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ONTOLOGY REPORT - ANNOTATIONS


Term:organelle disassembly
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Accession:GO:1903008 term browser browse the term
Definition:The disaggregation of an organelle into its constituent components.
Synonyms:exact_synonym: organelle degradation


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organelle disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in ISO
ISS
(PMID:29973724)
GO_REF:0000024
RGD
UniProt
PMID:29973724 GO_REF:0000024 NCBI chr13:47,906,230...47,916,877
Ensembl chr13:47,906,231...47,916,877
JBrowse link
G Kif9 kinesin family member 9 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr 8:118,737,739...118,795,190
Ensembl chr 8:118,744,229...118,794,992
JBrowse link
autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048308.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:71,999,926...72,000,318 JBrowse link
G AABR07072668.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:59,991,111...59,991,590 JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO UniProtKB:O60260|UniProtKB:Q99MQ3 (PMID:25215947) RGD PMID:25215947 NCBI chr 3:80,634,470...80,830,068
Ensembl chr 3:80,634,470...80,830,068
JBrowse link
G Atg12 autophagy related 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:40,721,799...40,732,143
Ensembl chr18:40,721,800...40,732,126
JBrowse link
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,612,584...221,632,291
Ensembl chr 1:221,612,584...221,632,267
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:129,449,451...129,519,599
Ensembl chr 6:129,449,449...129,509,720
JBrowse link
G Atg3 autophagy related 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:60,585,192...60,613,706
Ensembl chr11:60,585,171...60,613,718
JBrowse link
G Atg5 autophagy related 5 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:3796473|PMID:18281291)
PMID:21873635
Ensembl
RGD
PMID:18281291, PMID:21873635 GO_REF:0000107 MGI:3796473, RGD:13792537 NCBI chr20:49,301,783...49,393,147
Ensembl chr20:49,318,308...49,393,140
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
(MGI:4420830|PMID:20080761)
(MGI:5529208|PMID:23981124)
PMID:21873635
RGD PMID:19279012 PMID:20080761 PMID:23981124, PMID:21873635 MGI:4420830 MGI:5529208, RGD:13792537 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Atg9a autophagy related 9A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:82,382,800...82,393,429
Ensembl chr 9:82,382,800...82,393,382
JBrowse link
G Atg9b autophagy related 9B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:7,314,369...7,322,095
Ensembl chr 4:7,314,369...7,321,029
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:25215947)
(MGI:3796473|PMID:18281291)
RGD PMID:18281291 PMID:25215947 MGI:3796473 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Capn10 calpain 10 IMP RGD PMID:22568896 RGD:7247732 NCBI chr 9:100,104,000...100,112,833
Ensembl chr 9:100,104,000...100,112,832
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:25217637) RGD PMID:25217637 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 involved_in IBA
ISO
PMID:21873635
(MGI:3845412|PMID:19451219)
RGD PMID:19451219, PMID:21873635 MGI:3845412, RGD:13792537 NCBI chr 2:240,586,754...240,611,560
Ensembl chr 2:240,586,754...240,611,560
JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 2:196,655,469...196,666,447
Ensembl chr 2:196,655,469...196,666,446
JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO
ISS
(PMID:23933751)
GO_REF:0000024
RGD
UniProt
PMID:23933751 GO_REF:0000024 NCBI chr 7:23,815,246...23,843,505
Ensembl chr 7:23,815,245...23,843,634
JBrowse link
G Fis1 fission, mitochondrial 1 involved_in ISO
IBA
(PMID:18515060)
PMID:21873635
RGD PMID:18515060, PMID:21873635 RGD:13792537 NCBI chr12:22,750,485...22,765,324
Ensembl chr12:22,750,485...22,765,308
JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in
acts_upstream_of_or_within
ISO
IBA
ISS
(PMID:22267086)
UniProtKB:Q9H492 (PMID:22267086)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22267086, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:5,549,468...5,566,125
Ensembl chr  X:5,549,419...5,566,127
JBrowse link
G Fundc2 FUN14 domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:401,878...407,954
Ensembl chr18:402,295...407,954
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,601,288...56,604,223
