Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of mRNA metabolic process
go back to main search page
Accession:GO:1903311 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of mRNA metabolic process.
Synonyms:exact_synonym: regulation of mRNA metabolism


show annotations for term's descendants           Sort by:
regulation of mRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qki QKI, KH domain containing RNA binding involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS		 (PMID:26489465)
GO_REF:0000024		 RGD
UniProt		 PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS		 (PMID:16126846), (PMID:28275056)
GO_REF:0000024		 RGD
UniProt		 PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083 		JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO
IBA		 (PMID:29180010)
GO_REF:0000033
(MGI:6105829|PMID:27616329)		 RGD
GO_Central		 PMID:27616329 PMID:29180010 GO_REF:0000033 MGI:6105829 NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482)
(PMID:26000482)		 RGD PMID:26000482 MGI:5706859 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:19322177), (PMID:23185455), (PMID:26000482), (PMID:26134560)
GO_REF:0000033
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560)
(PMID:19909337)		 UniProt
RGD
GO_Central		 PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 GO_REF:0000024 GO_REF:0000033 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO
IBA		 (MGI:5707103|PMID:26134560)
GO_REF:0000033		 RGD
GO_Central		 PMID:26134560 GO_REF:0000033 MGI:5707103 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS		 (PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
GO_REF:0000104
GO_REF:0000024
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233), (MGI:5795824|PMID:17288565)		 RGD
UniProt		 PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000104 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20622884), (PMID:22701344), (PMID:24700863), (PMID:24733888), (PMID:27102483)
(MGI:4818820|PMID:20622884), (MGI:5779430|PMID:27102483), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)		 UniProt
RGD		 PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)		 RGD PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA		 (PMID:22547059)
GO_REF:0000033		 RGD
GO_Central		 PMID:22547059 GO_REF:0000033 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493 		JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916 		JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:10,695,593...10,712,330
Ensembl chr 9:10,695,592...10,712,323 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)		 UniProt
RGD		 PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:12034726)
GO_REF:0000024		 RGD
UniProt		 PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657)
(PMID:12456657)		 RGD PMID:12456657 MGI:5306322 NCBI chr17:6,507,728...6,510,385
Ensembl chr17:6,507,275...6,509,375 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415 		JBrowse link
G Nicol1 NELL2 interacting cell ontogeny regulator 1 involved_in ISO (PMID:38625739) UniProt
RGD		 PMID:38625739 NCBI chr14:76,768,145...76,769,661
Ensembl chr14:76,768,146...76,773,575 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19508861)		 Ensembl
RGD		 PMID:19508861 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127)
(MGI:6859910|PMID:29844590)		 RGD PMID:29844590 PMID:34160127 MGI:6859910 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431 		JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
ISS		 (PMID:15014438)
GO_REF:0000024		 RGD
UniProt		 PMID:15014438 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
(PMID:19029303)		 Ensembl
RGD		 PMID:19029303 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:19029303), (PMID:29476152)		 UniProt
GO_Central
RGD		 PMID:19029303 PMID:29476152 GO_REF:0000024 GO_REF:0000033 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Igf2bp2 insulin-like growth factor 2 mRNA binding protein 2 involved_in ISO
IBA		 (PMID:29476152)
GO_REF:0000033		 RGD
GO_Central		 PMID:29476152 GO_REF:0000033 NCBI chr11:78,874,402...78,974,392
Ensembl chr11:78,874,414...78,974,377 		JBrowse link
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 involved_in ISO
IBA		 (PMID:29476152)
GO_REF:0000033		 RGD
GO_Central		 PMID:29476152 GO_REF:0000033 NCBI chr 4:78,060,494...78,195,007
Ensembl chr 4:78,060,494...78,194,865 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
IEA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:11051545 PMID:19029303 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19029303)		 UniProt
Ensembl
RGD		 PMID:19029303 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in
acts_upstream_of_or_within		 ISO (PMID:31439799)
MGI:109382 (PMID:18625844)		 RGD PMID:18625844 PMID:31439799 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:5,656,960...5,702,151
Ensembl chr16:5,656,773...5,702,140 		JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557 		JBrowse link
G Dcps decapping enzyme, scavenger involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000104		 InterPro
GO_Central
UniProt		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 NCBI chr 8:33,468,669...33,524,407
Ensembl chr 8:33,415,671...33,524,389 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852 		JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO MGI:1298230 (PMID:18625844) RGD PMID:18625844 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) RGD PMID:18625844 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204 		JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO
IBA
IEA
ISS		 (PMID:20584987), (PMID:20852261)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024		 RGD
GO_Central
InterPro
UniProt		 PMID:20584987 PMID:20852261 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857 		JBrowse link
G Patl2 PAT1 homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253 		JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:33,415,666...33,465,319
Ensembl chr 8:33,415,671...33,524,389 		JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
ISS
IEA		 (PMID:15260970), (PMID:17524464), (PMID:18771919)
(PMID:16357216)
(MGI:5616320|PMID:16357216)
GO_REF:0000024
GO_REF:0000104		 RGD
UniProt		 PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 GO_REF:0000024 GO_REF:0000104 MGI:5616320 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230 		JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632 		JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA
ISS		 (PMID:20065043)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20065043 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO (PMID:20065043) RGD PMID:20065043 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730 		JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir100 microRNA 100 involved_in ISO (PMID:22684006) RGD PMID:22684006 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304 		JBrowse link
G Mir106a microRNA 106a involved_in ISO (PMID:22912877), (PMID:26265888), (PMID:27325313) RGD PMID:22912877 PMID:26265888 PMID:27325313 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661 		JBrowse link
G Mir106b microRNA 106b involved_in ISO (PMID:27325313) RGD PMID:27325313 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425 		JBrowse link
G Mir125a microRNA 125a involved_in ISO (PMID:30670152) RGD PMID:30670152 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710 		JBrowse link
G Mir125b1 microRNA 125b-1 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052 		JBrowse link
G Mir125b2 microRNA 125b-2 involved_in ISO (PMID:28214897) RGD PMID:28214897 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530 		JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:33058756) RGD PMID:33058756 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550 		JBrowse link
G Mir130a microRNA 130a involved_in ISO (PMID:30741461) RGD PMID:30741461 NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629 		JBrowse link
G Mir130b microRNA 130b involved_in ISO (PMID:24040078) RGD PMID:24040078 NCBI chr11:83,880,163...83,880,244
Ensembl chr11:83,880,163...83,880,244 		JBrowse link
G Mir133a1 microRNA 133a-1 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir135b microRNA 135b involved_in ISO (PMID:27793001) RGD PMID:27793001 NCBI chr13:43,638,857...43,638,953
Ensembl chr13:43,638,857...43,638,953 		JBrowse link
G Mir137 microRNA 137 involved_in ISO (PMID:23275153) RGD PMID:23275153 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985 		JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:24928442) RGD PMID:24928442 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675 		JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:24558198), (PMID:26572508), (PMID:31168355) RGD PMID:24558198 PMID:26572508 PMID:31168355 NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967 		JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:25323858), (PMID:25704091), (PMID:29883722) RGD PMID:25323858 PMID:25704091 PMID:29883722 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:30779466) RGD PMID:30779466 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610 		JBrowse link
G Mir151 microRNA 151 involved_in ISO (PMID:20305651) RGD PMID:20305651 NCBI chr 7:105,172,377...105,172,473 JBrowse link
G Mir16 microRNA 16 involved_in ISO (PMID:24418124) RGD PMID:24418124 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443 		JBrowse link
G Mir181a2 microRNA 181a-2 involved_in ISO (PMID:22714950), (PMID:25535255) RGD PMID:22714950 PMID:25535255 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961 		JBrowse link
G Mir181b1 microRNA 181b-1 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797 		JBrowse link
G Mir181b2 microRNA 181b-2 involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035 		JBrowse link
G Mir181c microRNA 181c involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628 		JBrowse link
G Mir181d microRNA 181d involved_in ISO (PMID:25535255) RGD PMID:25535255 NCBI chr19:23,983,706...23,983,788
Ensembl chr19:23,983,706...23,983,788 		JBrowse link
G Mir185 microRNA 185 involved_in ISO (PMID:23459944), (PMID:23951060), (PMID:26316588), (PMID:29053187) RGD PMID:23459944 PMID:23951060 PMID:26316588 PMID:29053187 NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795 		JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:28131417), (PMID:29988076), (PMID:34937502) RGD PMID:28131417 PMID:29988076 PMID:34937502 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir190b microRNA 190b involved_in ISO (PMID:32039833) RGD PMID:32039833 NCBI chr 2:175,514,800...175,514,877
