ONTOLOGY REPORT - ANNOTATIONS |
|
|
Term: | regulation of extracellular matrix organization |
|
Accession: | GO:1903053
|
browse the term
|
Definition: | Any process that modulates the frequency, rate or extent of extracellular matrix organization. |
Synonyms: | exact_synonym: | regulation of extracellular matrix organisation |
| related_synonym: | regulation of extracellular matrix organization and biogenesis |
|
|
|
G |
ABL1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:20980600) |
Ensembl MGI |
PMID:20980600 |
GO_REF:0000107 |
NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708
|
|
G |
ABL2 |
ABL proto-oncogene 2, non-receptor tyrosine kinase |
acts_upstream_of_or_within |
ISO |
(PMID:20980600) |
MGI |
PMID:20980600 |
|
NCBI chr 9:120,888,891...120,984,724
Ensembl chr 9:120,892,952...120,984,695
|
|
G |
ANGPTL7 |
angiopoietin like 7 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:71,350,872...71,356,299
Ensembl chr 6:71,350,033...71,356,662
|
|
G |
AXIN2 |
axin 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,298...12,343,200
|
|
G |
ITGB3 |
integrin subunit beta 3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:22984613) |
Ensembl MGI |
PMID:22984613 |
GO_REF:0000107 |
NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,514...16,752,292
|
|
G |
LEMD3 |
LEM domain containing 3 |
acts_upstream_of_or_within |
ISO |
(PMID:16943282) |
MGI |
PMID:16943282 |
|
NCBI chr 5:29,596,334...29,672,704
Ensembl chr 5:29,596,334...29,673,875
|
|
G |
PRDM5 |
PR/SET domain 5 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 8:103,188,312...103,383,955
Ensembl chr 8:103,189,561...103,382,094
|
|
G |
SLC2A10 |
solute carrier family 2 member 10 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(PMID:26376865) |
ARUK-UCL Ensembl |
PMID:26376865 |
GO_REF:0000107 |
NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201
|
|
G |
TCF15 |
transcription factor 15 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:24038871) |
Ensembl MGI |
PMID:24038871 |
GO_REF:0000107 |
NCBI chr17:34,626,682...34,632,881
Ensembl chr17:34,626,670...34,633,263
|
|
G |
TGFB2 |
transforming growth factor beta 2 |
acts_upstream_of_or_within |
ISO |
(PMID:21780244) |
MGI |
PMID:21780244 |
|
NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341
|
|
G |
ZNF469 |
zinc finger protein 469 |
involved_in |
ISO |
(PMID:21664999) |
ARUK-UCL |
PMID:21664999 |
|
NCBI chr 6:1,161,514...1,208,406
Ensembl chr 6:1,162,822...1,174,257
|
|
|
G |
CHADL |
chondroadherin like |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 5:7,246,892...7,258,962
Ensembl chr 5:7,248,444...7,253,170
|
|
G |
EMILIN1 |
elastin microfibril interfacer 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429
|
|
|
G |
ANTXR1 |
ANTXR cell adhesion molecule 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:25572963) |
Ensembl MGI |
PMID:25572963 |
GO_REF:0000107 |
NCBI chr 3:73,157,744...73,398,379
Ensembl chr 3:73,157,747...73,398,379
|
|
G |
MIR145 |
microRNA mir-145 |
involved_in acts_upstream_of |
ISO |
(PMID:25704091) (PMID:25323858) |
BHF-UCL |
PMID:25323858 PMID:25704091 |
|
NCBI chr 2:150,580,126...150,580,211
Ensembl chr 2:150,580,126...150,580,211
|
|
G |
MIR18A |
microRNA mir-18a |
involved_in |
ISO |
(PMID:28131417) |
BHF-UCL |
PMID:28131417 |
|
NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882
|
|
G |
MIR19A |
microRNA mir-19a |
acts_upstream_of |
ISO |
(PMID:27098600) |
BHF-UCL |
PMID:27098600 |
|
NCBI chr11:60,734,939...60,735,020
Ensembl chr11:60,734,939...60,735,020
|
|
G |
MIR19B-1 |
microRNA mir-19b-1 |
acts_upstream_of |
ISO |
(PMID:27098600) |
BHF-UCL |
PMID:27098600 |
|
NCBI chr11:60,735,238...60,735,317
Ensembl chr11:60,735,230...60,735,328
|
|
G |
MIR19B-2 |
microRNA mir-19b-2 |
acts_upstream_of |
