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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of proteolysis involved in protein catabolic process
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Accession:GO:1903050 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of proteolysis involved in cellular catabolic process.
Comment:overexpression of cathepsin C propeptide significantly increased the degradation of intestinal alkaline phosphatase (IAP)
Synonyms:exact_synonym: regulation of peptidolysis involved in cellular protein catabolic process;   regulation of peptidolysis involved in cellular protein catabolism;   regulation of proteolysis involved in cellular protein catabolic process
 related_synonym: regulation of peptidolysis during cellular protein catabolic process;   regulation of peptidolysis during cellular protein catabolism;   regulation of proteolysis during cellular protein catabolic process;   regulation of proteolysis during cellular protein catabolism


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negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:80,879,905...80,896,105
Ensembl chr10:80,879,909...80,896,015 		JBrowse link
G Svip small VCP/p97-interacting protein involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:51,646,909...51,655,766
Ensembl chr 7:51,646,919...51,655,766 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:9,993,615...10,030,149
Ensembl chr18:9,993,066...10,045,119 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in IMP (MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:3813160 NCBI chr 7:97,375,586...97,387,454
Ensembl chr 7:97,373,213...97,387,496 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:8,848,912...8,853,030
Ensembl chr19:8,848,860...8,853,227 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:76,810,573...76,913,671
Ensembl chr16:76,810,594...76,913,668 		JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate, delta-, dehydratase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:62,424,221...62,438,300
Ensembl chr 4:62,427,406...62,438,155 		JBrowse link
G F8a factor 8-associated gene A involved_in ISO (PMID:27815841) UniProt PMID:27815841 NCBI chr  X:72,271,912...72,274,401
Ensembl chr  X:72,271,897...72,274,401 		JBrowse link
G Gabarapl2 gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:112,667,335...112,679,547
Ensembl chr 8:112,667,335...112,680,244 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 involved_in IMP
ISO		 (MGI:6148636|PMID:17517623) ARUK-UCL
MGI		 PMID:17517623 GO_REF:0000096 MGI:4417868 MGI:6148636 NCBI chr17:45,878,704...45,884,187
Ensembl chr17:45,878,701...45,884,197 		JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:19,472,131...19,525,115
Ensembl chr16:19,472,128...19,525,125 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:60,040,086...60,079,555
Ensembl chr 2:60,040,231...60,081,020 		JBrowse link
G Ophn1 oligophrenin 1 involved_in IDA
IBA		 (MGI:5303043|PMID:21874017)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central		 PMID:21873635 PMID:21874017 MGI:5303043 MGI:6201960 NCBI chr  X:97,597,886...97,934,691
Ensembl chr  X:97,597,883...97,934,631 		JBrowse link
G Prkcg protein kinase C, gamma involved_in IMP (MGI:5467682|PMID:23185022) UniProt PMID:23185022 MGI:5467682 NCBI chr 7:3,352,038...3,379,615
Ensembl chr 7:3,337,704...3,379,615 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:95,301,568...95,328,483
Ensembl chr 8:95,300,766...95,328,625 		JBrowse link
G Psmf1 proteasome (prosome, macropain) inhibitor subunit 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:151,557,982...151,586,114
Ensembl chr 2:151,557,732...151,586,106 		JBrowse link
G Sco1 SCO1 cytochrome c oxidase assembly protein acts_upstream_of_or_within IMP (MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:5643882 NCBI chr11:66,943,473...66,958,270
Ensembl chr11:66,943,496...66,957,896 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IDA (MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:5614537 NCBI chr 9:108,367,806...108,379,536
Ensembl chr 9:108,367,801...108,379,536 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BCL2-associated athanogene 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:111,675,922...111,679,690
Ensembl chr12:111,675,922...111,679,691 		JBrowse link
G Bag6 BCL2-associated athanogene 6 involved_in IMP (MGI:3808636|PMID:18678708) UniProt PMID:18678708 MGI:3808636 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298 		JBrowse link
G Caml calcium modulating ligand involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:55,770,818...55,780,229
Ensembl chr13:55,770,818...55,780,224 		JBrowse link
G Ccar2 cell cycle activator and apoptosis regulator 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:70,375,617...70,391,272
Ensembl chr14:70,375,613...70,391,260 		JBrowse link
G Clec16a C-type lectin domain family 16, member A acts_upstream_of_or_within IMP (MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:5603233 NCBI chr16:10,363,173...10,562,742
Ensembl chr16:10,363,203...10,562,742 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:130,495,955...130,506,549
Ensembl chr 2:130,495,880...130,506,579 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:51,649,956...51,728,901
Ensembl chr15:51,649,954...51,728,919 		JBrowse link
G Fhit fragile histidine triad gene involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:11,307,679...12,919,681
Ensembl chr14:11,307,738...12,919,681 		JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in IDA (MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:3807767 NCBI chr 8:84,376,037...84,391,418
Ensembl chr 8:84,379,306...84,391,323 		JBrowse link
G Hfe homeostatic iron regulator involved_in IC (MGI:5603002|PMID:24904118) BHF-UCL PMID:24904118 MGI:5603002 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chr17:45,878,704...45,884,187
Ensembl chr17:45,878,701...45,884,197 		JBrowse link
