ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of glycoprotein metabolic process
Accession: GO:1903018
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Definition: Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.
Comment: human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein
Synonyms: exact_synonym: regulation of glycoprotein metabolism
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Apcs
amyloid P component, serum
involved_in
IEA ISO
GO_REF:0000107 (PMID:23544079)
Ensembl RGD
PMID:23544079
GO_REF:0000107
NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
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Ptx3
pentraxin 3
involved_in
ISO
(PMID:23544079)
RGD
PMID:23544079
NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
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Aatf
apoptosis antagonizing transcription factor
acts_upstream_of_or_within
ISO
(MGI:3028747|PMID:14627703)
RGD
PMID:14627703
MGI:3028747
NCBI chr10:71,744,648...71,837,851
Ensembl chr10:71,744,659...71,837,851
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Abca7
ATP binding cassette subfamily A member 7
involved_in
ISS ISO
GO_REF:0000024 (MGI:5553242|PMID:18429932)
Alzheimers_University_of_Toronto RGD
PMID:18429932
GO_REF:0000024 MGI:5553242
NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
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Ago2
argonaute RISC catalytic component 2
involved_in
IMP
PMID:20395292
ARUK-UCL
PMID:20395292
RGD:14390059
NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
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Bace2
beta-secretase 2
involved_in
ISO ISS
(PMID:12801932) GO_REF:0000024
RGD UniProt
PMID:12801932
GO_REF:0000024
NCBI chr11:37,798,397...37,880,624
Ensembl chr11:37,798,370...37,880,821
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Itm2a
integral membrane protein 2A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:78,490,872...78,496,814
Ensembl chr X:78,490,866...78,496,847
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Itm2b
integral membrane protein 2B
involved_in
ISO IBA ISS
(PMID:16027166), (PMID:18524908) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:16027166 PMID:18524908 , PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr15:55,254,703...55,277,713
Ensembl chr15:55,254,706...55,277,713
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Itm2c
integral membrane protein 2C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:92,916,469...92,930,306
Ensembl chr 9:92,916,469...92,930,279
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Acot8
acyl-CoA thioesterase 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:9153233)
UniProt Ensembl RGD
PMID:9153233
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:161,260,837...161,272,495
Ensembl chr 3:161,259,735...161,272,460
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Hbegf
heparin-binding EGF-like growth factor
involved_in
IDA
PMID:12882762
UniProt
PMID:12882762
RGD:8554842
NCBI chr18:29,330,302...29,340,185
Ensembl chr18:29,329,764...29,340,403
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Cst3
cystatin C
involved_in
ISO
(PMID:10545518)
RGD
PMID:10545518
NCBI chr 3:143,219,671...143,223,544
Ensembl chr 3:143,219,686...143,223,615
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Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3655405|PMID:9498750)
BHF-UCL RGD
PMID:9498750
GO_REF:0000024 MGI:3655405
NCBI chr16:20,107,471...20,120,678
Ensembl chr16:20,109,200...20,120,668
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Apcs
amyloid P component, serum
involved_in
ISO
(PMID:23544079)
RGD
PMID:23544079
NCBI chr13:91,426,621...91,427,417
Ensembl chr13:91,426,479...91,427,575
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Ptx3
pentraxin 3
involved_in
ISO
(PMID:23544079)
RGD
PMID:23544079
NCBI chr 2:158,097,843...158,103,653
Ensembl chr 2:158,097,843...158,103,653
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Mgat4d
MGAT4 family, member D
involved_in
ISO
(MGI:5887193|PMID:20805325)
RGD
PMID:20805325
MGI:5887193
NCBI chr19:24,494,366...24,534,039
Ensembl chr19:24,496,569...24,532,772
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Oga
O-GlcNAcase
IMP
RGD
PMID:16332679
RGD:2305959
NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
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Acer2
alkaline ceramidase 2
involved_in
ISO
(PMID:20089856)
RGD
PMID:20089856
NCBI chr 5:105,230,540...105,279,732
Ensembl chr 5:105,230,580...105,279,731
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Tmem59