Ensembl chr10:56,601,288...56,604,221
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:163,293,724...163,302,866
Ensembl chr 4:163,293,724...163,302,858
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:44,164,935...44,175,771
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:95,943,674...95,944,604
Ensembl chr19:44,164,935...44,175,770
JBrowse link
G LOC365778 similar to RIKEN cDNA 1700034I23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:127,776,103...127,778,350
Ensembl chr 2:127,770,767...127,778,350
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q8IVP5 (PMID:22267086)
RGD PMID:22267086, PMID:21873635 RGD:13792537 NCBI chr 3:150,801,289...150,802,935
Ensembl chr 3:150,801,289...150,802,935
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
PMID:21873635
RGD PMID:19279012, PMID:21873635 RGD:13792537 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,864,144...75,874,567
Ensembl chr16:75,873,881...75,874,519
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO
IBA
(PMID:20798600), (PMID:23933751), (PMID:24896179)
PMID:21873635
RGD PMID:20798600 PMID:23933751 PMID:24896179, PMID:21873635 RGD:13792537 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19783904 RGD:10059673 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
ISS
ISO
IDA
PMID:21873635
GO_REF:0000024
(PMID:19029340), (PMID:23933751), (PMID:24896179), (PMID:25621951)
PMID:20457763
ParkinsonsUK-UCL
RGD
UniProt
PMID:19029340 PMID:23933751 PMID:24896179 PMID:25621951, PMID:21873635, PMID:20457763 GO_REF:0000024, RGD:13792537, RGD:10047224 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,033,918...13,097,369
Ensembl chr 5:13,033,918...13,097,341
JBrowse link
G Slc25a46 solute carrier family 25, member 46 acts_upstream_of_or_within ISO MGI:6358090 (MGI:5921109|PMID:28934388) RGD PMID:28934388 MGI:5921109 NCBI chr18:24,369,104...24,397,412
Ensembl chr18:24,369,125...24,397,551
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377
JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISO (PMID:24896179), (PMID:25621951) RGD PMID:24896179 PMID:25621951 NCBI chr12:48,262,663...48,316,580
Ensembl chr12:48,262,658...48,316,722
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:15,621,249...15,627,159
Ensembl chr  X:15,621,209...15,627,235
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:110,523,843...110,555,769
Ensembl chr10:110,525,749...110,555,761
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:97,859,730...97,896,949
Ensembl chr10:97,859,727...97,896,525
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:13,969,704...13,998,134
Ensembl chr12:13,969,586...13,998,172
JBrowse link
axonemal microtubule depolymerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif19 kinesin family member 19 involved_in ISO (MGI:5460922|PMID:23168168) RGD PMID:23168168 MGI:5460922 NCBI chr10:103,308,392...103,334,466
Ensembl chr10:103,308,392...103,334,466
JBrowse link
Golgi disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk1 cyclin-dependent kinase 1 involved_in IDA PMID:9753325 UniProt PMID:9753325 RGD:632911 NCBI chr20:20,576,341...20,591,510
Ensembl chr20:20,576,377...20,591,549
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 involved_in ISO (PMID:23418352) RGD PMID:23418352 NCBI chr 1:265,904,616...266,033,107
Ensembl chr 1:265,904,566...266,033,156
JBrowse link
G Golga2 golgin A2 involved_in IDA PMID:9753325 UniProt PMID:9753325 RGD:632911 NCBI chr 3:11,317,328...11,337,569
Ensembl chr 3:11,317,183...11,336,458
JBrowse link
G Plk3 polo-like kinase 3 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:14980500), (PMID:19103756)
UniProt
RGD
PMID:14980500 PMID:19103756, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Plk5 polo-like kinase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:12,212,910...12,234,253
Ensembl chr 7:12,212,911...12,221,330
JBrowse link
G Stx5 syntaxin 5 involved_in ISO (PMID:16081076) RGD PMID:16081076 NCBI chr 1:224,939,497...224,955,658
Ensembl chr 1:224,939,497...224,955,657
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 involved_in ISO (PMID:19103756) RGD PMID:19103756 NCBI chr 6:129,835,788...129,902,839
Ensembl chr 6:129,835,919...129,902,793
JBrowse link
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:21753002), (PMID:25215947) RGD PMID:21753002 PMID:25215947 NCBI chr 3:80,634,470...80,830,068