Ensembl chr 2:175,514,800...175,514,877 		JBrowse link
G Mir191 microRNA 191 involved_in ISO (PMID:31874245) RGD PMID:31874245 NCBI chr 8:109,264,098...109,264,188 JBrowse link
G Mir192 microRNA 192 involved_in ISO (PMID:28483554) RGD PMID:28483554 NCBI chr 1:203,564,946...203,565,055
Ensembl chr 1:203,564,946...203,565,055 		JBrowse link
G Mir193a microRNA 193a involved_in ISO (PMID:29725386) RGD PMID:29725386 NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454 		JBrowse link
G Mir195 microRNA 195 involved_in ISO (PMID:31921616) RGD PMID:31921616 NCBI chr10:54,951,838...54,951,924
Ensembl chr10:54,951,838...54,951,924 		JBrowse link
G Mir196a microRNA 196a acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509 		JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (PMID:15105502) RGD PMID:15105502 NCBI chr 4:81,330,487...81,330,571
Ensembl chr 4:81,330,487...81,330,571 		JBrowse link
G Mir196c microRNA 196c acts_upstream_of_or_within ISO (PMID:15105502), (PMID:15361871) RGD PMID:15105502 PMID:15361871 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085 		JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:27098600), (PMID:29130787) RGD PMID:27098600 PMID:29130787 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993 		JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:27098600) RGD PMID:27098600 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167 		JBrowse link
G Mir1b microRNA 1b involved_in ISO (PMID:23499676), (PMID:25802280) RGD PMID:23499676 PMID:25802280 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
G Mir200b microRNA 200b involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366 		JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:22522429) RGD PMID:22522429 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir204 microRNA 204 involved_in ISO (PMID:20056717) RGD PMID:20056717 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040 		JBrowse link
G Mir206 microRNA 206 involved_in ISO (PMID:23499676) RGD PMID:23499676 NCBI chr 9:23,094,249...23,094,332
Ensembl chr 9:23,094,249...23,094,332 		JBrowse link
G Mir20a microRNA 20a involved_in ISO (PMID:29653364), (PMID:31368162) RGD PMID:29653364 PMID:31368162 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir20b microRNA 20b involved_in ISO (PMID:32336590) RGD PMID:32336590 NCBI chr  X:132,422,211...132,422,282
Ensembl chr  X:132,422,211...132,422,282 		JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:29944867) RGD PMID:29944867 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454 		JBrowse link
G Mir211 microRNA 211 involved_in ISO (PMID:21109473) RGD PMID:21109473 NCBI chr 1:117,777,539...117,777,644
Ensembl chr 1:117,777,539...117,777,644 		JBrowse link
G Mir212 microRNA 212 involved_in ISO (PMID:26693054) RGD PMID:26693054 NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513 		JBrowse link
G Mir214 microRNA 214 involved_in ISO (PMID:30703347) RGD PMID:30703347 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481 		JBrowse link
G Mir223 microRNA 223 involved_in ISO (PMID:23459944), (PMID:30807577), (PMID:34637033) RGD PMID:23459944 PMID:30807577 PMID:34637033 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996 		JBrowse link
G Mir23a microRNA 23a involved_in ISO (PMID:26400397) RGD PMID:26400397 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:30378100) RGD PMID:30378100 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790 		JBrowse link
G Mir26b microRNA 26b involved_in ISO (PMID:25536365) RGD PMID:25536365 NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680 		JBrowse link
G Mir27a microRNA 27a involved_in ISO (PMID:25915942), (PMID:26400397) RGD PMID:25915942 PMID:26400397 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917 		JBrowse link
G Mir27b microRNA 27b involved_in ISO (PMID:30729664) RGD PMID:30729664 NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529 		JBrowse link
G Mir29b1 microRNA 29b-1 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067 		JBrowse link
G Mir29b2 microRNA 29b-2 involved_in ISO (PMID:26175849) RGD PMID:26175849 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456 		JBrowse link
G Mir30b microRNA 30b involved_in ISO (PMID:23968872) RGD PMID:23968872 NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675 		JBrowse link
G Mir320a microRNA 320a involved_in ISO (PMID:32271402) RGD PMID:32271402 NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473 		JBrowse link
G Mir322 microRNA 322 involved_in ISO (PMID:29130787) RGD PMID:29130787 NCBI chr  X:132,806,594...132,806,688
Ensembl chr  X:132,806,594...132,806,688 		JBrowse link
G Mir326 microRNA 326 involved_in ISO (PMID:24279830) RGD PMID:24279830 NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123 		JBrowse link
G Mir337 microRNA 337 involved_in ISO (PMID:22723956) RGD PMID:22723956 NCBI chr 6:128,538,903...128,538,999
Ensembl chr 6:128,538,902...128,538,998 		JBrowse link
G Mir340-1 microRNA 340-1 involved_in ISO (PMID:28413603) RGD PMID:28413603 NCBI chr10:34,393,568...34,393,665
Ensembl chr10:34,393,568...34,393,665 		JBrowse link
G Mir342 microRNA 342 involved_in ISO (PMID:23951060) RGD PMID:23951060 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367 		JBrowse link
G Mir34b microRNA 34b involved_in ISO (PMID:22336710) RGD PMID:22336710 NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327 		JBrowse link
G Mir3582 microRNA 3582 involved_in ISO (PMID:32205184) RGD PMID:32205184 NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180 		JBrowse link
G Mir365b microRNA 365b involved_in ISO (PMID:30910589) RGD PMID:30910589 NCBI chr10:64,686,255...64,686,340
Ensembl chr10:64,686,252...64,686,351 		JBrowse link
G Mir423 microRNA 423 involved_in ISO (PMID:32264887) RGD PMID:32264887 NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226 		JBrowse link
G Mir486 microRNA 486 involved_in ISO (PMID:25857263) RGD PMID:25857263
G Mir497 microRNA 497 involved_in ISO (PMID:29969696) RGD PMID:29969696 NCBI chr10:54,951,514...54,951,582
Ensembl chr10:54,951,505...54,951,584 		JBrowse link
G Mir544 microRNA 544 involved_in ISO (PMID:27186677) RGD PMID:27186677 NCBI chr 6:128,743,530...128,743,607
Ensembl chr 6:128,743,530...128,743,607 		JBrowse link
G Mir665 microRNA 665 involved_in ISO (PMID:34454184) RGD PMID:34454184 NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533 		JBrowse link
G Mir708 microRNA 708 involved_in ISO (PMID:26932538) RGD PMID:26932538 NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963 		JBrowse link
G Mir9-3 microRNA 9-3 involved_in ISO (PMID:26315535), (PMID:29584810) RGD PMID:26315535 PMID:29584810 NCBI chr 1:133,440,049...133,440,138 JBrowse link
G Mir93 microRNA 93 involved_in ISO (PMID:24606633), (PMID:28797104) RGD PMID:24606633 PMID:28797104 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221 		JBrowse link
G Mir96 microRNA 96 involved_in ISO (PMID:23459944) RGD PMID:23459944 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516 		JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:27860183), (PMID:28251559), (PMID:30195495) RGD PMID:27860183 PMID:28251559 PMID:30195495 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342 		JBrowse link
G Mirlet7a1 microRNA let-7a-1 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867 		JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:29471394) RGD PMID:29471394 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270 		JBrowse link
G Mirlet7c1 microRNA let-7c-1 involved_in ISO (PMID:19841744) RGD PMID:19841744 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265 		JBrowse link
G Mirlet7c2 microRNA let7c-2 involved_in ISO (PMID:17671087), (PMID:30467960) RGD PMID:17671087 PMID:30467960 NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:16289642) RGD PMID:16289642 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083 		JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISS
ISO		 GO_REF:0000024
(PMID:34048572), (PMID:37257451)
(MGI:7441422|PMID:36859428)		 UniProt
RGD		 PMID:34048572 PMID:36859428 PMID:37257451 GO_REF:0000024 MGI:7441422 NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in IDA PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426 		JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within ISO (PMID:17452450) RGD PMID:17452450 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IMP RGD PMID:26682942 RGD:329961560 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase involved_in ISO
IEA
ISS		 (PMID:28002401), (PMID:30197295)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:28002401 PMID:30197295 GO_REF:0000024 GO_REF:0000107 NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:30067974)		 UniProt
Ensembl
RGD		 PMID:30067974 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Fxr1-ps1 FMR1 autosomal homolog 1, pseudogene 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Fxr2 FMR1 autosomal homolog 2 involved_in ISO (MGI:5141571|PMID:21658585) RGD PMID:21658585 MGI:5141571 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) RGD PMID:27157137 NCBI chr 9:88,001,212...88,127,040
Ensembl chr 9:88,001,301...88,125,715 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IMP RGD PMID:15798208 RGD:9854643 NCBI chr 5:148,542,999...148,574,888
Ensembl chr 5:148,543,044...148,574,867 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) RGD PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (MGI:6114846|PMID:29262316) RGD PMID:29262316 MGI:6114846 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692)
(PMID:24394384), (PMID:25456834), (PMID:25569111), (PMID:28637692), (PMID:28792938), (PMID:28965759)		 RGD PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Mir144 microRNA 144 involved_in ISO MGI:3619412|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430 		JBrowse link
G Mir451a microRNA 451a involved_in ISO MGI:2676829|MGI:5562734 (PMID:30971389) RGD PMID:30971389 NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591 		JBrowse link
G Nanos1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:259,897,663...259,901,561