G Klhl40 kelch-like 40 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (MGI:5586592|PMID:24960163)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:21873635 PMID:24960163 MGI:5586592 MGI:6201960 NCBI chr 9:121,606,673...121,612,885
Ensembl chr 9:121,606,673...121,612,884 		JBrowse link
G Map1a microtubule-associated protein 1 A involved_in IDA (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chr 2:121,119,608...121,141,313
Ensembl chr 2:121,120,081...121,141,313 		JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of_or_within IMP (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in IBA
IDA		 (MGI:6201960|PMID:21873635)
(MGI:3829128|PMID:17592138)		 GO_Central
UniProt		 PMID:17592138 PMID:21873635 MGI:3829128 MGI:6201960 NCBI chr 8:87,567,764...87,612,489
Ensembl chr 8:87,534,788...87,611,886 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:15,671,760...15,680,033
Ensembl chr 7:15,670,108...15,679,999 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957 		JBrowse link
G Park7 Parkinson disease (autosomal recessive, early onset) 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:150,981,590...150,994,378
Ensembl chr 4:150,981,590...150,998,894 		JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within IMP (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chr14:66,043,337...66,055,271
Ensembl chr14:66,043,286...66,055,271 		JBrowse link
G Phf20l1 PHD finger protein 20-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:66,449,354...66,519,821
Ensembl chr15:66,449,409...66,519,825 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in IMP (MGI:5897550|PMID:21804542) UniProt PMID:21804542 MGI:5897550 NCBI chr 4:135,776,665...135,780,704
Ensembl chr 4:135,755,576...135,780,739 		JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:100,205,526...100,264,319
Ensembl chr 6:100,205,526...100,264,446 		JBrowse link
G Rybp-ps RING1 and YY1 binding protein, pseudogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:66,155,454...66,159,835
Ensembl chr13:66,155,551...66,156,231 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:6,365,654...6,396,122
Ensembl chr 4:6,365,650...6,408,423 		JBrowse link
G Senp1 SUMO1/sentrin specific peptidase 1 acts_upstream_of_or_within IMP (MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:3818351 NCBI chr15:97,936,625...97,991,625
Ensembl chr15:97,936,625...97,991,625 		JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:3624046 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within IMP
IDA		 (MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:5310666 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:100,787,851...100,792,568
Ensembl chr13:100,788,087...100,792,568
Ensembl chr13:100,788,087...100,792,568 		JBrowse link
G Tlk2 tousled-like kinase 2 (Arabidopsis) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:105,066,869...105,174,785
Ensembl chr11:105,069,633...105,174,785 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr17:36,569,764...36,582,896
Ensembl chr17:36,569,765...36,583,139 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within IMP (MGI:6362140|PMID:31537781) MGI PMID:31537781 MGI:6362140 NCBI chr 9:44,710,697...44,714,248
Ensembl chr 9:44,710,694...44,714,369 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr19:8,848,912...8,853,030
Ensembl chr19:8,848,860...8,853,227 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:8,506,586...8,574,931
Ensembl chr16:8,507,459...8,610,172 		JBrowse link
G Usp9x ubiquitin specific peptidase 9, X chromosome involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:12,937,221...13,039,567
Ensembl chr  X:12,937,737...13,039,567 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:7,868,614...7,929,028
Ensembl chr18:7,868,832...7,929,028 		JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within		 ISO
IDA		 (MGI:5468878|PMID:23277542) MGI PMID:23277542 GO_REF:0000096 MGI:4834177 MGI:5468878 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Efna1 ephrin A1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:89,179,037...89,188,258
Ensembl chr 3:89,179,040...89,188,449 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:77,343,819...77,491,763
Ensembl chr 1:77,343,822...77,491,725 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l poly(A)binding protein nuclear 1-like acts_upstream_of_or_within IDA (MGI:6509513|PMID:32558204) MGI PMID:32558204 MGI:6509513 NCBI chr 8:123,346,210...123,349,474
Ensembl chr 8:123,346,210...123,349,478 		JBrowse link
G Styx serine/threonine/tyrosine interaction protein involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:45,588,534...45,614,608
Ensembl chr14:45,588,550...45,660,277 		JBrowse link
G Styx-ps serine/threonine/tyrosine interacting protein, pseudogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:67,864,699...67,868,924
Ensembl chr  X:67,864,699...67,868,924 		JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1 ankyrin repeat and SAM domain containing 1 acts_upstream_of_or_within IDA (MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:4461099 NCBI chr17:28,128,273...28,281,753
Ensembl chr17:28,128,280...28,281,749 		JBrowse link
G Cdkn2a cyclin dependent kinase inhibitor 2A acts_upstream_of_or_within
involved_in		 IDA
ISO		 (MGI:5468878|PMID:23277542) MGI PMID:23277542 GO_REF:0000096 MGI:4834177 MGI:5468878 NCBI chr 4:89,192,710...89,212,856
Ensembl chr 4:89,192,708...89,212,890 		JBrowse link
G Csnk2a1 casein kinase 2, alpha 1 polypeptide involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chr 2:152,068,468...152,123,772
Ensembl chr 2:152,068,759...152,123,772 		JBrowse link
G Csnk2a2 casein kinase 2, alpha prime polypeptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:96,172,724...96,215,505
Ensembl chr 8:96,172,724...96,216,667 		JBrowse link
G Hfe homeostatic iron regulator involved_in IC
ISO		 (MGI:5603002|PMID:24904118) BHF-UCL
MGI		 PMID:24904118 GO_REF:0000096 MGI:4834177 MGI:5603002 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:38,664,447...38,853,236
Ensembl chr 6:38,671,325...38,853,099 		JBrowse link