ISO |
(PMID:27098600) |
BHF-UCL |
PMID:27098600 |
|
NCBI chr X:110,113,855...110,113,934
Ensembl chr X:110,113,855...110,113,934
|
|
G |
MIR27B |
microRNA mir-27b |
acts_upstream_of |
ISO |
(PMID:28095798) |
BHF-UCL |
PMID:28095798 |
|
NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056
|
|
G |
MIR9-1 |
microRNA mir-9-1 |
acts_upstream_of |
ISO |
(PMID:26315535) |
BHF-UCL |
PMID:26315535 |
|
NCBI chr 4:93,660,422...93,660,510
|
|
G |
MIR9-2 |
microRNA mir-9-2 |
acts_upstream_of |
ISO |
(PMID:26315535) |
BHF-UCL |
PMID:26315535 |
|
NCBI chr 2:96,076,352...96,076,438
|
|
G |
MIR9-3 |
microRNA mir-9-3 |
acts_upstream_of |
ISO |
(PMID:26315535) |
BHF-UCL |
PMID:26315535 |
|
NCBI chr 7:54,948,452...54,948,532
Ensembl chr 7:54,948,447...54,948,536
|
|
G |
MIR98 |
microRNA mir-98 |
acts_upstream_of |
ISO |
(PMID:28251559) |
BHF-UCL |
PMID:28251559 |
|
NCBI chr X:46,302,381...46,302,460
Ensembl chr X:46,302,381...46,302,460
|
|
G |
PPARG |
peroxisome proliferator activated receptor gamma |
involved_in |
ISO |
(PMID:25704091) |
BHF-UCL |
PMID:25704091 |
|
NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
|
|
G |
TGFBR3 |
transforming growth factor beta receptor 3 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,110,072...125,316,796
|
|
|
G |
ADTRP |
androgen dependent TFPI regulating protein |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:8,242,770...8,313,684
Ensembl chr 7:8,243,371...8,313,648
|
|
G |
NOTCH1 |
notch receptor 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
|
|
G |
TNFRSF1A |
TNF receptor superfamily member 1A |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,051...64,331,909
|
|
G |
TNFRSF1B |
TNF receptor superfamily member 1B |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:72,195,420...72,231,146
Ensembl chr 6:72,195,435...72,231,147
|
|
|
G |
CST3 |
cystatin C |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr17:30,471,056...30,474,486
Ensembl chr17:30,470,855...30,474,590
|
|
G |
DPP4 |
dipeptidyl peptidase 4 |
involved_in |
IEA ISS |
|
Ensembl UniProt |
|
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:68,661,764...68,742,961
Ensembl chr15:68,660,521...68,743,663
|
|
G |
FAP |
fibroblast activation protein alpha |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr15:68,831,281...68,902,416
Ensembl chr15:68,830,730...68,902,379
|
|
G |
MIR98 |
microRNA mir-98 |
involved_in |
ISO |
(PMID:26587789) |
ARUK-UCL |
PMID:26587789 |
|
NCBI chr X:46,302,381...46,302,460
Ensembl chr X:46,302,381...46,302,460
|
|
|
G |
FAP |
fibroblast activation protein alpha |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr15:68,831,281...68,902,416
Ensembl chr15:68,830,730...68,902,379
|
|
|
G |
CLASP1 |
cytoplasmic linker associated protein 1 |
involved_in |
ISO |
(PMID:23940118) |
UniProt |
PMID:23940118 |
|
NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734
|
|
G |
CLASP2 |
cytoplasmic linker associated protein 2 |
involved_in |
ISO |
(PMID:23940118) |
UniProt |
PMID:23940118 |
|
NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585
|
|
G |
DAG1 |
dystroglycan 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,522...32,092,450
|
|
G |
PHLDB1 |
pleckstrin homology like domain family B member 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:45,902,099...45,949,415
Ensembl chr 9:45,902,155...45,949,415
|
|
G |
PHLDB2 |
pleckstrin homology like domain family B member 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:147,778,420...148,025,943
Ensembl chr13:147,778,370...147,879,794
|
|
G |
PHLDB2 |
pleckstrin homology like domain family B member 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:148,033,712...148,087,766
Ensembl chr13:148,033,704...148,087,744
|
|
|
G |
COLGALT1 |