Ensembl chr 1:259,897,939...259,898,730 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128 		JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) RGD PMID:24736845 NCBI chr19:23,978,465...23,988,933
Ensembl chr19:23,985,504...23,988,932 		JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO (MGI:5640888|PMID:25768905)
(PMID:25768905)		 RGD PMID:25768905 MGI:5640888 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO
IEA
ISS		 (PMID:30930054)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30930054 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6271078|PMID:29353861)		 Ensembl
RGD		 PMID:29353861 GO_REF:0000107 MGI:6271078 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861)
(PMID:29353861)		 RGD PMID:29353861 MGI:6271078 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO
IBA		 (PMID:32492408)
(PMID:32943573)
GO_REF:0000033
(MGI:6490006|PMID:32943573)		 RGD
GO_Central		 PMID:32492408 PMID:32943573 GO_REF:0000033 MGI:6490006 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO
IBA		 (PMID:27558897), (PMID:28106072), (PMID:30559377), (PMID:30930054), (PMID:32169943), (PMID:32492408)
(PMID:29855337), (PMID:30065315), (PMID:30150673), (PMID:31959747), (PMID:32943573)
GO_REF:0000033
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747)		 RGD
GO_Central		 PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 More... GO_REF:0000033 MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144 		JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO
IBA		 (PMID:28106072), (PMID:32492408)
(PMID:32943573)
GO_REF:0000033
(MGI:6490006|PMID:32943573)		 RGD
GO_Central		 PMID:28106072 PMID:32492408 PMID:32943573 GO_REF:0000033 MGI:6490006 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606 		JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:15480992) RGD PMID:15480992 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Axin2 axin 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17072303)		 Ensembl
RGD		 PMID:17072303 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:11574538)		 UniProt
RGD		 PMID:11574538 GO_REF:0000024 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22844247) RGD PMID:22844247 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316 		JBrowse link
G E2f1 E2F transcription factor 1 involved_in ISO
IEA		 (PMID:15766563)
GO_REF:0000107		 RGD
Ensembl		 PMID:15766563 GO_REF:0000107 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285 PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:24394384), (PMID:27609837)
(PMID:14976220), (PMID:21613615)
(PMID:21613615)
(PMID:19029303), (PMID:31358969)
(MGI:5559905|PMID:24394384), (MGI:5922838|PMID:27609837)		 UniProt
RGD		 PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... GO_REF:0000024 MGI:5559905 MGI:5922838 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Fus Fus RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:182,576,479...182,590,417
Ensembl chr 1:182,576,545...182,590,414 		JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in ISO
IEA
ISS		 (PMID:12358785)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:12358785 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO MGI:3707541 (PMID:21822257) RGD PMID:21822257 NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143 		JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091 PMID:28673543 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371 		JBrowse link
G Larp1bl La ribonucleoprotein 1B like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:123,969,408...124,031,645
Ensembl chr 2:124,008,367...124,030,654 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO MGI:2179724 (PMID:11741878) RGD PMID:11741878 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457 		JBrowse link
G Meioc meiosis specific with coiled-coil domain involved_in ISO
IBA		 (MGI:5770021|PMID:26742488)
(PMID:26742488)
GO_REF:0000033		 RGD
GO_Central		 PMID:26742488 GO_REF:0000033 MGI:5770021 NCBI chr10:87,628,807...87,646,485
Ensembl chr10:87,628,875...87,646,752 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:29290617) RGD PMID:29290617 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Noct nocturnin involved_in ISS
ISO		 GO_REF:0000024
(PMID:22073225)
(MGI:5308514|PMID:22073225)		 UniProt
RGD		 PMID:22073225 GO_REF:0000024 MGI:5308514 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) RGD PMID:30842217 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in IMP
ISO		 (MGI:7539456|PMID:32732889)
(PMID:32732889)		 RGD PMID:32732889 PMID:16855020 MGI:7539456, RGD:10045995 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm10 RNA binding motif protein 10 IMP RGD PMID:19508861 RGD:151667451 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA		 (PMID:29104163)
GO_REF:0000033		 RGD
GO_Central		 PMID:29104163 GO_REF:0000033 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27956496)		 Ensembl
RGD
MGI		 PMID:27956496 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857755 (PMID:9009318)		 Ensembl
RGD		 PMID:9009318 GO_REF:0000107 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Taf15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:68,272,921...68,304,951
Ensembl chr10:68,272,969...68,304,949 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
G Tent5b terminal nucleotidyltransferase 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:145,695,358...145,702,668
Ensembl chr 5:145,695,362...145,706,073 		JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in ISO
IBA
IEA
ISS		 (PMID:28931820)
GO_REF:0000033
GO_REF:0000107
(MGI:5926094|PMID:28931820)
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:28931820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5926094 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744 		JBrowse link
G Tent5d terminal nucleotidyltransferase 5D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:72,901,287...72,974,562
Ensembl chr  X:72,901,241...72,970,573 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS		 (PMID:18794151)
GO_REF:0000024		 RGD
UniProt		 PMID:18794151 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Traf2 Tnf receptor-associated factor 2 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr 3:8,341,950...8,366,609
Ensembl chr 3:8,341,951...8,366,538 		JBrowse link
G Traf3ip2 Traf3 interacting protein 2 involved_in ISO (PMID:17785852), (PMID:21822258) RGD PMID:17785852 PMID:21822258 NCBI chr20:43,011,405...43,054,654
Ensembl chr20:43,011,450...43,054,667 		JBrowse link
G Traf5 TNF receptor-associated factor 5 involved_in ISO (PMID:21822258) RGD PMID:21822258 NCBI chr13:103,569,944...103,618,747
Ensembl chr13:103,572,314...103,618,709 		JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Vip vasoactive intestinal peptide involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:31358969)		 UniProt
RGD		 PMID:31358969 GO_REF:0000024 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
G Ybx2 Y box binding protein 2 acts_upstream_of_or_within ISO MGI:3576937 (PMID:17035640) RGD PMID:17035640 NCBI chr10:54,659,719...54,665,371
Ensembl chr10:54,659,719...54,665,371 		JBrowse link
G Zar1 zygote arrest 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:36264786)		 UniProt
RGD		 PMID:36264786 GO_REF:0000024 NCBI chr14:35,193,446...35,197,382
Ensembl chr14:35,193,446...35,197,382 		JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in ISO (PMID:28525753) RGD PMID:28525753 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:31868295)
(MGI:6384430|PMID:31868295)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:31868295 GO_REF:0000024 GO_REF:0000107 MGI:6384430 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fxr1 FMR1 autosomal homolog 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25225333)		 Ensembl
RGD		 PMID:25225333 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr13:47,309,607...47,357,432
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:25225333) RGD PMID:25225333 NCBI chr 1:196,187,914...196,198,843
Ensembl chr 1:196,187,835...196,198,844 		JBrowse link
negative regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag4 BAG cochaperone 4 IMP RGD PMID:14559896 RGD:2325853 NCBI chr16:66,288,678...66,305,893
Ensembl chr16:66,288,678...66,308,663 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C IDA RGD PMID:9792439 RGD:10041038 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IMP RGD PMID:11134005 RGD:10059415 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G C1qbp complement C1q binding protein involved_in ISO
IBA
IEA
ISS		 (PMID:10022843)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:10022843 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21470964)		 Ensembl
RGD		 PMID:21470964 GO_REF:0000107 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18480465)		 Ensembl
RGD		 PMID:18480465 GO_REF:0000107 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IMP RGD PMID:22570490 RGD:9999428 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553 		JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO (PMID:16376875) RGD PMID:16376875 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23636947)		 GO_Central
RGD		 PMID:23636947 GO_REF:0000033 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:15009664)
(PMID:23636947)
(MGI:6271441|PMID:17679093)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 PMID:17679093 PMID:23636947 GO_REF:0000024 MGI:6271441 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 5:74,313,367...74,399,439
Ensembl chr 5:74,315,101...74,399,791 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO
IDA		 PMID:35394688
(PMID:27630136), (PMID:29895960), (PMID:33110103)
(PMID:24960161), (PMID:34732726)
(MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103)
PMID:25573899
PMID:23307558		 RGD PMID:24960161 PMID:27630136 PMID:29895960 PMID:33110103 PMID:34732726 More... MGI:5817050 MGI:6162809 MGI:6472247, RGD:152025505, RGD:152025519, RGD:152025504, RGD:152025509 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:85,898,618...85,908,569
Ensembl chr 1:85,898,625...85,908,573 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS		 (PMID:12665594)
GO_REF:0000024		 RGD
UniProt		 PMID:12665594 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:12665594) RGD PMID:12665594 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038 		JBrowse link