G Pdcl3 phosducin-like 3 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 1:39,026,895...39,036,317
Ensembl chr 1:39,024,689...39,036,319 		JBrowse link
G Pml promyelocytic leukemia involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:58,124,462...58,157,077
Ensembl chr 9:58,125,359...58,157,069 		JBrowse link
G Prmt6 protein arginine N-methyltransferase 6 involved_in IDA (MGI:5688415|PMID:26070566) UniProt PMID:26070566 MGI:5688415 NCBI chr 3:110,153,420...110,158,315
Ensembl chr 3:110,153,425...110,158,314 		JBrowse link
G Psen1 presenilin 1 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO
IMP		 (MGI:6277293|PMID:30683861) MGI
UniProt		 PMID:30683861 GO_REF:0000096 MGI:4834177 MGI:6277293 NCBI chr11:116,332,149...116,357,092
Ensembl chr11:116,332,151...116,357,067 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:135,776,665...135,780,704
Ensembl chr 4:135,755,576...135,780,739 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:97,668,352...97,673,265
Ensembl chr11:97,668,353...97,673,263 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:108,048,388...108,056,871
Ensembl chr 5:108,048,368...108,056,871 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:28,680,846...28,685,952
Ensembl chr12:28,680,853...28,685,952 		JBrowse link
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:80,879,905...80,896,105
Ensembl chr10:80,879,909...80,896,015 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within IGI (MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:4355593 NCBI chr19:46,385,335...46,477,243
Ensembl chr19:46,385,335...46,477,243 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chr  X:100,576,335...100,644,635
Ensembl chr  X:100,576,340...100,645,395 		JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:36,569,764...36,582,896
Ensembl chr17:36,569,765...36,583,139 		JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 acts_upstream_of_or_within IDA (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718 		JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:118,290,098...118,294,540
Ensembl chr 4:118,290,098...118,294,549 		JBrowse link
G Cdc20b cell division cycle 20B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:113,171,514...113,257,553
Ensembl chr13:113,171,645...113,227,729 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:81,202,713...81,214,204
Ensembl chr10:81,202,056...81,214,350 		JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:72,729,784...72,761,421
Ensembl chr  X:72,729,784...72,759,781 		JBrowse link
G Cav1 caveolin 1, caveolae protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451 		JBrowse link
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:95,113,057...95,121,999
Ensembl chr 8:95,113,066...95,122,005 		JBrowse link
G Sgta small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:80,879,905...80,896,105
Ensembl chr10:80,879,909...80,896,015 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:58,323,970...58,363,467
Ensembl chr13:58,323,970...58,363,467 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:152,281,228...152,284,558
Ensembl chr  X:152,281,223...152,284,566 		JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:101,885,160...101,928,139
Ensembl chr12:101,885,160...101,924,505 		JBrowse link
G Bag6 BCL2-associated athanogene 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298 		JBrowse link
G Eif2a eukaryotic translation initiation factor 2A involved_in TAS (MGI:4999711|PMID:19911006) MGI PMID:19911006 MGI:4999711 NCBI chr 3:58,433,252...58,464,922
Ensembl chr 3:58,433,242...58,464,922 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in TAS (MGI:4999711|PMID:19911006) MGI PMID:19911006 MGI:4999711 NCBI chr 6:70,821,468...70,882,225
Ensembl chr 6:70,821,499...70,882,229 		JBrowse link
G Ern1 endoplasmic reticulum (ER) to nucleus signalling 1 involved_in TAS (MGI:4999711|PMID:19911006) MGI PMID:19911006 MGI:4999711 NCBI chr11:106,285,474...106,378,701
Ensembl chr11:106,285,476...106,378,678 		JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:3,365,973...3,402,956
Ensembl chr11:3,365,982...3,402,363 		JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:86,375,483...86,389,833
Ensembl chr11:86,375,483...86,389,851 		JBrowse link
G Rnft2 ring finger protein, transmembrane 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 5:118,328,799...118,388,518
Ensembl chr 5:118,328,801...118,383,181 		JBrowse link
G Tmem259 transmembrane protein 259 involved_in IDA
IBA		 (MGI:5648655|PMID:25977983)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central		 PMID:21873635 PMID:25977983 MGI:5648655 MGI:6201960 NCBI chr10:79,812,954...79,820,159
Ensembl chr10:79,810,782...79,820,164 		JBrowse link
G Tmem67 transmembrane protein 67 involved_in ISO RGD
MGI		 PMID:19815549 GO_REF:0000096 MGI:4417868 RGD:8554391 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,355...12,090,020 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 (isopeptidase T-3) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:32,870,432...32,992,224
Ensembl chr 3:32,871,695...32,992,220 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in TAS
IMP		 (MGI:4999711|PMID:19911006) MGI PMID:19911006 MGI:4999711 NCBI chr 5:37,123,448...37,146,326
Ensembl chr 5:37,123,448...37,146,549 		JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BCL2-associated athanogene 2 involved_in IGI (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chr 1:33,784,565...33,796,831
Ensembl chr 1:33,784,565...33,796,876 		JBrowse link
G Dab2ip disabled 2 interacting protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:35,448,285...35,621,006
Ensembl chr 2:35,448,278...35,621,006 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:130,495,955...130,506,549
Ensembl chr 2:130,495,880...130,506,579 		JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator involved_in
acts_upstream_of_or_within		 IBA
ISO		 (MGI:6201960|PMID:21873635)
(MGI:3845680|PMID:19416853)		 GO_Central
MGI		 PMID:19416853 PMID:21873635 MGI:3845680 MGI:6201960 NCBI chr18:35,846,139...35,855,460
