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ONTOLOGY REPORT - ANNOTATIONS

Term:negative regulation of mRNA metabolic process
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Accession:GO:1903312 term browser browse the term
Definition:Any process that stops, prevents or reduces the frequency, rate or extent of mRNA metabolic process.
Synonyms:exact_synonym: down regulation of mRNA metabolic process;   down regulation of mRNA metabolism;   downregulation of mRNA metabolic process;   downregulation of mRNA metabolism;   negative regulation of mRNA metabolism
 narrow_synonym: inhibition of mRNA metabolic process;   inhibition of mRNA metabolism

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3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO
IBA		 (PMID:22547059)
PMID:21873635		 RGD PMID:22547059, PMID:21873635 RGD:13792537 NCBI chr13:109,505,021...109,520,976
Ensembl chr13:109,505,697...109,520,419 		JBrowse link
G Boll boule homolog, RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660 		JBrowse link
G Dazl deleted in azoospermia-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISS
ISO		 GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)		 UniProt
RGD		 PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS		 (PMID:12034726)
GO_REF:0000024		 RGD
UniProt		 PMID:12034726 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353 		JBrowse link
G LOC108348134 protein boule-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:64,447,890...64,573,812
Ensembl chr 9:64,480,031...64,573,660 		JBrowse link
G LOC681410 hypothetical protein LOC681410 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,909,166...6,912,145
Ensembl chr17:6,909,728...6,910,630 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718 		JBrowse link
G Rbm10 RNA binding motif protein 10 IEA
ISO		 GO_REF:0000107
(MGI:4367529|PMID:19508861)		 Ensembl
RGD		 PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978 		JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475 		JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048 		JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224 		JBrowse link
G Zfp36 zinc finger protein 36 ISO
ISS		 (PMID:15014438)
GO_REF:0000024		 RGD
UniProt		 PMID:15014438 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:19029303)		 Ensembl
RGD		 PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:19029303)		 Ensembl
RGD		 PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342 		JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS		 (PMID:19029303)
GO_REF:0000024		 RGD
UniProt		 PMID:19029303 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480 		JBrowse link
G Axin2 axin 2 ISO
IEA		 (PMID:17072303)
GO_REF:0000107		 RGD
Ensembl		 PMID:17072303 GO_REF:0000107 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642 		JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS		 (PMID:11574538)
GO_REF:0000024		 RGD
UniProt		 PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022 		JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:3589208 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212 		JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) RGD PMID:15766563 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO
IEA		 (PMID:24335285), (PMID:32354837)
GO_REF:0000107		 RGD
Ensembl		 PMID:24335285 PMID:32354837 GO_REF:0000107 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO
ISS		 (PMID:19029303), (PMID:21613615), (PMID:31358969)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615), (MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837)
GO_REF:0000024		 RGD
UniProt		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 GO_REF:0000024 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432 		JBrowse link
G Fus FUS RNA binding protein ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:199,412,805...199,426,705
Ensembl chr 1:199,412,834...199,426,702 		JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
ISS
IEA		 (PMID:12358785)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:15192077 RGD:1357938 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO MGI:2179724 (MGI:2158083|PMID:11741878) RGD PMID:11741878 MGI:2158083 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110 		JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO
IBA		 (MGI:5770021|PMID:26742488)
PMID:21873635		 RGD PMID:26742488, PMID:21873635 MGI:5770021, RGD:13792537 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967 		JBrowse link
G Noct nocturnin ISS
ISO		 GO_REF:0000024
(MGI:5308514|PMID:22073225)		 UniProt
RGD		 PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869 		JBrowse link
G Qk quaking IMP RGD PMID:16855020 RGD:10045995 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876 		JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:5644240|PMID:25397698) RGD PMID:25397698 MGI:5644240 NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 IEA
ISO		 GO_REF:0000107
MGI:1857755 (MGI:85148|PMID:9009318)		 Ensembl
RGD		 PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:92,935,474...92,942,267