Ensembl chr 3:80,634,470...80,830,068
JBrowse link
G Atg13 autophagy related 13 involved_in IBA
ISO
PMID:21873635
(MGI:5607224|PMID:21855797)
RGD PMID:21855797, PMID:21873635 MGI:5607224, RGD:13792537 NCBI chr 3:80,580,549...80,614,554
Ensembl chr 3:80,581,247...80,601,410
JBrowse link
G Atg14 autophagy related 14 involved_in ISO
IBA
(PMID:23878393)
PMID:21873635
RGD PMID:23878393, PMID:21873635 RGD:13792537 NCBI chr15:24,343,418...24,374,776
Ensembl chr15:24,343,314...24,374,753
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:23878393) RGD PMID:23878393 NCBI chr10:89,209,944...89,225,297
Ensembl chr10:89,209,940...89,225,297
JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISS
ISO
GO_REF:0000024
(PMID:28017329)
UniProt
RGD
PMID:28017329 GO_REF:0000024 NCBI chr19:53,635,449...53,643,970
Ensembl chr19:53,629,779...53,646,058
JBrowse link
G Phb2 prohibitin 2 involved_in ISO
ISS
(PMID:28017329)
(MGI:6436385|PMID:28017329)
GO_REF:0000024
RGD
UniProt
PMID:28017329 GO_REF:0000024 MGI:6436385 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within
ISO (PMID:28017329)
MGI:1921624 (MGI:5603233|PMID:24949970)
RGD PMID:24949970 PMID:28017329 MGI:5603233 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (MGI:6370289|PMID:31446166) RGD PMID:31446166 MGI:6370289 NCBI chr 2:78,391,921...78,401,569
Ensembl chr 2:78,391,921...78,399,987
Ensembl chr 2:78,391,921...78,399,987
JBrowse link
G Sqstm1 sequestosome 1 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q9JK66 (PMID:20457763)
RGD PMID:20457763, PMID:21873635 RGD:13792537 NCBI chr10:35,704,728...35,716,316
Ensembl chr10:35,704,730...35,716,294
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO
IEA
(PMID:33096711)
GO_REF:0000107
(MGI:6450300|PMID:25919711)
RGD
Ensembl
PMID:25919711 PMID:33096711 GO_REF:0000107 MGI:6450300 NCBI chr  X:156,421,006...156,429,461
Ensembl chr  X:156,421,009...156,428,593
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) RGD PMID:21855797 MGI:5607224 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
mitophagy by induced vacuole formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata18 spermatogenesis associated 18 involved_in IBA
ISS
IEA
ISO
PMID:21873635
GO_REF:0000024
GO_REF:0000107
(PMID:21264228)
UniProt
Ensembl
RGD
PMID:21264228, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:37,081,529...37,108,245
Ensembl chr14:37,081,427...37,108,341
JBrowse link
mitotic spindle disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spast spastin involved_in ISO
ISS
(PMID:26040712)
GO_REF:0000024
RGD
UniProt
PMID:26040712 GO_REF:0000024 NCBI chr 6:22,230,067...22,282,166
Ensembl chr 6:22,230,928...22,281,886
JBrowse link
G Vcp valosin-containing protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454)
(MGI:5689082|PMID:25470454)
RGD PMID:25470454 MGI:5689082 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:5,002,196...5,196,914
Ensembl chr10:5,009,826...5,196,892
JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr 7:2,827,242...2,854,230
Ensembl chr 7:2,827,247...2,852,681
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:48,262,663...48,316,580
Ensembl chr12:48,262,658...48,316,722
JBrowse link
negative regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 involved_in ISO (MGI:5581539|PMID:24709290) RGD PMID:24709290 MGI:5581539 NCBI chr 4:113,883,671...113,886,833
Ensembl chr 4:113,883,670...113,886,994
JBrowse link
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO
ISS
(PMID:26942284)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:26942284 GO_REF:0000024 NCBI chr 8:73,682,814...73,843,290
Ensembl chr 8:73,682,887...73,842,928
JBrowse link
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in ISO UniProtKB:Q9JK66|UniProtKB:Q9Z2V5 (PMID:20457763) RGD PMID:20457763 NCBI chr  X:15,396,185...15,417,486
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Mfn2 mitofusin 2 involved_in ISO (MGI:5498413|PMID:23620051) RGD PMID:23620051 MGI:5498413 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Optn optineurin involved_in ISO
IEA
(PMID:25294927)
GO_REF:0000107
RGD
Ensembl
PMID:25294927 GO_REF:0000107 NCBI chr17:77,167,700...77,218,374
Ensembl chr17:77,167,740...77,218,389
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19029340) RGD PMID:19029340 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5298125|PMID:22020285) RGD PMID:22020285 MGI:5298125 NCBI chr12:11,433,815...11,526,465