Ensembl chr18:35,846,139...35,855,409 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 involved_in IMP
ISO		 (MGI:5543313|PMID:23858059) ParkinsonsUK-UCL
MGI		 PMID:23858059 GO_REF:0000096 MGI:4834177 MGI:5543313 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in IDA (MGI:5770038|PMID:24709664) UniProt PMID:24709664 MGI:5770038 NCBI chr  X:67,722,144...67,761,569
Ensembl chr  X:67,722,147...67,761,569 		JBrowse link
G Kcne2 potassium voltage-gated channel, Isk-related subfamily, gene 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:92,089,277...92,095,021
Ensembl chr16:92,089,277...92,095,017 		JBrowse link
G Nupr1 nuclear protein transcription regulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:126,222,418...126,224,642
Ensembl chr 7:126,222,421...126,230,033 		JBrowse link
G Osbpl7 oxysterol binding protein-like 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:96,941,459...96,959,730
Ensembl chr11:96,941,454...96,959,730 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:11,059,227...12,282,257
Ensembl chr17:11,059,271...12,282,248 		JBrowse link
G Rnf40 ring finger protein 40 involved_in ISO RGD
MGI		 PMID:12121982 GO_REF:0000096 MGI:4417868 RGD:633892 NCBI chr 7:127,187,870...127,202,777
Ensembl chr 7:127,187,939...127,203,971 		JBrowse link
G Tmtc3 transmembrane and tetratricopeptide repeat containing 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:100,279,764...100,323,230
Ensembl chr10:100,279,764...100,323,212 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IMP (MGI:6150565|PMID:29518356) ARUK-UCL PMID:29518356 MGI:6150565 NCBI chr17:48,653,429...48,659,304
Ensembl chr17:48,653,429...48,661,175 		JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within IDA (MGI:4946566|PMID:21317886) MGI PMID:21317886 MGI:4946566 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 thymoma viral proto-oncogene 1 acts_upstream_of_or_within
involved_in		 IMP
ISO		 (MGI:3589701|PMID:15937334) MGI PMID:15937334 GO_REF:0000096 MGI:3589701 MGI:4834177 NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318 		JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:3,739,999...3,853,124
Ensembl chr 5:3,740,000...3,852,925 		JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:59,295,837...59,395,469
Ensembl chr 9:59,295,541...59,393,901 		JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:108,480,141...108,531,917
Ensembl chr 9:108,480,141...108,526,585 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP (MGI:5465208|PMID:23152632) MGI PMID:23152632 MGI:5465208 NCBI chr 6:114,620,075...114,837,565
Ensembl chr 6:114,620,058...114,837,575 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within IMP (MGI:3697244|PMID:17060449) MGI PMID:17060449 MGI:3697244 NCBI chr 2:172,198,110...172,212,820
Ensembl chr 2:172,198,110...172,212,455 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (MGI:3628833|PMID:16601693)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:16601693 PMID:21873635 MGI:3628833 MGI:6201960 NCBI chr17:26,350,294...26,414,784
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Axin2 axin 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Bag2 BCL2-associated athanogene 2 NOT|involved_in IGI (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chr 1:33,784,565...33,796,831
Ensembl chr 1:33,784,565...33,796,876 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 (human) acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 translocation partner 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:123,351,875...123,426,069
Ensembl chr 8:123,351,880...123,425,848 		JBrowse link
G Chfr checkpoint with forkhead and ring finger domains acts_upstream_of_or_within IDA (MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:5310666 NCBI chr 5:110,283,599...110,319,839
Ensembl chr 5:110,283,708...110,319,838 		JBrowse link
G Clu clusterin involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr14:66,205,932...66,218,997
Ensembl chr14:66,205,932...66,218,996 		JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:159,059,734...159,182,442
Ensembl chr 1:159,059,890...159,175,210 		JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:61,687,307...61,723,391
Ensembl chr18:61,688,345...61,723,132 		JBrowse link
G Csnk1d casein kinase 1, delta involved_in IMP
IBA		 (MGI:3849793|PMID:19414593)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central		 PMID:19414593 PMID:21873635 MGI:3849793 MGI:6201960 NCBI chr11:120,848,535...120,882,180
Ensembl chr11:120,849,816...120,882,156 		JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in IMP
IBA		 (MGI:3849793|PMID:19414593)
(MGI:6201960|PMID:21873635)		 UniProt
GO_Central		 PMID:19414593 PMID:21873635 MGI:3849793 MGI:6201960 NCBI chr15:79,302,054...79,339,779
Ensembl chr15:79,302,056...79,339,767 		JBrowse link
G Dab2 disabled 2, mitogen-responsive phosphoprotein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:6,329,269...6,470,196
Ensembl chr15:6,329,269...6,470,193 		JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:71,921,816...71,928,743
Ensembl chr 8:71,921,843...71,928,742 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:130,495,955...130,506,549
Ensembl chr 2:130,495,880...130,506,579 		JBrowse link
G Det1 de-etiolated homolog 1 (Arabidopsis) involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:78,471,293...78,497,272
Ensembl chr 7:78,471,295...78,497,011 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:75,213,039...75,222,336
Ensembl chr 1:75,213,050...75,222,336 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chr 4:155,931,829...155,943,760
Ensembl chr 4:155,931,859...155,943,760 		JBrowse link
G E330034G19Rik RIKEN cDNA E330034G19 gene acts_upstream_of_or_within IDA (MGI:5466764|PMID:23429752) MGI PMID:23429752 MGI:5466764 NCBI chr14:24,343,282...24,360,028
Ensembl chr14:24,344,762...24,348,165