Ensembl chr 8:92,937,739...92,942,076 		JBrowse link
G Tent5b terminal nucleotidyltransferase 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:151,692,068...151,699,381
Ensembl chr 5:151,692,108...151,700,246 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISS
IBA
ISO		 GO_REF:0000024
PMID:21873635
(MGI:5926094|PMID:28931820)
(PMID:28931820)		 UniProt
RGD		 PMID:28931820, PMID:21873635 GO_REF:0000024 MGI:5926094, RGD:13792537 NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562 		JBrowse link
G Tent5d terminal nucleotidyltransferase 5D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,911,641...78,994,467
Ensembl chr  X:78,991,223...78,992,735 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO
ISS		 (PMID:18794151)
GO_REF:0000024		 RGD
UniProt		 PMID:18794151 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
G Vip vasoactive intestinal peptide ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582 		JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS		 (PMID:31358969)
GO_REF:0000024		 RGD
UniProt		 PMID:31358969 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475 		JBrowse link
G Ybx2 Y box binding protein 2 ISO MGI:3576937 (MGI:3696301|PMID:17035640) RGD PMID:17035640 MGI:3696301 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase like 16 ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO
IEA		 (PMID:32354837)
GO_REF:0000107		 RGD
Ensembl		 PMID:32354837 GO_REF:0000107 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 IEA
ISO		 GO_REF:0000107
(PMID:25225333)		 Ensembl
RGD		 PMID:25225333 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314 		JBrowse link
G Pkp1 plakophilin 1 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:52,705,174...52,753,089
Ensembl chr13:52,705,174...52,752,997 		JBrowse link
G Pkp3 plakophilin 3 ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:213,884,795...213,897,783
Ensembl chr 1:213,886,775...213,897,783 		JBrowse link
negative regulation of mRNA modification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag4 BAG cochaperone 4 IMP RGD PMID:14559896 RGD:2325853 NCBI chr16:71,057,709...71,075,874
Ensembl chr16:71,058,022...71,075,320 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C IDA RGD PMID:9792439 RGD:10041038 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IMP RGD PMID:11134005 RGD:10059415 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342 		JBrowse link
negative regulation of mRNA polyadenylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 7:140,215,052...140,245,958
Ensembl chr 7:140,219,551...140,245,723 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 3:11,742,269...11,747,117
Ensembl chr 3:11,742,266...11,747,113 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165 		JBrowse link
G Nelfe negative elongation factor complex member E ISO (PMID:19575011) RGD PMID:19575011 NCBI chr20:4,530,328...4,536,085
Ensembl chr20:4,530,342...4,536,209 		JBrowse link
G Rnf20 ring finger protein 20 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 5:64,892,996...64,920,397
Ensembl chr 5:64,892,802...64,920,390 		JBrowse link
G Rnf40 ring finger protein 40 ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:199,037,472...199,052,823
Ensembl chr 1:199,037,544...199,052,172 		JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO (PMID:19575011) RGD PMID:19575011 NCBI chr 1:85,437,780...85,466,854
Ensembl chr 1:85,437,780...85,466,854 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 IBA
IEA		 PMID:21873635
GO_REF:0000002		 InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 6:122,729,834...122,767,462
Ensembl chr 6:122,729,874...122,767,462 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:33,288,369...33,333,256
Ensembl chr15:33,288,374...33,333,417 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr17:69,441,253...69,460,334
Ensembl chr17:69,441,223...69,460,321 		JBrowse link
G C1qbp complement C1q binding protein ISO
IBA
ISS		 (PMID:10022843)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:10022843, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ISO (MGI:5317240|PMID:21470964) RGD PMID:21470964 MGI:5317240 NCBI chr11:34,858,339...34,958,733
Ensembl chr11:34,865,532...34,956,536 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO
IEA		 (MGI:3814796|PMID:18480465)
GO_REF:0000107		 RGD
Ensembl		 PMID:18480465 GO_REF:0000107 MGI:3814796 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO
IEA		 (MGI:5532638|PMID:23636947)
GO_REF:0000107		 RGD
Ensembl		 PMID:23636947 GO_REF:0000107 MGI:5532638 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776 		JBrowse link
G Npm1 nucleophosmin 1 ISO (MGI:3615094|PMID:16376875) RGD PMID:16376875 MGI:3615094 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 ISO
IBA		 (MGI:5532638|PMID:23636947)
PMID:21873635		 RGD PMID:23636947, PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 8:115,154,848...115,165,706
Ensembl chr 8:115,155,470...115,165,706 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO
IBA
ISS		 (PMID:15009664)
PMID:21873635