collagen beta(1-O)galactosyltransferase 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:60,138,303...60,166,751
Ensembl chr 2:60,138,306...60,162,632
|
|
G |
EFEMP2 |
EGF containing fibulin extracellular matrix protein 2 |
involved_in |
ISO |
(MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913) |
UniProt |
PMID:26178373 PMID:26220971 PMID:26711913 |
MGI:5660411 MGI:5695689 MGI:6158865 |
NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486
|
|
G |
RB1 |
RB transcriptional corepressor 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690
|
|
G |
TNXB |
tenascin XB |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:24,088,873...24,155,815
Ensembl chr 7:24,088,873...24,150,596
|
|
|
G |
AGT |
angiotensinogen |
involved_in acts_upstream_of |
IEA ISO |
(PMID:30729664) |
Ensembl BHF-UCL |
PMID:30729664 |
GO_REF:0000107 |
NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
|
|
G |
EMILIN1 |
elastin microfibril interfacer 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,917...112,046,429
|
|
G |
MAD2L2 |
mitotic arrest deficient 2 like 2 |
|
ISO |
|
RGD |
PMID:27488450 |
RGD:152995505 |
NCBI chr 6:71,773,680...71,779,192
Ensembl chr 6:71,773,682...71,779,183
|
|
G |
MIR27B |
microRNA mir-27b |
acts_upstream_of |
ISO |
(PMID:30729664) |
BHF-UCL |
PMID:30729664 |
|
NCBI chr10:27,079,963...27,080,042
Ensembl chr10:27,079,954...27,080,056
|
|
G |
RGCC |
regulator of cell cycle |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr11:25,481,845...25,496,548
Ensembl chr11:25,478,879...25,496,519
|
|
G |
SMAD3 |
SMAD family member 3 |
involved_in acts_upstream_of |
IEA ISO |
(PMID:30729664) |
Ensembl BHF-UCL |
PMID:30729664 |
GO_REF:0000107 |
NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,103...165,124,449
|
|
G |
SMAD4 |
SMAD family member 4 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:100,521,843...100,633,501
Ensembl chr 1:100,589,850...100,628,029
|
|
G |
SOX9 |
SRY-box transcription factor 9 |
involved_in acts_upstream_of_or_within |
IEA ISO |
(PMID:20881014) |
Ensembl MGI |
PMID:20881014 |
GO_REF:0000107 |
NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
|
|
G |
TGFB1 |
transforming growth factor beta 1 |
acts_upstream_of |
ISO |
(MGI:5775885|PMID:24279830) |
BHF-UCL |
PMID:24279830 |
MGI:5775885 |
NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,173...49,349,046
|
|
G |
TGFBR1 |
transforming growth factor beta receptor 1 |
acts_upstream_of involved_in |
ISO IEA |
(PMID:28251559) |
BHF-UCL Ensembl |
PMID:28251559 |
GO_REF:0000107 |
NCBI chr 1:240,842,735...240,918,267
Ensembl chr 1:240,860,156...240,918,528
|
|
|
G |
AGT |
angiotensinogen |
|
ISO |
|
RGD |
PMID:21419085 |
RGD:5129171 |
NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
|
|
G |
BMP2 |
bone morphogenetic protein 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,195
|
|
G |
CPB2 |
carboxypeptidase B2 |
|
ISO |
|
RGD |
PMID:23369837 |
RGD:7243115 |
NCBI chr11:21,234,447...21,298,250
Ensembl chr11:21,234,447...21,298,241
|
|
G |
IER3IP1 |
immediate early response 3 interacting protein 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:96,740,718...96,763,875
Ensembl chr 1:96,740,584...96,763,838
|
|
G |
RGCC |
regulator of cell cycle |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr11:25,481,845...25,496,548
Ensembl chr11:25,478,879...25,496,519
|
|
|
G |
CARMIL2 |
capping protein regulator and myosin 1 linker 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 6:28,265,130...28,277,649
Ensembl chr 6:28,265,135...28,277,641
|
|
G |
CLASP1 |
cytoplasmic linker associated protein 1 |
involved_in |
ISO |
(PMID:24859005) |
UniProt |
PMID:24859005 |
|
NCBI chr15:29,782,613...30,042,727
Ensembl chr15:29,782,746...30,042,734
|
|
G |
CLASP2 |
cytoplasmic linker associated protein 2 |