Ensembl chr12:11,407,213...11,526,465
JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 IMP RGD PMID:23698117 RGD:11561968 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Fbxo7 F-box protein 7 involved_in IBA
IMP
ISO
PMID:21873635
PMID:26310625
(PMID:26310625)
RGD PMID:26310625, PMID:21873635, PMID:26310625 RGD:13792537, RGD:11536096 NCBI chr 7:23,815,246...23,843,505
Ensembl chr 7:23,815,245...23,843,634
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3796473|PMID:18281291)
Ensembl
RGD
PMID:18281291 GO_REF:0000107 MGI:3796473 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:81,105,139...81,254,637
Ensembl chr14:81,105,139...81,254,637
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD PMID:26310625 NCBI chr 1:48,880,015...50,069,998 JBrowse link
positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:150,719,570...150,723,287
Ensembl chr 5:150,719,569...150,723,321
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Hk2 hexokinase 2 involved_in ISO (PMID:23962723) RGD PMID:23962723 NCBI chr 4:113,559,396...113,609,897
Ensembl chr 4:113,559,427...113,610,243
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (MGI:5581539|PMID:24709290) RGD PMID:24709290 MGI:5581539 NCBI chr 5:156,855,105...156,864,517
Ensembl chr 5:156,850,206...156,864,517
JBrowse link
G Pink1 PTEN induced kinase 1 IMP RGD PMID:25154397 RGD:12904014 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:28608965 RGD:13432560 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6407583|PMID:31618756)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31618756 GO_REF:0000024 GO_REF:0000107 MGI:6407583 NCBI chr16:49,266,903...49,270,698
Ensembl chr16:49,266,903...49,270,698
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:6407583|PMID:31618756)
UniProt
RGD
PMID:31618756 GO_REF:0000024 MGI:6407583 NCBI chr  X:123,404,570...123,407,637
Ensembl chr  X:123,404,518...123,407,645
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (PMID:32047033) RGD PMID:32047033 NCBI chr10:37,724,915...37,752,827
Ensembl chr10:37,724,915...37,752,826
JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) RGD PMID:29307555 NCBI chr 5:162,891,451...163,119,239
Ensembl chr 5:162,891,451...163,119,239
JBrowse link
positive regulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in IEA
ISO
GO_REF:0000107
(MGI:5607224|PMID:21855797)
Ensembl
RGD
PMID:21855797 GO_REF:0000107 MGI:5607224 NCBI chr 8:22,160,922...22,173,797
Ensembl chr 8:22,154,067...22,173,804
JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO UniProtKB:Q9JK66 (MGI:5616310|PMID:20457763) RGD PMID:20457763 MGI:5616310 NCBI chr  X:15,396,185...15,417,486
Ensembl chr  X:15,295,473...15,316,671
Ensembl chr  X:15,295,473...15,316,671
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO
IEA
(PMID:30217973)
GO_REF:0000107
RGD
Ensembl
PMID:30217973 GO_REF:0000107 NCBI chr  X:21,474,627...21,603,348
Ensembl chr  X:21,499,934...21,598,876
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) RGD PMID:20871098 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:20457763), (PMID:20871098), (PMID:23212910) RGD PMID:20457763 PMID:20871098 PMID:23212910 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in ISO (PMID:24270810) RGD PMID:24270810 NCBI chr 4:7,835,949...7,842,790
Ensembl chr 4:7,835,949...7,842,789
JBrowse link
regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3l BCL2 interacting protein 3 like involved_in ISO UniProtKB:Q9Z2F7 (MGI:5616312|PMID:20200478) RGD PMID:20200478 MGI:5616312 NCBI chr15:43,643,897...43,667,123
Ensembl chr15:43,643,897...43,667,029
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Cttn cortactin involved_in ISO (MGI:5616310|PMID:20457763) RGD PMID:20457763 MGI:5616310 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Dnm1l dynamin 1-like involved_in ISO
IBA
UniProtKB:Q9BXM7 (PMID:19279012)
PMID:21873635
RGD PMID:19279012, PMID:21873635 RGD:13792537 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr 1:82,097,244...82,108,238
Ensembl chr 1:82,097,247...82,108,203
JBrowse link
G Parl presenilin associated, rhomboid-like involved_in IEA
ISO
GO_REF:0000107
(MGI:5619462|PMID:21355049)
Ensembl
RGD
PMID:21355049 GO_REF:0000107 MGI:5619462 NCBI chr11:84,517,368...84,544,463
Ensembl chr11:84,517,368...84,544,462
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr10:46,570,996...46,593,021