transmembrane protein 59
involved_in
ISO
(PMID:20427278)
RGD
PMID:20427278
NCBI chr 5:126,783,061...126,804,177
Ensembl chr 5:126,783,061...126,804,175
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Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:16550171)
RGD
PMID:16550171
NCBI chr 3:162,182,156...162,194,610
Ensembl chr 3:162,181,974...162,194,804
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Abca2
ATP binding cassette subfamily A member 2
involved_in
ISO IEA
(PMID:20704561) GO_REF:0000107
RGD Ensembl
PMID:20704561
GO_REF:0000107
NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
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Ncstn
nicastrin
acts_upstream_of_or_within
ISO
(MGI:5569714|PMID:23826707)
RGD
PMID:23826707
MGI:5569714
NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
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Pawr
pro-apoptotic WT1 regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3028747|PMID:14627703)
Ensembl RGD
PMID:14627703
GO_REF:0000107 MGI:3028747
NCBI chr 7:51,273,764...51,353,700
Ensembl chr 7:51,273,771...51,353,068
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Soat1
sterol O-acyltransferase 1
involved_in
ISO IEA
(PMID:17412327) GO_REF:0000107
RGD Ensembl
PMID:17412327
GO_REF:0000107
NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783
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Plcb1
phospholipase C beta 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:4943410|PMID:15849202)
BHF-UCL Ensembl RGD
PMID:15849202
GO_REF:0000024 GO_REF:0000107 MGI:4943410
NCBI chr 3:127,721,244...128,419,565
Ensembl chr 3:128,155,069...128,419,545
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Il33
interleukin 33
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:6414704|PMID:26936882)
Ensembl RGD
PMID:26936882
GO_REF:0000107 MGI:6414704
NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
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Il33
interleukin 33
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:6414704|PMID:26936882)
Ensembl RGD
PMID:26936882
GO_REF:0000107 MGI:6414704
NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
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Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(MGI:3576832|PMID:15845453)
RGD
PMID:15845453
MGI:3576832
NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017
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Ccl21
C-C motif chemokine ligand 21
involved_in
ISO
(MGI:3576832|PMID:15845453)
RGD
PMID:15845453
MGI:3576832
NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782
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Ep300
E1A binding protein p300
IMP
fibronectin
RGD
PMID:17065349
RGD:2312275
NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
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Igf1
insulin-like growth factor 1
involved_in
ISO IEA
(PMID:9564845) GO_REF:0000107
RGD Ensembl
PMID:9564845
GO_REF:0000107
NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
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Insr
insulin receptor
IMP
P-glycoprotein
RGD
PMID:19049803
RGD:2307019
NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
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Ccr7
C-C motif chemokine receptor 7
involved_in
ISO
(MGI:3576832|PMID:15845453)
RGD
PMID:15845453
MGI:3576832
NCBI chr10:87,057,335...87,067,444
Ensembl chr10:87,057,136...87,067,456
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LOC100363782
RAB1B, member RAS oncogene family-like
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
Ensembl chr 1:220,480,834...220,491,469
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Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO
UniProtKB:Q9H0U4 (PMID:21680502)
RGD
PMID:21680502
NCBI chr14:104,475,082...104,500,176
Ensembl chr14:104,475,082...104,501,020
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Rab1b
RAB1B, member RAS oncogene family
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P62820 (PMID:21680502)
Ensembl RGD
PMID:21680502
GO_REF:0000107
NCBI chr 1:220,483,529...220,491,469
Ensembl chr 1:220,480,834...220,491,469
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Rab1b-ps1
RAB1B, member RAS oncogene family, pseudogene 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:220,480,828...220,491,456
Ensembl chr 1:220,480,834...220,491,469
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Ctnnb1
catenin beta 1
involved_in
ISO IEA ISS