Ensembl chr14:24,344,762...24,348,165 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (MGI:3840749|PMID:19319192)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:19319192 PMID:21873635 MGI:3840749 MGI:6201960 NCBI chr 9:55,116,219...55,131,717
Ensembl chr 9:55,116,209...55,131,717 		JBrowse link
G Gabarap gamma-aminobutyric acid receptor associated protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:69,882,196...69,885,775
Ensembl chr11:69,881,969...69,885,777 		JBrowse link
G Gba glucosidase, beta, acid involved_in IMP (MGI:5501380|PMID:23707074) ParkinsonsUK-UCL PMID:23707074 MGI:5501380 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within IMP (MGI:3695876|PMID:17189825) MGI PMID:17189825 MGI:3695876 NCBI chr 9:77,661,817...77,701,771
Ensembl chr 9:77,661,817...77,701,767 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:24,927,683...24,937,276
Ensembl chr 7:24,927,683...24,937,276 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within		 ISO
IGI		 (MGI:5437589|PMID:22660580) MGI PMID:22660580 GO_REF:0000096 MGI:4834177 MGI:5437589 NCBI chr16:37,909,363...38,066,446
Ensembl chr16:37,909,363...38,066,446 		JBrowse link
G Hspa1a heat shock protein 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:35,188,335...35,191,132
Ensembl chr17:35,188,166...35,191,132 		JBrowse link
G Hspa1b heat shock protein 1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:35,175,405...35,178,214
Ensembl chr17:35,175,412...35,178,214 		JBrowse link
G Hspbp1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:4,663,514...4,688,218
Ensembl chr 7:4,663,520...4,688,067 		JBrowse link
G Il33 interleukin 33 acts_upstream_of_or_within IDA
IGI		 (MGI:5437589|PMID:22660580) MGI PMID:22660580 MGI:5437589 NCBI chr19:29,902,513...29,938,118
Ensembl chr19:29,902,514...29,938,118 		JBrowse link
G Klhl40 kelch-like 40 involved_in IDA (MGI:5700633|PMID:25940086) UniProt PMID:25940086 MGI:5700633 NCBI chr 9:121,606,673...121,612,885
Ensembl chr 9:121,606,673...121,612,884 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IMP (MGI:4454597|PMID:20457918) BHF-UCL PMID:20457918 MGI:4454597 NCBI chr15:91,556,994...91,700,327
Ensembl chr15:91,557,378...91,700,323 		JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
G Nkd2 naked cuticle 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:73,966,653...73,995,750
Ensembl chr13:73,966,653...73,995,750 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO
IMP		 (MGI:5897550|PMID:21804542) MGI
UniProt		 PMID:21804542 GO_REF:0000096 MGI:4834177 MGI:5897550 NCBI chr 7:15,671,760...15,680,033
Ensembl chr 7:15,670,108...15,679,999 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:24,890,813...24,915,376
Ensembl chr 5:24,890,530...24,915,376 		JBrowse link
G Pabir1 PP2A A alpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:24,451,270...24,454,819
Ensembl chr19:24,453,866...24,454,720 		JBrowse link
G Pias1 protein inhibitor of activated STAT 1 involved_in IMP (MGI:5487503|PMID:22406621) UniProt PMID:22406621 MGI:5487503 NCBI chr 9:62,785,648...62,888,161
Ensembl chr 9:62,785,650...62,895,206 		JBrowse link
G Plk1 polo like kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:121,758,658...121,769,107
Ensembl chr 7:121,758,662...121,769,096 		JBrowse link
G Plk2 polo like kinase 2 involved_in ISO RGD
MGI		 PMID:18723513 GO_REF:0000096 MGI:4417868 RGD:7241135 NCBI chr13:110,531,578...110,537,378
Ensembl chr13:110,531,580...110,537,378 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
IMP		 (MGI:6201960|PMID:21873635)
(MGI:5543313|PMID:23858059)		 GO_Central
ParkinsonsUK-UCL		 PMID:21873635 PMID:23858059 MGI:5543313 MGI:6201960 NCBI chr17:11,059,227...12,282,257
Ensembl chr17:11,059,271...12,282,248 		JBrowse link
G Psen1 presenilin 1 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973 		JBrowse link
G Psen2 presenilin 2 involved_in IMP (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003 		JBrowse link
G Psmd10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:139,849,174...139,857,460
Ensembl chr  X:139,849,178...139,857,477 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:48,691,187...48,697,068
Ensembl chr11:48,691,159...48,697,261 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:85,561,540...85,567,361
Ensembl chr 8:85,560,648...85,567,294 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:81,350,517...81,360,570
Ensembl chr15:81,350,497...81,360,570 		JBrowse link
G Rbx1-ps ring-box 1, pseudogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:36,246,354...36,246,897
Ensembl chr17:36,246,516...36,246,842 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:92,096,701...92,111,004
Ensembl chr 5:92,096,763...92,110,927 		JBrowse link
G Rnf14 ring finger protein 14 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:38,410,513...38,450,905
Ensembl chr18:38,417,590...38,450,902 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:26,356,796...26,465,296
Ensembl chr12:26,350,963...26,465,253 		JBrowse link
G Rnf144b ring finger protein 144B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:47,276,196...47,401,470
Ensembl chr13:47,276,132...47,401,467 		JBrowse link
G Rnf180 ring finger protein 180 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:18363970 PMID:21873635 PMID:23926250 MGI:3819024 MGI:5505713 MGI:6201960 NCBI chr13:105,267,075...105,431,406
Ensembl chr13:105,266,509...105,431,323 		JBrowse link
G Rnf19a ring finger protein 19A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:36,240,080...36,283,293
Ensembl chr15:36,240,079...36,283,293 		JBrowse link
G Rnf19b ring finger protein 19B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:128,951,871...128,978,319
Ensembl chr 4:128,952,064...128,979,679 		JBrowse link
G Rnf217 ring finger protein 217 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:31,377,883...31,485,721
Ensembl chr10:31,369,189...31,485,180 		JBrowse link
G Sh3rf1 SH3 domain containing ring finger 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:61,677,117...61,918,327
Ensembl chr 8:61,676,906...61,849,105 		JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:6201960 NCBI chr18:42,185,531...42,291,760
