ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of glycoprotein metabolic process
Accession: GO:1903018
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Definition: Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.
Comment: human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein
Synonyms: exact_synonym: regulation of glycoprotein metabolism
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Apcs
amyloid P component, serum
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
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Ptx3
pentraxin 3
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
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Aatf
apoptosis antagonizing transcription factor
acts_upstream_of_or_within
ISO
(PMID:14627703)
RGD
PMID:14627703
NCBI chr10:69,299,029...69,392,207
Ensembl chr10:69,299,037...69,392,201
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Abca7
ATP binding cassette subfamily A member 7
involved_in
ISS ISO
GO_REF:0000024 (PMID:18429932)
Alzheimers_University_of_Toronto RGD
PMID:18429932
GO_REF:0000024
NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
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Ago2
argonaute RISC catalytic component 2
involved_in
IMP
PMID:20395292
ARUK-UCL
PMID:20395292
RGD:14390059
NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
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Bace2
beta-secretase 2
involved_in
ISO ISS
(PMID:12801932) GO_REF:0000024
RGD UniProt
PMID:12801932
GO_REF:0000024
NCBI chr11:36,707,447...36,789,550
Ensembl chr11:36,707,458...36,789,546
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Itm2a
integral membrane protein 2A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:72,486,383...72,492,344
Ensembl chr X:72,486,381...72,492,363
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Itm2b
integral membrane protein 2B
involved_in
ISO IBA IEA ISS
(PMID:16027166), (PMID:18524908) GO_REF:0000033 GO_REF:0000107 GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:16027166 PMID:18524908
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107
NCBI chr15:48,545,998...48,568,904
Ensembl chr15:48,546,001...48,568,917
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Itm2c
integral membrane protein 2C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:86,545,927...86,559,745
Ensembl chr 9:86,545,921...86,559,742
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Mir106a
microRNA 106a
involved_in
ISO
(PMID:18684319)
RGD
PMID:18684319
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
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Mir144
microRNA 144
involved_in
ISO
(PMID:27329039)
RGD
PMID:27329039
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
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Mir153
microRNA 153
involved_in
ISO
(PMID:21982160)
RGD
PMID:21982160
NCBI chr 6:138,163,595...138,163,681
Ensembl chr 6:138,163,595...138,163,681
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Mir17
microRNA 17
involved_in
ISO
(PMID:21982160)
RGD
PMID:21982160
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
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Mir20a
microRNA 20a
involved_in
ISO
(PMID:21982160)
RGD
PMID:21982160
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
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Mir298
microRNA 298
involved_in
ISO
(PMID:31942037)
RGD
PMID:31942037
NCBI chr 3:163,052,291...163,052,372
Ensembl chr 3:163,052,291...163,052,372
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Mir31
microRNA 31
involved_in
ISO
UniProtKB:P05067 (PMID:32069773)
RGD
PMID:32069773
NCBI chr 5:103,599,038...103,599,143
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Mir323
microRNA 323
involved_in
ISO
(PMID:21982160)
RGD
PMID:21982160
NCBI chr 6:128,725,539...128,725,624
Ensembl chr 6:128,725,539...128,725,624
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Mir455
microRNA 455
involved_in
ISO
(PMID:31181293)
RGD
PMID:31181293
NCBI chr 5:76,689,313...76,689,390
Ensembl chr 5:76,689,313...76,689,390
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Acot8
acyl-CoA thioesterase 8
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:9153233)
UniProt Ensembl RGD
PMID:9153233
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:153,531,192...153,542,851
Ensembl chr 3:153,531,193...153,542,851
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Hbegf
heparin-binding EGF-like growth factor
involved_in
IDA
PMID:12882762
UniProt
PMID:12882762
RGD:8554842
NCBI chr18:28,106,284...28,116,167
Ensembl chr18:28,105,760...28,116,441
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Cst3
cystatin C
involved_in
ISO
(PMID:10545518)
RGD
PMID:10545518
NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
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Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:9498750)
BHF-UCL RGD
PMID:9498750
GO_REF:0000024
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Mir144
microRNA 144
acts_upstream_of
ISO
(PMID:27785072)
RGD
PMID:27785072
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
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Apcs
amyloid P component, serum
involved_in
ISO
(PMID:23544079)
RGD
PMID:23544079
NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
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Ptx3
pentraxin 3
involved_in
ISO
(PMID:23544079)
RGD
PMID:23544079
NCBI chr 2:150,487,513...150,493,323
Ensembl chr 2:150,487,513...150,493,323
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Mgat4d
MGAT4 family, member D
involved_in
ISO
(PMID:20805325)
RGD
PMID:20805325
NCBI chr19:24,740,068...24,777,012
Ensembl chr19:24,740,078...24,777,012
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Oga
O-GlcNAcase
IMP
RGD
PMID:16332679
RGD:2305959
NCBI chr 1:244,598,285...244,633,835
Ensembl chr 1:244,598,292...244,634,359
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Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:16550171)
RGD
PMID:16550171
NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
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Abca2
ATP binding cassette subfamily A member 2
involved_in
ISO IEA
(PMID:20704561) GO_REF:0000107
RGD Ensembl
PMID:20704561
GO_REF:0000107
NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
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Ncstn
nicastrin
acts_upstream_of_or_within
ISO
(PMID:23826707)
RGD
PMID:23826707
NCBI chr13:84,530,442...84,546,454
Ensembl chr13:84,530,440...84,546,454