G Sfswap splicing factor SWAP involved_in IDA PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr12:27,109,607...27,179,941
Ensembl chr12:27,109,611...27,179,884 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:11684676)
(MGI:3688015|PMID:11684676)		 RGD PMID:11684676 MGI:3688015 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 5:144,060,981...144,090,798
Ensembl chr 5:144,061,463...144,089,229 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 6:14,811,775...14,818,968
Ensembl chr 6:14,811,808...14,818,965 		JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 involved_in ISO
ISS		 (PMID:15009664)
GO_REF:0000024		 RGD
UniProt		 PMID:15009664 GO_REF:0000024 NCBI chr12:41,278,225...41,284,502
Ensembl chr12:41,275,687...41,284,499 		JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 1:68,760,911...68,779,730
Ensembl chr 1:68,760,924...68,778,492 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO
IEA		 (PMID:11051545)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 GO_REF:0000107 NCBI chr 2:190,546,015...190,582,787
Ensembl chr 2:190,554,980...190,582,784 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 involved_in ISO (PMID:11051545) RGD PMID:11051545 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IEA		 (PMID:11051545), (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:11051545 PMID:19029303 GO_REF:0000107 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISO
IEA		 (PMID:19029303)
GO_REF:0000107		 RGD
Ensembl		 PMID:19029303 GO_REF:0000107 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862 		JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 1:229,736,037...229,823,499
Ensembl chr 1:229,736,106...229,824,354 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in ISO
IEA		 (PMID:12881431)
GO_REF:0000107		 RGD
Ensembl		 PMID:12881431 GO_REF:0000107 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
G Dhx34 DExH-box helicase 34 involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 1:76,880,867...76,905,148
Ensembl chr 1:76,880,867...76,905,113 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344 		JBrowse link
G Nbas NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) RGD PMID:23828042 NCBI chr 6:36,048,357...36,353,206
Ensembl chr 6:36,048,191...36,352,984 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO
ISS		 (PMID:18447585)
GO_REF:0000024		 RGD
UniProt		 PMID:18447585 GO_REF:0000024 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Secisbp2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4433050 (PMID:24274065)		 Ensembl
RGD		 PMID:24274065 GO_REF:0000107 NCBI chr17:13,538,513...13,569,573
Ensembl chr17:13,538,513...13,569,523 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:12881431) RGD PMID:12881431 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay involved_in ISO MGI:107995|MGI:1915384 (PMID:27040500) RGD PMID:27040500 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS		 (PMID:18377426)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18377426 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) RGD PMID:16934922 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696 		JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within ISO (PMID:17452450) RGD PMID:17452450 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730 		JBrowse link
G Exosc2 exosome component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575 		JBrowse link
G Exosc3 exosome component 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060 		JBrowse link
G Exosc7 exosome component 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270 		JBrowse link
G Exosc8 exosome component 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Exosc9 exosome component 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051 		JBrowse link
G Pabpn1l PABPN1 like involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:6509577 (PMID:32558204)		 GO_Central
RGD		 PMID:32558204 GO_REF:0000033 NCBI chr19:50,669,965...50,673,409
Ensembl chr19:50,669,967...50,673,366 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO
IBA
IEA		 (PMID:21245038)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:21245038 GO_REF:0000033 GO_REF:0000107 NCBI chr16:1,920,062...1,925,638
Ensembl chr16:1,915,386...1,925,887 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482) RGD PMID:26000482 MGI:5706859 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within		 ISO (PMID:23644599)
(PMID:15814898)		 RGD PMID:15814898 PMID:23644599 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO (PMID:15814898) RGD PMID:15814898 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 acts_upstream_of_or_within ISO (PMID:15814898) RGD PMID:15814898 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575 		JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167 		JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IBA
IEA
ISS		 (PMID:20595389)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:20595389 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025 		JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 acts_upstream_of_or_within
involved_in		 ISO (PMID:18625844)
(PMID:21336257)		 RGD PMID:18625844 PMID:21336257 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Mlh1 mutL homolog 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857946 (PMID:11337385)		 Ensembl
RGD		 PMID:11337385 GO_REF:0000107 NCBI chr 8:111,196,468...111,233,721
Ensembl chr 8:111,196,468...111,233,617 		JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744 		JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204 		JBrowse link
G Parn poly(A)-specific ribonuclease involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:18337750)		 GO_Central
RGD		 PMID:18337750 GO_REF:0000033 NCBI chr10:1,410,636...1,548,573
Ensembl chr10:1,410,642...1,548,560 		JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO
IBA		 (PMID:27515512)
GO_REF:0000033
(MGI:5825409|PMID:27515512)		 RGD
GO_Central		 PMID:27515512 GO_REF:0000033 MGI:5825409 NCBI chr 1:47,843,224...47,861,675
Ensembl chr 1:47,843,224...47,861,674 		JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380 		JBrowse link
G Samd4b sterile alpha motif domain containing 4B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,689,413...83,728,652
Ensembl chr 1:83,689,413...83,713,853 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15814898)
(PMID:23644599)		 Ensembl
RGD		 PMID:15814898 PMID:23644599 GO_REF:0000107 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
piRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:24787618) FlyBase PMID:24787618 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Gtsf1 gametocyte specific factor 1 involved_in ISO (PMID:29437694) RGD PMID:29437694 NCBI chr 7:134,539,329...134,558,395
Ensembl chr 7:134,539,329...134,557,424 		JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:24787618), (PMID:25582079)		 Ensembl
RGD		 PMID:24787618 PMID:25582079 GO_REF:0000107 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:29437694)		 Ensembl
RGD		 PMID:29437694 GO_REF:0000107 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISO (PMID:29437694) FlyBase PMID:29437694 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761 		JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) RGD PMID:28792939 MGI:6162305 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) RGD PMID:28792939 MGI:6162305 NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169 		JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:32209697) RGD PMID:32209697 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS		 (PMID:18218628)
GO_REF:0000024		 RGD
UniProt		 PMID:18218628 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Larp4b La ribonucleoprotein 4B involved_in ISO (PMID:26001795) RGD PMID:26001795 NCBI chr17:61,138,663...61,217,423
Ensembl chr17:61,138,709...61,187,960 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISO (MGI:5903342|PMID:28188285)
(PMID:28188285)		 RGD PMID:28188285 MGI:5903342 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) RGD PMID:24356969 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr 1:33,765,949...33,799,405
Ensembl chr 1:33,765,672...33,799,433 		JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) RGD PMID:30026317 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537 		JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 zinc finger protein 36 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16364915)		 UniProt
RGD		 PMID:16364915 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
positive regulation of mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 IMP c-mos polyadenylation RGD PMID:15291744 RGD:1578405 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172 		JBrowse link
G Cdc73 cell division cycle 73 involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:19136632)		 Ensembl
UniProt
RGD		 PMID:19136632 GO_REF:0000024 GO_REF:0000107 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS		 (PMID:27940037)
GO_REF:0000024		 RGD
UniProt		 PMID:27940037 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9342333)		 UniProt
RGD		 PMID:9342333 GO_REF:0000024 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO
IEA		 (PMID:9342333)
GO_REF:0000107		 RGD
Ensembl		 PMID:9342333 GO_REF:0000107 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885 		JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:22977175) RGD PMID:22977175 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:23386060), (PMID:25038453) RGD PMID:23386060 PMID:25038453 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO (PMID:22977175) RGD PMID:22977175 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730 		JBrowse link
G Gtpbp1 GTP binding protein 1 involved_in IDA PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr 7:111,248,254...111,272,705
Ensembl chr 7:111,248,254...111,272,705 		JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IMP RGD PMID:15798208 RGD:9854643 NCBI chr 5:148,542,999...148,574,888
Ensembl chr 5:148,543,044...148,574,867 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:16126846)		 UniProt
RGD		 PMID:16126846 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:33020597) RGD PMID:33020597 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083 		JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA
ISO		 (PMID:16410805) RGD PMID:16410805 PMID:737213 RGD:11554176 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696 		JBrowse link
G Prr5l proline rich 5 like involved_in ISO
IEA
ISS		 (PMID:21964062)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21964062 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:88,001,951...88,173,532
Ensembl chr 3:88,003,617...88,082,763 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:6154479|PMID:25026077)
(PMID:25026077), (PMID:26000482)		 RGD PMID:25026077 PMID:26000482 MGI:5706859 MGI:6154479 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in ISO (PMID:31727855) RGD PMID:31727855 NCBI chr15:23,993,046...24,010,710
Ensembl chr15:23,993,048...24,010,668 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324), (PMID:25225333) RGD PMID:24726324 PMID:25225333 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(MGI:3842851|PMID:19322177), (MGI:5706909|PMID:23185455)
(PMID:19909337)		 UniProt
RGD		 PMID:19322177 PMID:19909337 PMID:23185455 GO_REF:0000024 MGI:3842851 MGI:5706909 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in IDA
IEA
ISO		 PMID:17185417
GO_REF:0000107
(PMID:21876179)		 Ensembl
RGD		 PMID:21876179 PMID:17185417 GO_REF:0000107, RGD:8553432 NCBI chr 4:67,012,129...67,062,428
Ensembl chr 4:67,012,185...67,062,428 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5795825|PMID:15634918)		 UniProt
RGD		 PMID:15634918 GO_REF:0000024 MGI:5795825 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327 		JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Upf1 UPF1, RNA helicase and ATPase acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay acts_upstream_of_or_within ISO (PMID:16789828) RGD PMID:16789828 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236 		JBrowse link
positive regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IDA RGD PMID:9792439 RGD:10041038 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390 		JBrowse link
positive regulation of mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 IDA RGD PMID:10331393 RGD:10450893 NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO (PMID:15009664) RGD PMID:15009664 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,533,857...9,538,899
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Dazap1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23636947)		 GO_Central
RGD		 PMID:23636947 GO_REF:0000033 NCBI chr 7:9,423,673...9,448,116
Ensembl chr 7:9,424,178...9,538,818 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (PMID:18480465) RGD PMID:18480465 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533 		JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:186,319,110...186,326,771
Ensembl chr 1:186,319,110...186,326,771 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23636947)		 Ensembl
RGD		 PMID:23636947 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:196,315,112...196,320,880
Ensembl chr 1:196,315,115...196,319,156 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) RGD PMID:23793891 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Ncl nucleolin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO
ISS		 (PMID:28221134)
GO_REF:0000024		 RGD
UniProt		 PMID:28221134 GO_REF:0000024 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr15:81,269,413...81,308,734
Ensembl chr15:81,269,416...81,308,734 		JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO UniProtKB:Q8IWL8 (PMID:16186110) RGD PMID:16186110 NCBI chr13:73,528,746...73,539,295
Ensembl chr13:73,528,210...73,539,355 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:18480465)		 Ensembl
RGD		 PMID:18480465 GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662 		JBrowse link
G Rbm3 RNA binding motif protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:14,348,909...14,352,387
Ensembl chr  X:14,348,910...14,353,580 		JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA
IBA		 PMID:19282290
GO_REF:0000033		 GO_Central PMID:19282290 GO_REF:0000033, RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rbmxl1b Rbmx like 1B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:43,956,275...43,957,957
Ensembl chr 4:43,956,281...43,957,944 		JBrowse link
G Rbmy1j RNA binding motif protein, Y-linked, family 1, member J involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  Y:415,160...425,460
Ensembl chr  Y:415,178...425,426 		JBrowse link
G Sf3b4 splicing factor 3B subunit 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23636947)		 GO_Central
RGD		 PMID:23636947 GO_REF:0000033 NCBI chr 2:183,732,791...183,737,545
Ensembl chr 2:183,732,754...183,737,959 		JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 1:95,856,038...95,876,434
Ensembl chr 1:95,856,036...95,876,392 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) RGD PMID:12840015 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20123736)		 UniProt
RGD		 PMID:20123736 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Tra2a transformer 2 alpha involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:22194695)		 GO_Central
RGD		 PMID:22194695 GO_REF:0000033 NCBI chr 4:78,220,838...78,239,737
Ensembl chr 4:78,220,883...78,239,712 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA
IEA		 GO_REF:0000024
MGI:2176173|MGI:4450919 (PMID:22194695)
GO_REF:0000033
GO_REF:0000107
(PMID:15009664)		 UniProt
RGD
GO_Central
Ensembl		 PMID:15009664 PMID:22194695 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within ISO (PMID:23636947) RGD PMID:23636947 NCBI chr 3:157,666,819...157,695,774
Ensembl chr 3:157,633,211...157,695,809 		JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19716330)
(MGI:5486537|PMID:19716330)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19716330 GO_REF:0000024 GO_REF:0000107 MGI:5486537 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:21278420) RGD PMID:21278420 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:21278420)
(PMID:19716330)
(MGI:5486537|PMID:19716330)		 RGD PMID:19716330 PMID:21278420 MGI:5486537 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:14731398) RGD PMID:14731398 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19716330)
(MGI:5486537|PMID:19716330)		 UniProt
RGD		 PMID:19716330 GO_REF:0000024 MGI:5486537 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) RGD PMID:19716330 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) RGD PMID:21984185 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21336257)		 UniProt
Ensembl
RGD		 PMID:21336257 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21278420)
GO_REF:0000104
(MGI:5487524|PMID:21278420)
(PMID:12748283)		 UniProt
RGD		 PMID:12748283 PMID:21278420 GO_REF:0000024 GO_REF:0000104 MGI:5487524 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in IDA PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (MGI:5320815|PMID:22367205)
(PMID:22367205)		 RGD PMID:22367205 MGI:5320815 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19716330)
(MGI:5486537|PMID:19716330)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19716330 GO_REF:0000024 GO_REF:0000107 MGI:5486537 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:18337750) RGD PMID:18337750 NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628 		JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:21278420), (PMID:23644599) RGD PMID:21278420 PMID:23644599 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:21278420)
(MGI:5486537|PMID:19716330)		 RGD PMID:19716330 PMID:21278420 MGI:5486537 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) RGD PMID:32354837 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:19716330)
(MGI:5486537|PMID:19716330)		 UniProt
RGD		 PMID:19716330 GO_REF:0000024 MGI:5486537 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Polr2g RNA polymerase II subunit G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:205,689,160...205,692,537
Ensembl chr 1:205,689,160...205,692,686 		JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660 		JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO
IBA		 (PMID:19716330)
GO_REF:0000033		 RGD
GO_Central		 PMID:19716330 GO_REF:0000033 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790 		JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO
IBA		 (PMID:21984185)
GO_REF:0000033		 RGD
GO_Central		 PMID:21984185 GO_REF:0000033 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in ISO
IEA
ISS		 (PMID:21336257)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21336257 GO_REF:0000024 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5487524|PMID:21278420), (MGI:5795819|PMID:20595389)
GO_REF:0000107
(PMID:10330172)		 UniProt
RGD
Ensembl		 PMID:10330172 PMID:20595389 PMID:21278420 GO_REF:0000024 GO_REF:0000107 MGI:5487524 MGI:5795819 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arb2a ARB2 cotranscriptional regulator A involved_in ISO (MGI:6113784|PMID:29311329)
(PMID:29311329)		 RGD PMID:29311329 MGI:6113784 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162 		JBrowse link
G Arglu1 arginine and glutamate rich 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:30698747)		 UniProt
RGD		 PMID:30698747 GO_REF:0000024 NCBI chr16:80,753,300...80,777,350
Ensembl chr16:80,753,315...80,777,349 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:32109384)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:32109384 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426 		JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:70,904,462...71,729,072
Ensembl chr17:71,210,853...71,728,333 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO
IBA		 (PMID:11158314)
GO_REF:0000033		 RGD
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:11158314)
(PMID:19720736)		 RGD PMID:11158314 PMID:19720736 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786 		JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA		 (PMID:11158314)
GO_REF:0000033		 RGD
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr 7:8,225,787...8,250,322
Ensembl chr 7:8,225,825...8,250,322 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in ISO
IBA		 (PMID:14761971)
GO_REF:0000033		 RGD
GO_Central		 PMID:14761971 GO_REF:0000033 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041 		JBrowse link
G Ddx17 DEAD-box helicase 17 involved_in ISO (PMID:23022728)