Ensembl chr18:42,186,732...42,292,025 		JBrowse link
G Sh3rf3 SH3 domain containing ring finger 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:58,649,181...58,974,738
Ensembl chr10:58,649,181...58,974,738 		JBrowse link
G Sirt2 sirtuin 2 involved_in IMP (MGI:5574427|PMID:24681946) UniProt PMID:24681946 MGI:5574427 NCBI chr 7:28,466,192...28,488,086
Ensembl chr 7:28,466,160...28,488,086 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Socs4 suppressor of cytokine signaling 4 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr14:47,514,377...47,533,559
Ensembl chr14:47,514,388...47,533,559 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:87,414,707...87,445,153
Ensembl chr17:87,415,107...87,445,267 		JBrowse link
G Stub1 STIP1 homology and U-Box containing protein 1 involved_in ISO
ISS		 (MGI:1890114|PMID:10330192) MGI
HGNC-UCL		 PMID:10330192 GO_REF:0000096 MGI:1890114 MGI:4834177 NCBI chr17:26,049,608...26,051,893
Ensembl chr17:26,049,479...26,052,378 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:59,678,593...59,709,993
Ensembl chr 1:59,625,717...59,709,993 		JBrowse link
G Sumo2 small ubiquitin-like modifier 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,413,935...115,427,056
Ensembl chr11:115,413,928...115,427,102 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) BHF-UCL PMID:15053879 NCBI chr  X:100,576,335...100,644,635
Ensembl chr  X:100,576,340...100,645,395 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IBA
IDA		 (MGI:6201960|PMID:21873635)
(MGI:4457446|PMID:20410507)		 GO_Central
BHF-UCL		 PMID:20410507 PMID:21873635 MGI:4457446 MGI:6201960 NCBI chr15:59,520,503...59,528,948
Ensembl chr15:59,520,199...59,528,948 		JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in IDA
IBA		 (MGI:4457446|PMID:20410507)
(MGI:6201960|PMID:21873635)		 BHF-UCL
GO_Central		 PMID:20410507 PMID:21873635 MGI:4457446 MGI:6201960 NCBI chr12:15,841,726...15,867,034
Ensembl chr12:15,841,728...15,866,923 		JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in TAS
IBA		 (MGI:4457446|PMID:20410507)
(MGI:6201960|PMID:21873635)		 BHF-UCL
GO_Central		 PMID:20410507 PMID:21873635 MGI:4457446 MGI:6201960 NCBI chr 2:152,179,345...152,185,980
Ensembl chr 2:152,179,342...152,185,952 		JBrowse link
G Ube2v2 ubiquitin-conjugating enzyme E2 variant 2 involved_in ISO RGD
MGI		 PMID:12750002 GO_REF:0000096 MGI:4417868 RGD:1299567 NCBI chr16:15,368,850...15,412,382
Ensembl chr16:15,369,941...15,413,637 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 (isopeptidase T) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:124,791,982...124,806,404
Ensembl chr 6:124,791,982...124,806,447 		JBrowse link
G Vcp valosin containing protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507 		JBrowse link
G Zer1 zyg-11 related, cell cycle regulator involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:29,987,295...30,016,299
Ensembl chr 2:29,987,295...30,014,597 		JBrowse link
G Zfand2a zinc finger, AN1-type domain 2A acts_upstream_of_or_within IMP (MGI:3663213|PMID:16973439) MGI PMID:16973439 MGI:3663213 NCBI chr 5:139,456,971...139,470,246
Ensembl chr 5:139,456,966...139,470,304 		JBrowse link
G Zyg11b zyg-ll family member B, cell cycle regulator involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:108,084,952...108,158,330
Ensembl chr 4:108,086,921...108,158,293 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:116,985,852...116,991,244
Ensembl chr 4:116,985,852...116,991,160 		JBrowse link
G Sirt2 sirtuin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:28,466,192...28,488,086
Ensembl chr 7:28,466,160...28,488,086 		JBrowse link
positive regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:132,257,866...132,262,784
Ensembl chr 4:132,257,866...132,260,970 		JBrowse link
G Ctsc cathepsin C involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:87,927,233...87,960,083
Ensembl chr 7:87,927,293...87,960,096 		JBrowse link
G Gba glucosidase, beta, acid involved_in ISO
IMP		 (MGI:5141165|PMID:21700325) MGI
ParkinsonsUK-UCL		 PMID:21700325 GO_REF:0000096 MGI:4834177 MGI:5141165 NCBI chr 3:89,110,235...89,119,944
Ensembl chr 3:89,110,235...89,116,273 		JBrowse link
G Laptm5 lysosomal-associated protein transmembrane 5 involved_in IMP (MGI:5444793|PMID:22949502) ARUK-UCL PMID:22949502 MGI:5444793 NCBI chr 4:130,640,627...130,663,459
Ensembl chr 4:130,640,436...130,663,452 		JBrowse link
G Rgn regucalcin involved_in ISO RGD
MGI		 PMID:1513338 GO_REF:0000096 MGI:4417868 RGD:9590188 NCBI chr  X:20,413,980...20,428,328
Ensembl chr  X:20,416,026...20,428,328 		JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD-40 domain protein 8 involved_in IDA (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chr 5:118,203,046...118,293,523
Ensembl chr 5:118,203,030...118,293,529 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IMP (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chr14:33,099,855...33,169,215
Ensembl chr14:33,099,855...33,169,115 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IMP (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chr11:49,737,558...49,777,248
Ensembl chr11:49,737,578...49,777,248 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein-like 4 acts_upstream_of_or_within IMP (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chr 4:110,254,823...111,521,521
Ensembl chr 4:110,254,858...111,521,521 		JBrowse link
G Agtpbp1 ATP/GTP binding protein 1 acts_upstream_of_or_within IMP (MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:6149282 NCBI chr13:59,597,348...59,705,184
Ensembl chr13:59,593,556...59,733,041 		JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within
involved_in		 IDA
ISO		 (MGI:3628833|PMID:16601693) MGI PMID:16601693 GO_REF:0000096 MGI:3628833 MGI:4417868 NCBI chr17:26,350,294...26,414,784
Ensembl chr17:26,357,662...26,414,785 		JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr  X:7,460,048...7,471,659
Ensembl chr  X:7,460,048...7,471,756 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chr11:96,798,251...96,807,359