involved_in |
ISO |
(PMID:24859005) |
UniProt |
PMID:24859005 |
|
NCBI chr13:19,305,430...19,510,589
Ensembl chr13:19,305,181...19,510,585
|
|
G |
DDR2 |
discoidin domain receptor tyrosine kinase 2 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 4:87,749,738...87,911,818
Ensembl chr 4:87,756,168...87,911,296
|
|
G |
FSCN1 |
fascin actin-bundling protein 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 3:4,134,173...4,143,275
Ensembl chr 3:4,134,177...4,143,286
|
|
G |
IL6 |
interleukin 6 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 9:91,506,421...91,510,830
Ensembl chr 9:91,506,421...91,511,263
|
|
G |
MELTF |
melanotransferrin |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr13:133,094,869...133,122,092
Ensembl chr13:133,094,863...133,122,065
|
|
G |
PDPN |
podoplanin |
involved_in |
IEA |
|
Ensembl TreeGrafter |
|
GO_REF:0000107 GO_REF:0000118 |
NCBI chr 6:73,019,063...73,050,000
Ensembl chr 6:73,019,057...73,049,996
|
|
G |
TGFB2 |
transforming growth factor beta 2 |
involved_in |
ISO |
(MGI:5688835|PMID:21984612) |
UniProt |
PMID:21984612 |
MGI:5688835 |
NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,539...8,390,341
|
|
|
G |
ABL1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
|
ISO |
|
RGD |
PMID:19846571 |
RGD:8693597 |
NCBI chr 1:270,761,641...270,906,708
Ensembl chr 1:270,761,668...270,906,708
|
|
G |
CFLAR |
CASP8 and FADD like apoptosis regulator |
|
ISO |
|
RGD |
PMID:24691542 |
RGD:11341715 |
NCBI chr15:104,780,744...104,835,631
Ensembl chr15:104,781,616...104,835,630
|
|
G |
LOC110261221 |
cytochrome P450 2J2-like |
|
ISO |
|
RGD |
PMID:29656108 |
RGD:150520032 |
NCBI chr 6:152,321,816...152,358,179
Ensembl chr 6:152,321,848...152,648,979
|
|
G |
RB1 |
RB transcriptional corepressor 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,761...19,317,690
|
|
|
G |
AEBP1 |
AE binding protein 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr18:51,046,895...51,056,789
Ensembl chr18:51,046,899...51,056,698
|
|
G |
EFEMP2 |
EGF containing fibulin extracellular matrix protein 2 |
involved_in |
ISO |
(MGI:5776647|PMID:26690653) |
UniProt |
PMID:26690653 |
MGI:5776647 |
NCBI chr 2:6,455,155...6,463,493
Ensembl chr 2:6,450,332...6,463,486
|
|
G |
LOC100623720 |
collagen alpha-1(VI) chain |
acts_upstream_of_or_within |
ISO |
(PMID:20951202) |
MGI |
PMID:20951202 |
|
NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127
|
|
|
G |
AGT |
angiotensinogen |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
|
|
G |
NOTCH1 |
notch receptor 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
|
|
G |
SHAS2 |
hyaluronan synthase 2 |
|
ISO |
|
RGD |
PMID:27094859 |
RGD:12910548 |
NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,492...17,615,480
|
|
G |
TIE1 |
tyrosine kinase with immunoglobulin like and EGF like domains 1 |
acts_upstream_of involved_in |
ISO IEA |
(MGI:6370101|PMID:31319059) |
BHF-UCL Ensembl |
PMID:31319059 |
GO_REF:0000107 MGI:6370101 |
NCBI chr 6:167,919,662...167,947,253
Ensembl chr 6:167,919,668...167,940,870
|
|
|
G |
RIC1 |
RIC1 homolog, RAB6A GEF complex partner 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 1:216,382,179...216,494,815
Ensembl chr 1:216,382,128...216,494,793
|
|
|
G |
DDR1 |
discoidin domain receptor tyrosine kinase 1 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 7:23,371,358...23,391,585
Ensembl chr 7:23,373,845...23,391,584
|
|
G |
ETS1 |
ETS proto-oncogene 1, transcription factor |
|
ISO |
|
RGD |
PMID:16738537 |
RGD:2313717 |
NCBI chr 9:55,377,264...55,512,180
Ensembl chr 9:55,377,266...55,512,115
|
|
G |
FGFR4 |
fibroblast growth factor receptor 4 |
involved_in |
IEA |
|
Ensembl |
|
GO_REF:0000107 |
NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796
|
|
Term paths to the root
|