(MGI:5819339|PMID:23022728)		 RGD PMID:23022728 MGI:5819339 NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:21343338), (PMID:23022728)
(PMID:23022728)
(MGI:5819339|PMID:23022728)		 RGD PMID:21343338 PMID:23022728 MGI:5819339 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IDA PMID:22767602 UniProt PMID:22767602 RGD:8554210 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Fblim1 filamin binding LIM protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:153,883,945...153,915,524
Ensembl chr 5:153,883,960...153,913,757 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISO
ISS		 (PMID:18653529)
(MGI:5009520|PMID:18653529)
GO_REF:0000024		 RGD
UniProt		 PMID:18653529 GO_REF:0000024 MGI:5009520 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) RGD PMID:25689357 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in ISO
IEA
ISS		 (PMID:25623890)
(PMID:22523384)
GO_REF:0000107
(MGI:5441689|PMID:22523384)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22523384 PMID:25623890 GO_REF:0000024 GO_REF:0000107 MGI:5441689 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO		 GO_REF:0000107
(PMID:22325991)		 Ensembl
RGD		 PMID:22325991 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISS
IBA
IDA
ISO		 GO_REF:0000024
GO_REF:0000033
PMID:15345239
(PMID:24514149)		 UniProt
GO_Central
RGD		 PMID:24514149 PMID:15345239 GO_REF:0000024 GO_REF:0000033, RGD:1358238 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180 		JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530 		JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in IDA
IBA		 PMID:15345239
GO_REF:0000033		 GO_Central PMID:15345239 GO_REF:0000033, RGD:1358238 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22203037)		 UniProt
Ensembl
RGD		 PMID:22203037 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617 		JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in IMP PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368 		JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 involved_in
acts_upstream_of_or_within		 IMP
ISO		 PMID:31283468
(PMID:19720736)		 RGD PMID:19720736 PMID:31283468 RGD:243049249 NCBI chr15:97,385,278...97,542,924
Ensembl chr15:97,385,244...97,542,937 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 PMID:9525963
(PMID:9525963)		 RGD PMID:9525963 PMID:9525963 RGD:8553451 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:14615540), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
GO_REF:0000107
(MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)		 UniProt
RGD
GO_Central
Ensembl		 PMID:14615540 PMID:17065982 PMID:27223325 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in ISO
IBA		 (PMID:32197073)
(PMID:14615540), (PMID:16041372), (PMID:17065982), (PMID:27223325)
GO_REF:0000033
(MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540)		 RGD
GO_Central		 PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 PMID:32197073 GO_REF:0000033 MGI:3587155 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021 		JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000002
(PMID:21296756)		 UniProt
Ensembl
InterPro
RGD		 PMID:21296756 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO
ISS		 (PMID:16260624), (PMID:21518792)
GO_REF:0000024		 RGD
UniProt		 PMID:16260624 PMID:21518792 GO_REF:0000024 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:107,782,799...107,793,759
Ensembl chr 7:107,782,770...107,794,531 		JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23300487)		 GO_Central
RGD		 PMID:23300487 GO_REF:0000033 NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659 		JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP
IEA		 (MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796)
(PMID:17101796), (PMID:17715393)
MGI:1926224|MGI:4838182 (PMID:22357600)
GO_REF:0000033
PMID:37548402
Cacna1c
Fxr1, Mef2a, Mtmr3
Atp2b1, Mef2a
Mcl1
GO_REF:0000107
GO_REF:0000002		 RGD
GO_Central
Ensembl
InterPro		 PMID:17101796 PMID:17715393 PMID:22357600 PMID:37548402 PMID:28993448 More... GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 MGI:3770484 MGI:5284784, RGD:401901235, RGD:329848961, RGD:329845874, RGD:329845873, RGD:329845872 NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691 		JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,720,355...104,157,277
Ensembl chr10:103,720,636...104,156,935 		JBrowse link
G Rbm11 RNA binding motif protein 11 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:21984414)
GO_REF:0000033		 RGD
GO_Central		 PMID:21984414 GO_REF:0000033 NCBI chr11:14,234,851...14,244,092
Ensembl chr11:14,234,890...14,244,090 		JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO
IBA		 (PMID:26575292)
GO_REF:0000033
(MGI:6158801|PMID:25468569)		 RGD
GO_Central		 PMID:25468569 PMID:26575292 GO_REF:0000033 MGI:6158801 NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703 		JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA		 (PMID:16129689)
GO_REF:0000033		 RGD
GO_Central		 PMID:16129689 GO_REF:0000033 NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
IDA		 PMID:33805770
PMID:27289039		 UniProt PMID:33805770 PMID:27289039 RGD:152995553, RGD:152995577 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
IDA		 (PMID:26844700), (PMID:26990106), (PMID:29104163)
GO_REF:0000033
PMID:27289039
(MGI:6148527|PMID:25313962)		 RGD
GO_Central		 PMID:25313962 PMID:26844700 PMID:26990106 PMID:29104163 PMID:27289039 GO_REF:0000033 MGI:6148527, RGD:152995577 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO
IBA		 (PMID:18663000)
GO_REF:0000033		 RGD
GO_Central		 PMID:18663000 GO_REF:0000033 NCBI chr 6:103,271,775...103,319,090
Ensembl chr 6:103,271,801...103,317,854 		JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:10,267,026...10,270,510
Ensembl chr10:10,267,260...10,269,710 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:12628928), (PMID:16260624), (PMID:16777844), (PMID:16934801), (PMID:21518792)
MGI:5467987|MGI:5467988 (PMID:23129807)		 RGD PMID:12628928 PMID:16260624 PMID:16777844 PMID:16934801 PMID:21518792 More... NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:31358901) RGD PMID:31358901 NCBI chr14:42,053,290...42,191,572
Ensembl chr14:42,154,142...42,189,431 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO
IEA
ISS		 (PMID:18840686), (PMID:18951082)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:18840686 PMID:18951082 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,420,220...108,449,481
Ensembl chr 8:108,420,222...108,449,430 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISS
ISO		 GO_REF:0000024
(PMID:22203037)		 UniProt
RGD		 PMID:22203037 GO_REF:0000024 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
G Rbmx RNA binding motif protein, X-linked involved_in ISO (PMID:12165565), (PMID:12761049) RGD PMID:12165565 PMID:12761049 NCBI chr  X:135,305,237...135,314,806
Ensembl chr  X:135,305,325...135,314,743 		JBrowse link
G Rbmxl1 Rbmx like 1 involved_in IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:29,407,902...29,411,519
Ensembl chr19:29,407,912...29,412,859 		JBrowse link
G Rbpms RNA binding protein, mRNA processing factor involved_in IMP PMID:37548402 UniProt PMID:37548402 RGD:401901235 NCBI chr16:58,239,370...58,395,424
Ensembl chr16:58,239,474...58,395,426 		JBrowse link
G Rbpms2 RNA binding protein, mRNA processing factor 2 involved_in IDA PMID:31283468 UniProt PMID:31283468 RGD:243049249 NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:21884984)
(MGI:6201823|PMID:21884984)		 UniProt
RGD		 PMID:21884984 GO_REF:0000024 MGI:6201823 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO
ISS		 (PMID:22203037)
GO_REF:0000024		 RGD
UniProt		 PMID:22203037 GO_REF:0000024 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Sap18 Sin3A associated protein 18 involved_in ISO (PMID:20966198), (PMID:22203037) RGD PMID:20966198 PMID:22203037 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038 		JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:55,856,691...55,875,262
Ensembl chr 5:55,856,246...55,875,300 		JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:29961578)
MGI:1856676 (PMID:23055939)
(MGI:6201863|PMID:25727884)		 RGD PMID:23055939 PMID:25727884 PMID:29961578 MGI:6201863 NCBI chr12:39,998,975...40,158,897
Ensembl chr12:39,999,488...40,155,725 		JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 involved_in ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:47,606,526...47,631,509
Ensembl chr 5:47,606,285...47,629,778 		JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 acts_upstream_of_or_within ISO (PMID:21470964) RGD PMID:21470964 NCBI chr10:102,052,158...102,055,365
Ensembl chr10:102,052,314...102,055,338 		JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:23132731)
(PMID:24440982)		 UniProt
RGD		 PMID:23132731 PMID:24440982 GO_REF:0000024 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO
ISS		 (PMID:20932480)
GO_REF:0000024		 RGD
UniProt		 PMID:20932480 GO_REF:0000024 NCBI chr 5:138,445,284...138,487,544
Ensembl chr 5:138,445,295...138,487,477 		JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:14966131), (PMID:17580305)
(PMID:10938105), (PMID:11514562)
(MGI:6827199|PMID:11514562), (MGI:6827311|PMID:10938105)		 RGD PMID:10938105 PMID:11514562 PMID:14966131 PMID:17580305 MGI:6827199 MGI:6827311 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586 		JBrowse link
G Tra2b transformer 2 beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:12165565), (PMID:12761049), (PMID:25689357)		 UniProt
Ensembl
RGD		 PMID:12165565 PMID:12761049 PMID:25689357 GO_REF:0000024 GO_REF:0000107 NCBI chr11:78,788,880...78,807,252
Ensembl chr11:78,788,884...78,807,249 		JBrowse link
G Wtap WT1 associated protein involved_in ISO
IBA		 (PMID:24407421)
GO_REF:0000033		 RGD
GO_Central		 PMID:24407421 GO_REF:0000033 NCBI chr 1:47,665,965...47,691,067
Ensembl chr 1:47,665,965...47,691,065 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:29799838)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:29799838 GO_REF:0000033 GO_REF:0000107 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO
ISS
IEA		 (PMID:24514149)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:24514149 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539 		JBrowse link
regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Caprin1 cell cycle associated protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:31439799)		 UniProt