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Pawr
pro-apoptotic WT1 regulator
acts_upstream_of_or_within
ISO
(PMID:14627703)
RGD
PMID:14627703
NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
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Soat1
sterol O-acyltransferase 1
involved_in
ISO IEA
(PMID:17412327) GO_REF:0000107
RGD Ensembl
PMID:17412327
GO_REF:0000107
NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494
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Plcb1
phospholipase C beta 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:15849202)
BHF-UCL Ensembl RGD
PMID:15849202
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
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Il33
interleukin 33
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:26936882)
Ensembl RGD
PMID:26936882
GO_REF:0000107
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
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Il33
interleukin 33
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:26936882)
Ensembl RGD
PMID:26936882
GO_REF:0000107
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
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Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(PMID:15845453)
RGD
PMID:15845453
NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
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Ccl21
C-C motif chemokine ligand 21
involved_in
ISO
(PMID:15845453)
RGD
PMID:15845453
NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
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Ep300
E1A binding protein p300
IMP
fibronectin
RGD
PMID:17065349
RGD:2312275
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Igf1
insulin-like growth factor 1
involved_in
ISO IEA
(PMID:9564845) GO_REF:0000107
RGD Ensembl
PMID:9564845
GO_REF:0000107
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
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Insr
insulin receptor
IMP
P-glycoprotein
RGD
PMID:19049803
RGD:2307019
NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
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Ccr7
C-C motif chemokine receptor 7
involved_in
ISO
(PMID:15845453)
RGD
PMID:15845453
NCBI chr10:84,098,193...84,108,309
Ensembl chr10:84,097,381...84,108,309
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Rab1a
RAB1A, member RAS oncogene family
involved_in
ISO
UniProtKB:Q9H0U4 (PMID:21680502)
RGD
PMID:21680502
NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
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Rab1b
RAB1B, member RAS oncogene family
involved_in
ISO
UniProtKB:P62820 (PMID:21680502)
RGD
PMID:21680502
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868 Ensembl chr X:202,405,759...202,413,868
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Ctnnb1
catenin beta 1
involved_in
ISO IEA ISS
(PMID:15853773) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:15853773
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Pxylp1
2-phosphoxylose phosphatase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:24425863)
UniProt RGD
PMID:24425863
GO_REF:0000024
NCBI chr 8:97,419,766...97,485,163
Ensembl chr 8:97,419,776...97,485,064
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Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:15853773)
RGD
PMID:15853773
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
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Chp1
calcineurin-like EF-hand protein 1
involved_in
IDA
PMID:21543739
UniProt
PMID:21543739
RGD:8554239
NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
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Golga2
golgin A2
involved_in
ISO
(PMID:22735382)
RGD
PMID:22735382
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
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Ramp1
receptor activity modifying protein 1
involved_in
ISO IEA
(PMID:9620797) GO_REF:0000107
RGD Ensembl
PMID:9620797
GO_REF:0000107
NCBI chr 9:91,765,481...91,816,152
Ensembl chr 9:91,781,285...91,816,151
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Slc51b
SLC51 subunit beta
involved_in
ISO
(PMID:22535958)
RGD
PMID:22535958
NCBI chr 8:65,931,891...65,939,953
Ensembl chr 8:65,931,890...65,940,145
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Il15
interleukin 15
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:24509081)
Ensembl RGD
PMID:24509081
GO_REF:0000107
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
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Pomt1
protein-O-mannosyltransferase 1
IDA
RGD
PMID:16704966
RGD:11532759
NCBI chr 3:15,520,717...15,538,579
Ensembl chr 3:15,520,481...15,538,581
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Pomt2
protein-O-mannosyltransferase 2
IDA
RGD
PMID:16704966
RGD:11532759
NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
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Mustn1
musculoskeletal, embryonic nuclear protein 1
acts_upstream_of_or_within
ISO
(PMID:19410023)
RGD
PMID:19410023
NCBI chr16:6,072,908...6,075,161
Ensembl chr16:6,072,833...6,075,161
G
Slc2a10
solute carrier family 2 member 10
acts_upstream_of_or_within
ISO
(PMID:16550171)
RGD
PMID:16550171
NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
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Necab1
N-terminal EF-hand calcium binding protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642 Ensembl chr 5:28,357,859...28,578,642
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Necab2
N-terminal EF-hand calcium binding protein 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr19:47,501,351...47,527,722
Ensembl chr19:47,501,302...47,527,684
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857134 (PMID:15292044)
Ensembl RGD
PMID:15292044
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Gata1
GATA binding protein 1
involved_in
ISO
(PMID:15701726)
RGD
PMID:15701726
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
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Tm9sf2
transmembrane 9 superfamily member 2
involved_in
ISO
(PMID:28404855)
RGD
PMID:28404855
NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049
G
Abca2
ATP binding cassette subfamily A member 2
involved_in
ISO
(PMID:22086926)
RGD
PMID:22086926
NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
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Acer2
alkaline ceramidase 2
involved_in
ISO
(PMID:20089856)
RGD
PMID:20089856
NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
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