclin B1 ISO c-mos polyadenylation RGD PMID:15291744 RGD:1578405 NCBI chr 5:44,826,103...44,836,832
Ensembl chr 5:46,394,362...46,405,332 		JBrowse link
G CDC73 cell division cycle 73 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:168,581,730...168,710,915
Ensembl chr 1:172,875,365...173,004,934 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871 		JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624 		JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:194,277,280...194,284,456
Ensembl chr 3:204,214,282...204,221,294 		JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293 		JBrowse link
G GTPBP1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr22:19,621,159...19,648,848
Ensembl chr22:37,438,626...37,462,933 		JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977 		JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820 		JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:737213 GO_REF:0000107 RGD:11554176 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326 		JBrowse link
G PRR5L proline rich 5 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:36,269,291...36,438,954
Ensembl chr11:36,223,385...36,311,659 		JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,163,280...1,180,212
Ensembl chr14:19,216,993...19,233,797 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556 		JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr2A:43,311,744...43,315,928 JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr17:15,622,030...15,624,812
Ensembl chr17:15,843,190...15,846,044 		JBrowse link
G EXOSC10 exosome component 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224 		JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16789828) Ensembl
MGI		 PMID:16789828 GO_REF:0000107 NCBI chr13:95,349,449...95,373,984
Ensembl chr13:114,415,784...114,438,692 		JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) MGI PMID:16789828 NCBI chr  X:108,897,140...108,916,620
Ensembl chr  X:119,292,231...119,311,632 		JBrowse link
positive regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO RGD PMID:9792439 RGD:10041038 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203 		JBrowse link
positive regulation of mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADARB1 adenosine deaminase RNA specific B1 ISO RGD PMID:10331393 RGD:10450893 NCBI chr21:31,374,841...31,532,721
Ensembl chr21:44,715,931...44,815,748 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF3 CUGBP Elav-like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:127,060,330...127,075,106
Ensembl chr 1:130,701,452...130,718,578 		JBrowse link
G CELF4 CUGBP Elav-like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:30,495,149...30,818,358
Ensembl chr18:34,068,123...34,374,372 		JBrowse link
G CIRBP cold inducible RNA binding protein involved_in IEA TreeGrafter GO_REF:0000118
G DAZAP1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 Ensembl chr19:1,391,764...1,408,254 JBrowse link
G HMX2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr10:119,700,416...119,708,444 JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G LMNTD2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr11:559,779...564,584
Ensembl chr11:588,816...594,794 		JBrowse link
G LOC100988043 eukaryotic initiation factor 4A-III acts_upstream_of_or_within ISO (PMID:18480465) MGI PMID:18480465 NCBI chr17:74,221,793...74,233,738 JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624 		JBrowse link
G NCL nucleolin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2B:118,703,148...118,712,893
Ensembl chr2B:237,490,378...237,500,193 		JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,553,379...3,669,367
Ensembl chr11:3,661,568...3,767,443 		JBrowse link
G OBI1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr13:59,840,406...59,884,765
Ensembl chr13:78,874,466...78,918,446 		JBrowse link
G PRDX6 peroxiredoxin 6 involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chr 1:148,988,836...149,000,345 JBrowse link
G PRPF19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18480465) Ensembl
MGI		 PMID:18480465 GO_REF:0000107 NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828 		JBrowse link
G RBM3 RNA binding motif protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:40,872,745...40,876,611
Ensembl chr  X:48,734,777...48,738,077 		JBrowse link
G RBMX RNA binding motif protein X-linked involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:125,997,989...126,009,525
Ensembl chr  X:136,264,406...136,275,360 		JBrowse link
G RBMXL1 RBMX like 1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 1:91,695,452...91,708,711 JBrowse link
G SF3B4 splicing factor 3b subunit 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) TreeGrafter
MGI		 PMID:23636947 GO_REF:0000118 NCBI chr 1:125,268,113...125,273,405
Ensembl chr 1:128,924,317...128,929,610 		JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr12:32,677,330...32,685,316
Ensembl chr12:32,929,033...32,936,158 		JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:58,262,126...58,271,829
Ensembl chr14:77,462,875...77,516,882 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23636947) Ensembl
MGI		 PMID:23636947 GO_REF:0000107 NCBI chr19:46,094,679...46,118,022
Ensembl chr19:55,021,402...55,046,281 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:12840015) UniProt PMID:12840015 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315 		JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:23,170,078...23,184,030
Ensembl chr 1:24,149,428...24,165,057 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:70,809,931...70,813,191
Ensembl chr17:76,375,957...76,379,759 		JBrowse link
G STH saitohin involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chr17:11,475,944...11,479,303 JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355 		JBrowse link
G TRA2A transformer 2 alpha homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22194695) TreeGrafter
MGI		 PMID:22194695 GO_REF:0000118 NCBI chr 7:24,184,844...24,213,889
Ensembl chr 7:23,791,479...23,820,124 		JBrowse link
G TRA2B transformer 2 beta homolog involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22194695) Ensembl
MGI
TreeGrafter		 PMID:22194695 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:182,942,623...182,963,938
Ensembl chr 3:191,414,777...191,436,103 		JBrowse link
G ZFP64 ZFP64 zinc finger protein acts_upstream_of_or_within ISO (PMID:23636947) MGI PMID:23636947 NCBI chr20:48,430,392...48,535,618
Ensembl chr20:49,516,786...49,653,435 		JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125 		JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871 		JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr10:115,603,040...115,607,245 JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:42,922,655...42,924,679
Ensembl chr19:51,459,529...51,459,945 		JBrowse link
G NANOS3 nanos C2HC-type zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:13,427,661...13,443,218
Ensembl chr19:14,170,699...14,173,013 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614 		JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914 		JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511 		JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805 		JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr2A:43,311,744...43,315,928 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125 		JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18337750) MGI
Ensembl		 PMID:18337750 GO_REF:0000107 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404 		JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089 		JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614 		JBrowse link
G POLR2G RNA polymerase II subunit G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:58,116,833...58,122,031
Ensembl chr11:61,470,866...61,476,073 		JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr16:24,966,474...25,064,998 JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914 		JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511 		JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683 		JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390 		JBrowse link
regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAPRIN1 cell cycle associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,023,981...34,079,335
Ensembl chr11:33,902,072...33,957,134 		JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402 		JBrowse link
siRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832 		JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125 		JBrowse link
G AGO3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190 		JBrowse link
G LOC100977537 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    metabolic process 10179
      positive regulation of metabolic process 3566
        positive regulation of macromolecule metabolic process 3243
          positive regulation of RNA metabolic process 1766
            positive regulation of mRNA metabolic process 135
              positive regulation of mRNA catabolic process + 97
              positive regulation of mRNA modification 1
              positive regulation of mRNA processing + 39
Path 2
Term Annotations click to browse term
  biological_process 16313
    metabolic process 10179
      cellular metabolic process 8945
        cellular aromatic compound metabolic process 5217
          nucleobase-containing compound metabolic process 4994
            nucleic acid metabolic process 4498
              RNA metabolic process 3942
                regulation of RNA metabolic process 3209
                  positive regulation of RNA metabolic process 1766
                    positive regulation of mRNA metabolic process 135
                      positive regulation of mRNA catabolic process + 97
                      positive regulation of mRNA modification 1
                      positive regulation of mRNA processing + 39
paths to the root