Ensembl
RGD		 PMID:31439799 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502 		JBrowse link
regulation of mitochondrial mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fastk Fas-activated serine/threonine kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,732,273...10,736,332
Ensembl chr 4:10,732,256...10,737,430 		JBrowse link
G Fastkd1 FAST kinase domains 1 involved_in ISO
IBA		 (PMID:28335001)
GO_REF:0000033		 RGD
GO_Central		 PMID:28335001 GO_REF:0000033 NCBI chr 3:54,449,710...54,475,624
Ensembl chr 3:54,449,711...54,475,540 		JBrowse link
G Fastkd2 FAST kinase domains 2 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:65,166,148...65,188,184
Ensembl chr 9:65,168,228...65,188,174 		JBrowse link
G Fastkd3 FAST kinase domains 3 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:27789713)		 UniProt
GO_Central
InterPro
RGD		 PMID:27789713 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:34,858,342...34,866,988
Ensembl chr 1:34,858,219...34,866,973 		JBrowse link
G Fastkd5 FAST kinase domains 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:117,830,219...117,847,707
Ensembl chr 3:117,830,083...117,847,820 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21666256)		 Ensembl
RGD		 PMID:21666256 GO_REF:0000107 NCBI chr16:1,920,062...1,925,638
Ensembl chr16:1,915,386...1,925,887 		JBrowse link
G Tbrg4 transforming growth factor beta regulator 4 involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:28335001)		 UniProt
GO_Central
RGD		 PMID:28335001 GO_REF:0000024 GO_REF:0000033 NCBI chr14:81,481,977...81,490,781
Ensembl chr14:81,481,981...81,490,756 		JBrowse link
regulation of mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcyl1 adenosylhomocysteinase-like 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:19224921)
GO_REF:0000107		 RGD
Ensembl		 PMID:19224921 GO_REF:0000107 NCBI chr 2:195,294,149...195,328,586
Ensembl chr 2:195,294,153...195,345,815 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 involved_in ISO
IEA		 (PMID:19575011)
GO_REF:0000107
(MGI:5616315|PMID:19575011)		 RGD
Ensembl		 PMID:19575011 GO_REF:0000107 MGI:5616315 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:28383716) RGD PMID:28383716 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISO (PMID:21832157) RGD PMID:21832157 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
regulation of mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam3a ADAM metallopeptidase domain 3A acts_upstream_of_or_within ISO MGI:2156167 (PMID:19129510) RGD PMID:19129510 NCBI chr16:67,299,949...67,349,970
Ensembl chr16:67,299,949...67,349,968 		JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase acts_upstream_of_or_within ISO
ISS		 (PMID:23177736)
GO_REF:0000024		 RGD
UniProt		 PMID:23177736 GO_REF:0000024 NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331 		JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Cdk11b cyclin-dependent kinase 11B involved_in ISO (PMID:12501247) RGD PMID:12501247 NCBI chr 5:166,212,761...166,238,883
Ensembl chr 5:166,212,829...166,238,876 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO
IBA		 (PMID:28355180)
GO_REF:0000033		 RGD
GO_Central		 PMID:28355180 GO_REF:0000033 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069 		JBrowse link
G Hdac7 histone deacetylase 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37369679)		 Ensembl
RGD		 PMID:37369679 GO_REF:0000107 NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISO
IEA
ISS		 (PMID:17234882)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17234882 GO_REF:0000024 GO_REF:0000107 NCBI chr18:23,695,496...23,737,363
Ensembl chr18:23,695,425...23,736,172 		JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in IEA
ISO		 GO_REF:0000107
(PMID:37369679)		 Ensembl
RGD		 PMID:37369679 GO_REF:0000107 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISO (PMID:23115303) RGD PMID:23115303 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 IMP RGD PMID:12124753 RGD:708602 NCBI chr 6:63,780,105...63,905,567
Ensembl chr 6:63,783,489...63,906,289 		JBrowse link
G Ptcd2 pentatricopeptide repeat domain 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3830811 (PMID:18729827)		 GO_Central
RGD		 PMID:18729827 GO_REF:0000033 NCBI chr 2:30,712,276...30,739,968
Ensembl chr 2:30,712,280...30,739,942 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISO (PMID:23115303) RGD PMID:23115303 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
G Safb scaffold attachment factor B involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:9671816 GO_REF:0000033, RGD:634000 NCBI chr 9:1,417,449...1,438,408
Ensembl chr 9:1,417,525...1,438,644 		JBrowse link
G Safb2 scaffold attachment factor B2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:1,395,852...1,417,010
Ensembl chr 9:1,387,107...1,417,038 		JBrowse link
G Sltm SAFB-like, transcription modulator involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:71,215,995...71,261,821
Ensembl chr 8:71,216,612...71,261,825 		JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO
IBA		 (PMID:8208298)
(PMID:9446799)
GO_REF:0000033
(MGI:1195449|PMID:9446799)		 RGD
GO_Central		 PMID:8208298 PMID:9446799 GO_REF:0000033 MGI:1195449 NCBI chr20:6,645,809...6,682,448
Ensembl chr20:6,645,809...6,682,134 		JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:11,464,684...11,655,993
Ensembl chr 4:11,464,674...11,655,990 		JBrowse link
G Srpk3 SRSF protein kinase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:151,510,452...151,515,208
Ensembl chr  X:151,510,539...151,515,198 		JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor involved_in ISO (MGI:5508611|PMID:17234882)
(PMID:17234882)		 RGD PMID:17234882 MGI:5508611 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780 		JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in ISO
IEA
ISS		 (PMID:19574390)
GO_REF:0000107
(MGI:4940413|PMID:21300889)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19574390 PMID:21300889 GO_REF:0000024 GO_REF:0000107 MGI:4940413 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182 		JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 involved_in ISO (MGI:5302133|PMID:22196734)
(PMID:22196734)		 RGD PMID:22196734 MGI:5302133 NCBI chr 5:142,051,844...142,089,175
Ensembl chr 5:142,063,570...142,089,180 		JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 involved_in ISO (MGI:5302133|PMID:22196734) RGD PMID:22196734 MGI:5302133 NCBI chr 9:34,447,023...34,953,684
Ensembl chr 9:34,447,056...34,915,530 		JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 involved_in ISO
IEA		 (MGI:5302133|PMID:22196734)
(PMID:22196734)
GO_REF:0000117		 RGD
UniProt		 PMID:22196734 GO_REF:0000117 MGI:5302133 NCBI chr 7:100,837,707...100,995,644
Ensembl chr 7:100,837,934...100,988,460 		JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO
ISS		 (PMID:32017898)
(MGI:6400674|PMID:32017896)
GO_REF:0000024		 RGD
UniProt		 PMID:32017896 PMID:32017898 GO_REF:0000024 MGI:6400674 NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865 		JBrowse link
G LOC100359916 heterogeneous nuclear ribonucleoprotein K-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:58,668,326...58,670,222
Ensembl chr 5:58,668,327...58,670,220 		JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine involved_in
NOT|involved_in		 ISO (PMID:28525753)
(PMID:29262316)
(MGI:6114846|PMID:29262316)		 RGD PMID:28525753 PMID:29262316 MGI:6114846 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G Qki QKI, KH domain containing RNA binding involved_in ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:33378678), (PMID:33397958), (PMID:36627242)
(PMID:29021242)
GO_REF:0000033
(MGI:6108922|PMID:29021242), (MGI:6504661|PMID:33397958), (MGI:6514532|PMID:33378678), (MGI:7485690|PMID:36627242)
(PMID:27029405), (PMID:31331967)
(PMID:34428287)
GO_REF:0000107		 UniProt
RGD
GO_Central
Ensembl		 PMID:27029405 PMID:29021242 PMID:31331967 PMID:33378678 PMID:33397958 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6108922 MGI:6504661 MGI:6514532 MGI:7485690 NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:26604136), (PMID:27496873), (PMID:30948719), (PMID:32840935)
(PMID:33188278)		 RGD PMID:26604136 PMID:27496873 PMID:30948719 PMID:32840935 PMID:33188278 NCBI chr 1:252,683,760...252,907,465
Ensembl chr 1:252,683,771...252,886,060 		JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO (PMID:15694343), (PMID:28302793), (PMID:28437394) RGD PMID:15694343 PMID:28302793 PMID:28437394 NCBI chr 3:144,662,998...144,696,222
Ensembl chr 3:144,663,001...144,696,213 		JBrowse link
G Sf1 splicing factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:203,670,016...203,683,432
Ensembl chr 1:203,670,018...203,684,330 		JBrowse link
G Son SON DNA and RNA binding protein involved_in ISO
IBA		 (PMID:21504830)
GO_REF:0000033		 RGD
GO_Central		 PMID:21504830 GO_REF:0000033 NCBI chr11:30,850,890...30,923,167
Ensembl chr11:30,892,005...30,923,167 		JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,559,515...147,591,895
Ensembl chr 5:147,559,514...147,591,849 		JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 involved_in ISO (PMID:26876937) RGD PMID:26876937 NCBI chr 5:148,088,759...148,102,964
Ensembl chr 5:148,088,823...148,101,768 		JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 involved_in ISO (PMID:26876937), (PMID:32440474) RGD PMID:26876937 PMID:32440474 NCBI chr20:7,091,928...7,101,860
Ensembl chr20:7,091,910...7,101,078 		JBrowse link
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein involved_in ISO (PMID:11106748), (PMID:7488725) RGD PMID:7488725 PMID:11106748 NCBI chr 4:118,852,765...118,883,252
Ensembl chr 4:118,852,837...118,880,586 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS		 (PMID:26876937), (PMID:28984244)
GO_REF:0000024		 RGD
UniProt		 PMID:26876937 PMID:28984244 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
regulation of mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 IMP RGD PMID:26846850 RGD:11526737 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 IMP RGD PMID:26846850 RGD:11526737 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase involved_in ISS
ISO		 GO_REF:0000024
(MGI:6111276|PMID:29279410)		 UniProt
