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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of glycoprotein metabolic process
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Accession:GO:1903018 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.
Comment:human serum amyloid P component (SAP) P02743 inhibits viral neuraminidase, NA (exo-alpha-sialidase activity) and thus the metabolism of glycoproteins, demonstrated in Figure 4A PMID:23544079, (IDA), the negative regulation term would be applied to this protein
Synonyms:exact_synonym: regulation of glycoprotein metabolism


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negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:1624291
RGD:1600115
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
negative regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aatf apoptosis antagonizing transcription factor JBrowse link 10 71,744,648 71,837,851 RGD:1624291
G Abca7 ATP binding cassette subfamily A member 7 JBrowse link 7 12,742,433 12,762,423 RGD:1624291
RGD:1600115
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:14390059
G Bace2 beta-secretase 2 JBrowse link 11 37,798,397 37,880,624 RGD:1624291
RGD:1600115
G Itm2a integral membrane protein 2A JBrowse link X 78,490,872 78,496,814 RGD:13792537
G Itm2b integral membrane protein 2B JBrowse link 15 55,254,703 55,277,713 RGD:1600115
RGD:13792537
RGD:1624291
G Itm2c integral membrane protein 2C JBrowse link 9 92,916,469 92,930,306 RGD:13792537
negative regulation of CD4 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acot8 acyl-CoA thioesterase 8 JBrowse link 3 161,260,837 161,272,495 RGD:1600115
RGD:1624291
negative regulation of elastin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hbegf heparin-binding EGF-like growth factor JBrowse link 18 29,330,302 29,340,185 RGD:8554842
negative regulation of elastin catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cst3 cystatin C JBrowse link 3 143,219,671 143,223,544 RGD:1624291
negative regulation of FasL biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:1624291
RGD:1600115
negative regulation of glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link 13 91,426,621 91,427,417 RGD:1624291
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:1624291
negative regulation of protein glycosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mgat4d MGAT4 family, member D JBrowse link 19 24,494,366 24,534,039 RGD:1624291
G Oga O-GlcNAcase JBrowse link 1 265,506,752 265,542,452 RGD:2305959
negative regulation of protein glycosylation in Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acer2 alkaline ceramidase 2 JBrowse link 5 105,230,540 105,279,732 RGD:1624291
G Tmem59 transmembrane protein 59 JBrowse link 5 126,783,061 126,804,177 RGD:1624291
negative regulation of proteoglycan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc2a10 solute carrier family 2 member 10 JBrowse link 3 162,182,156 162,194,610 RGD:1624291
positive regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
RGD:1600115
G Ncstn nicastrin JBrowse link 13 90,451,046 90,467,256 RGD:1624291
G Pawr pro-apoptotic WT1 regulator JBrowse link 7 51,273,764 51,353,700 RGD:1624291
RGD:1600115
G Soat1 sterol O-acyltransferase 1 JBrowse link 13 74,035,258 74,077,759 RGD:1624291
RGD:1600115
positive regulation of CD24 biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plcb1 phospholipase C beta 1 JBrowse link 3 127,721,244 128,419,565 RGD:1624291
RGD:1600115
positive regulation of glycoprotein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl19 C-C motif chemokine ligand 19 JBrowse link 5 58,181,025 58,182,969 RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:2312275
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1624291
RGD:1600115
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:2307019
positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr7 C-C motif chemokine receptor 7 JBrowse link 10 87,057,335 87,067,444 RGD:1624291
positive regulation of glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100363782 RAB1B, member RAS oncogene family-like RGD:1600115
G LOC102555167 ras-related protein Rab-1B-like JBrowse link 1 220,480,828 220,491,456 RGD:1600115
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1624291
G Rab1b RAB1B, member RAS oncogene family JBrowse link 1 220,483,529 220,491,469 RGD:1600115
RGD:1624291
positive regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1624291
RGD:1600115
G Pxylp1 2-phosphoxylose phosphatase 1 JBrowse link 8 104,724,728 104,790,639 RGD:1624291
RGD:1600115
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
positive regulation of protein glycosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chp1 calcineurin-like EF-hand protein 1 JBrowse link 3 111,354,506 111,389,998 RGD:8554239
G Golga2 golgin A2 JBrowse link 3 11,317,328 11,337,569 RGD:1624291
G Ramp1 receptor activity modifying protein 1 JBrowse link 9 98,313,632 98,364,206 RGD:1624291
G Slc51b solute carrier family 51 subunit beta JBrowse link 8 70,930,196 70,938,559 RGD:1624291
positive regulation of protein glycosylation in Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arfgef1 ADP ribosylation factor guanine nucleotide exchange factor 1 JBrowse link 5 8,666,046 8,760,458 RGD:1624291
RGD:1600115
positive regulation of protein O-linked glycosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:1624291
G Pomt1 protein-O-mannosyltransferase 1 JBrowse link 3 11,253,424 11,271,873 RGD:11532759
G Pomt2 protein-O-mannosyltransferase 2 JBrowse link 6 111,137,329 111,176,991 RGD:11532759
positive regulation of proteoglycan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mustn1 musculoskeletal, embryonic nuclear protein 1 JBrowse link 16 6,962,737 6,964,987 RGD:1624291
G Slc2a10 solute carrier family 2 member 10 JBrowse link 3 162,182,156 162,194,610 RGD:1624291
regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Necab1 N-terminal EF-hand calcium binding protein 1 JBrowse link 5 28,507,596 28,737,556 RGD:13792537
G Necab2 N-terminal EF-hand calcium binding protein 2 JBrowse link 19 52,086,325 52,112,633 RGD:13792537
G Necab3 N-terminal EF-hand calcium binding protein 3 JBrowse link 3 150,047,826 150,062,806 RGD:1624291
regulation of glycoprotein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1624291
RGD:1600115
G Gata1 GATA binding protein 1 JBrowse link X 15,273,937 15,281,759 RGD:1624291
regulation of protein glycosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca2 ATP binding cassette subfamily A member 2 JBrowse link 3 2,648,787 2,668,770 RGD:1624291
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:1624291
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      cellular metabolic process 10737
        regulation of cellular metabolic process 6083
          regulation of glycoprotein metabolic process 50
            modulation by host of viral glycoprotein metabolic process + 2
            negative regulation of glycoprotein metabolic process + 18
            positive regulation of glycoprotein metabolic process + 27
            regulation of elastin catabolic process + 1
            regulation of glycoprotein biosynthetic process + 43
Path 2
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      nitrogen compound metabolic process 10025
        organonitrogen compound metabolic process 6969
          protein metabolic process 6070
            glycoprotein metabolic process 357
              regulation of glycoprotein metabolic process 50
                modulation by host of viral glycoprotein metabolic process + 2
                negative regulation of glycoprotein metabolic process + 18
                positive regulation of glycoprotein metabolic process + 27
                regulation of elastin catabolic process + 1
                regulation of glycoprotein biosynthetic process + 43
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.