(PMID:15853773) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15853773
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
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Pxylp1
2-phosphoxylose phosphatase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:24425863)
UniProt RGD
PMID:24425863
GO_REF:0000024
NCBI chr 8:104,724,728...104,790,639
Ensembl chr 8:104,724,743...104,790,639
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Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:15853773)
RGD
PMID:15853773
NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514 Ensembl chr 1:276,659,542...276,730,514
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Chp1
calcineurin-like EF-hand protein 1
involved_in
IDA
PMID:21543739
UniProt
PMID:21543739
RGD:8554239
NCBI chr 3:111,354,506...111,389,998
Ensembl chr 3:111,354,506...111,389,989
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Golga2
golgin A2
involved_in
ISO
(PMID:22735382)
RGD
PMID:22735382
NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458
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Ramp1
receptor activity modifying protein 1
involved_in
ISO
(PMID:9620797)
RGD
PMID:9620797
NCBI chr 9:98,313,632...98,364,206
Ensembl chr 9:98,313,632...98,364,205
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Slc51b
solute carrier family 51 subunit beta
involved_in
ISO
(MGI:5437400|PMID:22535958)
RGD
PMID:22535958
MGI:5437400
NCBI chr 8:70,930,196...70,938,559
Ensembl chr 8:70,930,347...70,932,986
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Arfgef1
ADP ribosylation factor guanine nucleotide exchange factor 1
involved_in
ISO ISS
(PMID:17227842) GO_REF:0000024
RGD UniProt
PMID:17227842
GO_REF:0000024
NCBI chr 5:8,666,046...8,760,458
Ensembl chr 5:8,666,200...8,760,458
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Il15
interleukin 15
acts_upstream_of_or_within
ISO
(MGI:5567847|PMID:24509081)
RGD
PMID:24509081
MGI:5567847
NCBI chr19:23,542,606...23,624,366
Ensembl chr19:23,542,889...23,554,594
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Pomt1
protein-O-mannosyltransferase 1
IDA
RGD
PMID:16704966
RGD:11532759
NCBI chr 3:11,253,424...11,271,873
Ensembl chr 3:11,254,026...11,271,872
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Pomt2
protein-O-mannosyltransferase 2
IDA
RGD
PMID:16704966
RGD:11532759
NCBI chr 6:111,137,329...111,176,991
Ensembl chr 6:111,135,349...111,176,918
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Mustn1
musculoskeletal, embryonic nuclear protein 1
acts_upstream_of_or_within
ISO
(MGI:5703727|PMID:19410023)
RGD
PMID:19410023
MGI:5703727
NCBI chr16:6,962,737...6,964,987
Ensembl chr16:6,962,722...6,964,989
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Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:16550171)
RGD
PMID:16550171
NCBI chr 3:162,182,156...162,194,610
Ensembl chr 3:162,181,974...162,194,804
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Necab1
N-terminal EF-hand calcium binding protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:28,507,596...28,737,556
Ensembl chr 5:28,504,558...28,737,719
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Necab2
N-terminal EF-hand calcium binding protein 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr19:52,086,325...52,112,633
Ensembl chr19:52,086,325...52,112,629
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Necab3
N-terminal EF-hand calcium binding protein 3
involved_in
ISO
(PMID:10833507)
RGD
PMID:10833507
NCBI chr 3:150,047,826...150,062,806
Ensembl chr 3:150,047,826...150,073,721
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857134 (MGI:3526739|PMID:15292044)
Ensembl RGD
PMID:15292044
GO_REF:0000107 MGI:3526739
NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
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Gata1
GATA binding protein 1
involved_in
ISO
(PMID:15701726) (MGI:3580921|PMID:15701726)
RGD
PMID:15701726
MGI:3580921
NCBI chr X:15,273,937...15,281,759
Ensembl chr X:15,378,789...15,382,066 Ensembl chr X:15,378,789...15,382,066
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Abca2
ATP binding cassette subfamily A member 2
involved_in
ISO
(MGI:6355606|PMID:22086926)
RGD
PMID:22086926
MGI:6355606
NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
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Mt3
metallothionein 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:4881636|PMID:20544854)
UniProt RGD
PMID:20544854
GO_REF:0000024 MGI:4881636
NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
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