Ensembl chr11:96,798,252...96,807,322 		JBrowse link
G Clu clusterin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:66,205,932...66,218,997
Ensembl chr14:66,205,932...66,218,996 		JBrowse link
G Disc1 disrupted in schizophrenia 1 acts_upstream_of_or_within IMP (MGI:4837265|PMID:20880836) MGI PMID:20880836 MGI:4837265 NCBI chr 8:125,773,928...125,991,882
Ensembl chr 8:125,780,934...125,988,597 		JBrowse link
G Egf epidermal growth factor involved_in IDA (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chr 3:129,471,223...129,548,971
Ensembl chr 3:129,471,214...129,548,965 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within IMP (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr 9:55,116,219...55,131,717
Ensembl chr 9:55,116,209...55,131,717 		JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 involved_in ISO
IMP		 (MGI:6282935|PMID:27238018) MGI
UniProt		 PMID:27238018 GO_REF:0000096 MGI:4834177 MGI:6282935 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505 		JBrowse link
G L3mbtl3 L3MBTL3 histone methyl-lysine binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:26,150,361...26,252,426
Ensembl chr10:26,150,366...26,251,967 		JBrowse link
G Laptm5 lysosomal-associated protein transmembrane 5 involved_in IMP
IDA		 (MGI:3803048|PMID:18619870)
(MGI:6478861|PMID:24638062)		 ARUK-UCL PMID:18619870 PMID:24638062 MGI:3803048 MGI:6478861 NCBI chr 4:130,640,627...130,663,459
Ensembl chr 4:130,640,436...130,663,452 		JBrowse link
G Magef1 MAGE family member F1 involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chr16:21,150,650...21,152,106
Ensembl chr16:21,150,643...21,152,139 		JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 involved_in IMP (MGI:5306293|PMID:18206965) UniProt PMID:18206965 MGI:5306293 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129 		JBrowse link
G Ptk2b PTK2 protein tyrosine kinase 2 beta involved_in IMP (MGI:4453113|PMID:19880522) UniProt PMID:19880522 MGI:4453113 NCBI chr14:66,390,706...66,518,549
Ensembl chr14:66,390,706...66,518,501 		JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:58,760,975...58,774,239
Ensembl chr15:58,761,078...58,778,906 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:144,813,305...144,902,657
Ensembl chr 5:144,813,305...144,902,657 		JBrowse link
G Sumo3 small ubiquitin-like modifier 3 acts_upstream_of_or_within IDA (MGI:3813414|PMID:18644859) MGI PMID:18644859 MGI:3813414 NCBI chr10:77,441,931...77,454,165
Ensembl chr10:77,441,931...77,454,165 		JBrowse link
G Trim67 tripartite motif-containing 67 acts_upstream_of_or_within IDA (MGI:5427306|PMID:22337885) MGI PMID:22337885 MGI:5427306 NCBI chr 8:125,518,056...125,561,452
Ensembl chr 8:125,519,831...125,561,452 		JBrowse link
G Vcp valosin containing protein involved_in ISO RGD
MGI		 PMID:16103111 GO_REF:0000096 MGI:4417868 RGD:1599730 NCBI chr 4:42,979,964...43,000,507
Ensembl chr 4:42,979,963...43,000,507 		JBrowse link
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 involved_in IMP
IBA		 (MGI:5613477|PMID:15147274)
(MGI:6201960|PMID:21873635)		 ParkinsonsUK-UCL
GO_Central		 PMID:15147274 PMID:21873635 MGI:5613477 MGI:6201960 NCBI chr 8:95,113,057...95,121,999
Ensembl chr 8:95,113,066...95,122,005 		JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp19 ubiquitin specific peptidase 19 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:108,367,806...108,379,536
Ensembl chr 9:108,367,801...108,379,536 		JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Btrc beta-transducin repeat containing protein acts_upstream_of_or_within
involved_in		 IDA
IBA		 (MGI:3835892|PMID:19103752)
(MGI:6201960|PMID:21873635)		 MGI
GO_Central		 PMID:19103752 PMID:21873635 MGI:3835892 MGI:6201960 NCBI chr19:45,352,119...45,521,782
Ensembl chr19:45,352,173...45,518,452 		JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr17:70,276,068...71,128,408
Ensembl chr17:70,276,068...71,128,408 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:72,863,574...72,880,971
Ensembl chr 9:72,866,067...72,880,346 		JBrowse link
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha acts_upstream_of_or_within IMP (MGI:5793002|PMID:27107699) MGI PMID:27107699 MGI:5793002 NCBI chr10:11,218,435...11,335,408
Ensembl chr10:11,219,148...11,335,388 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:108,216,279...108,217,541
Ensembl chr 9:108,216,102...108,217,542 		JBrowse link
G Nfe2l1 nuclear factor, erythroid derived 2,-like 1 acts_upstream_of_or_within IMP (MGI:5913760|PMID:27920251)
(MGI:6198859|PMID:29400713)		 MGI PMID:27920251 PMID:29400713 MGI:5913760 MGI:6198859 NCBI chr11:96,708,239...96,720,810
Ensembl chr11:96,708,240...96,720,794 		JBrowse link
G Nudt15 nudix hydrolase 15 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:73,756,320...73,785,682
Ensembl chr14:73,756,317...73,785,682 		JBrowse link
G Pithd1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1 acts_upstream_of_or_within IMP (MGI:6392185|PMID:31915251) MGI PMID:31915251 MGI:6392185 NCBI chr 4:135,702,913...135,714,555
Ensembl chr 4:135,702,771...135,714,575 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO
IMP		 (MGI:5461108|PMID:23001567) MGI PMID:23001567 GO_REF:0000008 MGI:2154458 MGI:5461108 NCBI chr17:24,767,657...24,815,457
Ensembl chr17:24,768,808...24,815,482 		JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072 		JBrowse link
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:61,542,038...61,630,720
Ensembl chr 2:61,542,038...61,630,720 		JBrowse link
G Psme1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:55,815,951...55,818,984
Ensembl chr14:55,815,580...55,818,986 		JBrowse link
G Psme2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:55,824,897...55,828,558
Ensembl chr14:55,824,898...55,828,570 		JBrowse link
G Psme3 proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki) involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:101,206,090...101,214,363
Ensembl chr11:101,207,039...101,214,363 		JBrowse link