(MGI:5532638|PMID:23636947), (MGI:6271441|PMID:17679093)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 PMID:17679093 PMID:23636947, PMID:21873635 GO_REF:0000024 MGI:5532638 MGI:6271441, RGD:13792537 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 ISO
IBA		 (MGI:5532638|PMID:23636947)
PMID:21873635		 RGD PMID:23636947, PMID:21873635 MGI:5532638, RGD:13792537 NCBI chr 5:76,670,074...76,756,196
Ensembl chr 5:76,673,990...76,756,147 		JBrowse link
G Rbm10 RNA binding motif protein 10 IEA
ISO		 GO_REF:0000107
(MGI:5532638|PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 MGI:5532638 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978 		JBrowse link
G Rbm42 RNA binding motif protein 42 ISO (MGI:5532638|PMID:23636947) RGD PMID:23636947 MGI:5532638 NCBI chr 1:89,099,296...89,109,248
Ensembl chr 1:89,099,277...89,109,230 		JBrowse link
G Rbmxl1 RBMX like 1 IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 ISO
ISS		 (PMID:12665594)
GO_REF:0000024		 RGD
UniProt		 PMID:12665594 GO_REF:0000024 NCBI chr10:13,786,339...13,796,720
Ensembl chr10:13,786,459...13,796,717 		JBrowse link
G Sap18 Sin3A associated protein 18 ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:38,069,320...38,073,625
Ensembl chr15:38,069,320...38,073,622 		JBrowse link
G Sfswap splicing factor SWAP IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054 		JBrowse link
G Smptb polypyrimidine tract-binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:17,484,839...17,486,721
Ensembl chr  X:17,484,839...17,486,721 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (PMID:11684676)
(MGI:3688015|PMID:11684676)		 RGD PMID:11684676 MGI:3688015 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801 		JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:150,032,999...150,060,769
Ensembl chr 5:150,032,999...150,060,765 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:2,879,312...2,886,505
Ensembl chr 6:2,880,518...2,886,465 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 ISO
ISS		 (PMID:15009664)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 GO_REF:0000024 NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022 		JBrowse link
G Tra2b transformer 2 beta homolog ISO (MGI:5304203|PMID:22194695) RGD PMID:22194695 MGI:5304203 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx34 DExH-box helicase 34 ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:78,069,260...78,112,488
Ensembl chr 1:78,090,044...78,112,488 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:38,474,773...38,777,146
Ensembl chr 6:38,474,804...38,777,806 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 ISO
ISS		 (PMID:18447585)
GO_REF:0000024		 RGD
UniProt		 PMID:18447585 GO_REF:0000024 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268 		JBrowse link
G Secisbp2 SECIS binding protein 2 IEA
ISO		 GO_REF:0000107
MGI:4433050 (MGI:5582859|PMID:24274065)		 Ensembl
RGD		 PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr17:13,555,348...13,586,595
Ensembl chr17:13,555,349...13,586,554 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812 		JBrowse link
G Tob1 transducer of ErbB-2.1 IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:18377426)		 Ensembl
UniProt
RGD		 PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS		 (PMID:18218628)
GO_REF:0000024		 RGD
UniProt		 PMID:18218628 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838 		JBrowse link
G Larp4b La ribonucleoprotein 4B ISO
IEA		 (PMID:26001795)
GO_REF:0000107		 RGD
Ensembl		 PMID:26001795 GO_REF:0000107 NCBI chr17:63,236,007...63,317,298
Ensembl chr17:63,265,407...63,314,019 		JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      negative regulation of metabolic process 3257
        negative regulation of macromolecule metabolic process 2990
          negative regulation of RNA metabolic process 1448
            negative regulation of mRNA metabolic process 94
              miRNA-mediated inhibition of transcription by RNA polymerase II 0
              negative regulation of mRNA catabolic process + 61
              negative regulation of mRNA cleavage 0
              negative regulation of mRNA modification 3
              negative regulation of mRNA processing + 34
Path 2
Term Annotations click to browse term
  biological_process 20044
    metabolic process 12101
      cellular metabolic process 11040
        cellular aromatic compound metabolic process 5710
          nucleobase-containing compound metabolic process 5498
            nucleic acid metabolic process 4988
              RNA metabolic process 4473
                regulation of RNA metabolic process 3611
                  negative regulation of RNA metabolic process 1448
                    negative regulation of mRNA metabolic process 94
                      miRNA-mediated inhibition of transcription by RNA polymerase II 0
                      negative regulation of mRNA catabolic process + 61
                      negative regulation of mRNA cleavage 0
                      negative regulation of mRNA modification 3
                      negative regulation of mRNA processing + 34
paths to the root