RGD		 PMID:29279410 GO_REF:0000024 MGI:6111276 NCBI chr10:45,344,888...45,366,331
Ensembl chr10:45,343,395...45,366,331 		JBrowse link
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO
IEA
ISS		 (PMID:19401441)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19401441 GO_REF:0000024 GO_REF:0000107 NCBI chr15:24,144,595...24,146,785
Ensembl chr15:24,144,362...24,146,785 		JBrowse link
G Brf1 BRF1, RNA polymerase III transcription initiation factor subunit acts_upstream_of_or_within ISO (PMID:14976220) RGD PMID:14976220 NCBI chr 6:132,034,378...132,081,313
Ensembl chr 6:132,037,272...132,081,278 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 IMP RGD PMID:18923037 RGD:13524564 NCBI chr 1:65,800,059...65,831,246
Ensembl chr 1:65,800,355...65,831,006 		JBrowse link
G Calcr calcitonin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9002981)		 Ensembl
RGD		 PMID:9002981 GO_REF:0000107 NCBI chr 4:31,661,270...31,736,392
Ensembl chr 4:31,661,273...31,736,392 		JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:21078874)
GO_REF:0000033
(MGI:5320273|PMID:21078874)		 UniProt
RGD
GO_Central		 PMID:21078874 GO_REF:0000024 GO_REF:0000033 MGI:5320273 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019 		JBrowse link
G Csdc2 cold shock domain containing C2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,451,998...113,466,464
Ensembl chr 7:113,451,998...113,466,463 		JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:28002401) RGD PMID:28002401 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18279852)		 UniProt
RGD		 PMID:18279852 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IMP RGD PMID:22736542 RGD:9586719 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:17417632)
GO_REF:0000033
(MGI:3710908|PMID:17417632)		 UniProt
RGD
GO_Central		 PMID:17417632 GO_REF:0000024 GO_REF:0000033 MGI:3710908 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Fxr1-ps1 FMR1 autosomal homolog 1, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G Fxr2 FMR1 autosomal homolog 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within ISO (PMID:14976220) RGD PMID:14976220 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:16126846)		 UniProt
RGD		 PMID:16126846 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,403
Ensembl chr 9:1,862,899...1,872,451 		JBrowse link
G Pabpc4 poly(A) binding protein, cytoplasmic 4 acts_upstream_of_or_within ISO (PMID:24469397) RGD PMID:24469397 NCBI chr 5:135,563,142...135,578,985
Ensembl chr 5:135,563,562...135,578,979 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) RGD PMID:20817677 NCBI chr 8:107,092,688...107,103,276
Ensembl chr 8:107,093,013...107,103,276 		JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (PMID:20870947) RGD PMID:20870947 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712 		JBrowse link
G Pias4 protein inhibitor of activated STAT, 4 involved_in ISO (PMID:34048572) RGD PMID:34048572 NCBI chr 7:8,546,312...8,559,838
Ensembl chr 7:8,546,312...8,559,808 		JBrowse link
G Pum1 pumilio RNA-binding family member 1 involved_in ISO
IBA		 (PMID:26724866)
GO_REF:0000033		 RGD
GO_Central		 PMID:26724866 GO_REF:0000033 NCBI chr 5:142,836,933...142,954,331
Ensembl chr 5:142,837,127...142,954,039 		JBrowse link
G Pum2 pumilio RNA-binding family member 2 involved_in ISO
IBA		 (PMID:26724866)
GO_REF:0000033		 RGD
GO_Central		 PMID:26724866 GO_REF:0000033 NCBI chr 6:31,462,879...31,542,976
Ensembl chr 6:31,462,872...31,542,976 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:4999688|PMID:20977548)
(PMID:20977548)		 RGD PMID:20977548 MGI:4999688 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm33 RNA binding motif protein 33 involved_in ISO (PMID:37257451) RGD PMID:37257451 NCBI chr 4:6,980,807...7,088,334
Ensembl chr 4:6,983,970...7,089,918 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933)
(PMID:18172933)		 RGD PMID:18172933 MGI:5284769 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
G Rnasel ribonuclease L acts_upstream_of_or_within ISO (PMID:22441668) RGD PMID:22441668 NCBI chr13:65,894,990...65,910,354
Ensembl chr13:65,901,459...65,908,704 		JBrowse link
G Samd4a sterile alpha motif domain containing 4A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380 		JBrowse link
G Scgb1a1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (PMID:15356574) RGD PMID:15356574 NCBI chr 1:205,977,060...205,980,610
Ensembl chr 1:205,977,060...205,980,610 		JBrowse link
G Senp1 SUMO specific peptidase 1 involved_in ISO (PMID:34048572) RGD PMID:34048572 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598 		JBrowse link
G Vim vimentin involved_in IEA
ISO		 GO_REF:0000107
(PMID:21746880)		 Ensembl
RGD		 PMID:21746880 GO_REF:0000107 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)		 RGD PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172 		JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:24284625), (PMID:26046440), (PMID:32492408)
(MGI:6490006|PMID:32943573)		 RGD PMID:24284625 PMID:26046440 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144 		JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in ISO (PMID:32194978), (PMID:32492408)
(PMID:32943573)
(MGI:6490006|PMID:32943573)		 RGD PMID:32194978 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 2:98,350,304...98,384,608
Ensembl chr 2:98,350,588...98,384,606 		JBrowse link
G Zc3h14 zinc finger CCCH type containing 14 involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 6:118,006,420...118,044,480
Ensembl chr 6:118,006,458...118,044,105 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:11719186), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:20702587), (PMID:9703499)
(PMID:15634918), (PMID:17288565), (PMID:22701344)
(PMID:15467755)
(MGI:5784976|PMID:22701344), (MGI:5795824|PMID:17288565), (MGI:5795825|PMID:15634918)
GO_REF:0000024		 RGD
UniProt		 PMID:9703499 PMID:11719186 PMID:15187101 PMID:15467755 PMID:15634918 More... GO_REF:0000024 MGI:5784976 MGI:5795824 MGI:5795825 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in
acts_upstream_of_or_within		 IDA
ISO
ISS		 PMID:12748283
(PMID:20622884), (PMID:22701344), (PMID:24700863), (PMID:24733888)
(PMID:15467755)
(PMID:12198173), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:20702587), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344)
GO_REF:0000024
PMID:11279239		 RGD
UniProt		 PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 MGI:4818820 MGI:5784967 MGI:5784968 MGI:5784976, RGD:11344945, RGD:11344953 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:25106868)
(PMID:20622884), (PMID:22701344)
(PMID:15467755)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)		 RGD PMID:15467755 PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) RGD PMID:12080348 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
regulation of mRNA stability involved in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO
ISS		 (PMID:17101699)
GO_REF:0000024		 RGD
UniProt		 PMID:17101699 GO_REF:0000024 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:31636267) RGD PMID:31636267 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839 		JBrowse link
regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casc3 CASC3 exon junction complex subunit involved_in ISO
IEA		 (PMID:19478851)
GO_REF:0000107		 RGD
Ensembl		 PMID:19478851 GO_REF:0000107 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:19478851) RGD PMID:19478851 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Magoh mago homolog, exon junction complex subunit involved_in ISO
IEA		 (PMID:19478851)
GO_REF:0000107		 RGD
Ensembl		 PMID:19478851 GO_REF:0000107 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617 		JBrowse link
G Rbm8a RNA binding motif protein 8A involved_in ISO (PMID:19478851) RGD PMID:19478851 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
siRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15260970), (PMID:22795694)		 Ensembl
RGD		 PMID:15260970 PMID:22795694 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974 		JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230 		JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632 		JBrowse link
transposable element silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mov10 Mov10 RNA helicase involved_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:3815367|PMID:18922463)
(PMID:18922463)		 RGD PMID:18922463 MGI:3815367 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISO (MGI:3815367|PMID:18922463) RGD PMID:18922463 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465 		JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (PMID:30122351) RGD PMID:30122351 NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20133
    cellular process 19325
      regulation of cellular process 12758
        regulation of metabolic process 6822
          regulation of macromolecule metabolic process 6278
            regulation of RNA metabolic process 3671
              regulation of mRNA metabolic process 390
                negative regulation of mRNA metabolic process + 103
                positive regulation of mRNA metabolic process + 226
                regulation of deadenylation-independent decapping of nuclear-transcribed mRNA + 1
                regulation of mRNA catabolic process + 273
                regulation of mRNA modification + 4
                regulation of mRNA processing + 139
Path 2
Term Annotations click to browse term
  biological_process 20133
    biological regulation 13561
      regulation of biological process 13134
        regulation of cellular process 12758
          regulation of metabolic process 6822
            regulation of primary metabolic process 5712
              regulation of nucleobase-containing compound metabolic process 3981
                regulation of RNA metabolic process 3671
                  regulation of mRNA metabolic process 390
                    negative regulation of mRNA metabolic process + 103
                    positive regulation of mRNA metabolic process + 226
                    regulation of deadenylation-independent decapping of nuclear-transcribed mRNA + 1
                    regulation of mRNA catabolic process + 273
                    regulation of mRNA modification + 4
                    regulation of mRNA processing + 139
paths to the root