G Rhbdf1 rhomboid 5 homolog 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:32,159,585...32,172,339
Ensembl chr11:32,159,585...32,172,300 		JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in IDA (MGI:5488886|PMID:16792503) UniProt PMID:16792503 MGI:5488886 NCBI chr 6:97,128,911...97,156,107
Ensembl chr 6:97,129,958...97,156,083 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO (MGI:3818156|PMID:17571083) MGI PMID:17571083 MGI:3818156 NCBI chr11:62,442,329...62,444,037
Ensembl chr11:62,441,997...62,444,039 		JBrowse link
G Uchl5 ubiquitin carboxyl-terminal esterase L5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:143,652,993...143,683,204
Ensembl chr 1:143,653,010...143,683,204 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr18:9,993,615...10,030,149
Ensembl chr18:9,993,066...10,045,119 		JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf Araf proto-oncogene, serine/threonine kinase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:20,663,946...20,726,760
Ensembl chr  X:20,664,053...20,726,758 		JBrowse link
G Commd1 COMM domain containing 1 involved_in IBA
ISO		 (MGI:6201960|PMID:21873635) GO_Central
MGI		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:22,849,728...22,934,539
Ensembl chr11:22,846,136...22,932,382 		JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:71,921,816...71,928,743
Ensembl chr 8:71,921,843...71,928,742 		JBrowse link
G Desi1 desumoylating isopeptidase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:81,876,724...81,900,364
Ensembl chr15:81,876,724...81,918,063 		JBrowse link
G Foxf2 forkhead box F2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Glmn glomulin, FKBP associated protein acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 5:107,696,828...107,745,754
Ensembl chr 5:107,696,833...107,745,754 		JBrowse link
G Gna12 guanine nucleotide binding protein, alpha 12 involved_in ISO
IMP		 (MGI:5448916|PMID:22609986) MGI
UniProt		 PMID:22609986 GO_REF:0000096 MGI:4834177 MGI:5448916 NCBI chr 5:140,745,699...140,816,186
Ensembl chr 5:140,744,163...140,816,186 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:85,561,540...85,567,361
Ensembl chr 8:85,560,648...85,567,294 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:55,350,042...55,392,237
Ensembl chr 4:55,350,043...55,392,237 		JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K acts_upstream_of_or_within IDA (MGI:3806928|PMID:18710920) MGI PMID:18710920 MGI:3806928 NCBI chr 5:65,694,588...65,756,332
Ensembl chr 5:65,694,576...65,756,331 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:88,460,984...88,477,032
Ensembl chr 3:88,461,065...88,477,032 		JBrowse link
G Ufl1 UFM1 specific ligase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000008 MGI:2154458 MGI:6201960 NCBI chr 4:25,247,149...25,281,821
Ensembl chr 4:25,248,600...25,281,821 		JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IDA
IMP		 (MGI:3820325|PMID:19056892) MGI PMID:19056892 MGI:3820325 NCBI chr15:98,668,593...98,676,093
Ensembl chr15:98,668,593...98,676,031 		JBrowse link
G Xpo1 exportin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:23,205,768...23,248,250
Ensembl chr11:23,206,041...23,248,249 		JBrowse link
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G L3mbtl3 L3MBTL3 histone methyl-lysine binding protein involved_in IMP (MGI:7387162|PMID:30442713) UniProt PMID:30442713 MGI:7387162 NCBI chr10:26,150,361...26,252,426
Ensembl chr10:26,150,366...26,251,967 		JBrowse link
G Lats1 large tumor suppressor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:7,556,964...7,592,225
Ensembl chr10:7,556,978...7,592,224 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:24,890,813...24,915,376
Ensembl chr 5:24,890,530...24,915,376 		JBrowse link
G Ptk2b PTK2 protein tyrosine kinase 2 beta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:66,390,706...66,518,549
Ensembl chr14:66,390,706...66,518,501 		JBrowse link
G Tmem168 transmembrane protein 168 acts_upstream_of_or_within IMP (MGI:6511555|PMID:32175648) MGI PMID:32175648 MGI:6511555 NCBI chr 6:13,580,688...13,608,097
Ensembl chr 6:13,580,686...13,608,099 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in ISO
IBA		 (MGI:6201960|PMID:21873635) MGI
GO_Central		 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:58,871,891...58,960,585
Ensembl chr 7:58,878,498...58,961,284 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28775
    metabolic process 11619
      primary metabolic process 8509
        protein metabolic process 5402
          regulation of protein metabolic process 2744
            regulation of proteolysis 811
              regulation of proteolysis involved in protein catabolic process 236
                negative regulation of proteolysis involved in protein catabolic process + 74
                positive regulation of proteolysis involved in protein catabolic process + 137
                regulation of proteasomal protein catabolic process + 198
                regulation of proteolysis associated with antigen processing and presentation + 0
                regulation of ubiquitin-dependent protein catabolic process + 179
Path 2
Term Annotations click to browse term
  biological_process 28775
    metabolic process 11619
      nitrogen compound metabolic process 7844
        organonitrogen compound metabolic process 6403
          protein metabolic process 5402
            proteolysis 1887
              regulation of proteolysis 811
                regulation of proteolysis involved in protein catabolic process 236
                  negative regulation of proteolysis involved in protein catabolic process + 74
                  positive regulation of proteolysis involved in protein catabolic process + 137
                  regulation of proteasomal protein catabolic process + 198
                  regulation of proteolysis associated with antigen processing and presentation + 0
                  regulation of ubiquitin-dependent protein catabolic process + 179
paths to the root