Ensembl chr10:46,570,996...46,593,009
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr10:107,292,828...107,324,355
Ensembl chr10:107,292,828...107,324,355
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (MGI:5689082|PMID:25470454) RGD PMID:25470454 MGI:5689082 NCBI chr10:37,724,915...37,752,827
Ensembl chr10:37,724,915...37,752,826
JBrowse link
reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,612,584...221,632,291
Ensembl chr 1:221,612,584...221,632,267
JBrowse link
G Atg2b autophagy related 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:129,449,451...129,519,599
Ensembl chr 6:129,449,449...129,509,720
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:32160526) RGD PMID:32160526 NCBI chr 3:123,195,580...123,206,828
Ensembl chr 3:123,195,580...123,206,828
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2176173|MGI:3526069 (MGI:6323456|PMID:31006538)
RGD PMID:31006538, PMID:21873635 MGI:6323456, RGD:13792537 NCBI chr 5:13,033,918...13,097,369
Ensembl chr 5:13,033,918...13,097,341
JBrowse link
G Retreg1 reticulophagy regulator 1 involved_in ISO
IEA
IBA
ISS
(PMID:26040720)
GO_REF:0000002
(MGI:5646045|PMID:26040720)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
InterPro
Ensembl
GO_Central
PMID:26040720, PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 MGI:5646045, RGD:13792537 NCBI chr 2:78,391,921...78,401,569
Ensembl chr 2:78,391,921...78,399,987
Ensembl chr 2:78,391,921...78,399,987
JBrowse link
G Retreg3 reticulophagy regulator family member 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:89,006,595...89,030,595
Ensembl chr10:89,006,595...89,030,595
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5925643|PMID:29056340)
GO_REF:0000024
RGD
UniProt
PMID:29056340, PMID:21873635 GO_REF:0000024 MGI:5925643, RGD:13792537 NCBI chr18:28,529,537...28,535,828
Ensembl chr18:28,529,576...28,535,828
JBrowse link
G Tex264 testis expressed 264 involved_in
acts_upstream_of_or_within
ISO (PMID:31006537), (PMID:31006538)
(PMID:31006538)
RGD PMID:31006537 PMID:31006538 NCBI chr 8:115,360,706...115,388,299
Ensembl chr 8:115,360,713...115,388,266
JBrowse link
G Uba5 ubiquitin-like modifier activating enzyme 5 involved_in ISO
ISS
(PMID:32160526)
GO_REF:0000024
RGD
UniProt
PMID:32160526 GO_REF:0000024 NCBI chr 8:112,578,607...112,594,192
Ensembl chr 8:112,578,590...112,594,261
JBrowse link
G Ufc1 ubiquitin-fold modifier conjugating enzyme 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:32160526)
UniProt
RGD
PMID:32160526 GO_REF:0000024 NCBI chr13:89,661,763...89,668,513
Ensembl chr13:89,661,763...89,668,473
JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISO
ISS
(PMID:32160526)
GO_REF:0000024
RGD
UniProt
PMID:32160526 GO_REF:0000024 NCBI chr 5:39,616,479...39,650,894
Ensembl chr 5:39,615,956...39,650,895
JBrowse link
G Ufm1 ubiquitin-fold modifier 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:32160526)
UniProt
RGD
PMID:32160526 GO_REF:0000024 NCBI chr 2:143,096,268...143,104,412
Ensembl chr 2:143,096,271...143,104,412
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,908,105...51,934,704
Ensembl chr12:51,908,448...51,934,702
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:48,050,079...48,129,377
Ensembl chr10:48,050,803...48,129,377
JBrowse link
G Zfp622 zinc finger protein 622 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:78,407,312...78,421,152
Ensembl chr 2:78,407,414...78,421,024
Ensembl chr 2:78,407,414...78,421,024
JBrowse link
ribosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Denr density regulated reinitiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr12:38,095,717...38,117,758
Ensembl chr12:38,096,034...38,116,919
JBrowse link
G Eif2d eukaryotic translation initiation factor 2D involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr13:47,935,138...47,958,459
Ensembl chr13:47,935,163...47,954,090
JBrowse link
G Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 involved_in IEA
IBA
ISS
ISO
GO_REF:0000104
PMID:21873635
GO_REF:0000024
(PMID:19716793)
UniProt
RGD
PMID:19716793, PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 2:27,949,195...27,984,045
Ensembl chr 2:27,949,208...27,984,256
JBrowse link
G Mcts1 MCTS1, re-initiation and release factor involved_in ISO (PMID:20713520) RGD PMID:20713520 NCBI chr  X:124,894,269...124,906,129
Ensembl chr  X:124,894,466...124,906,162
JBrowse link
G Mrrf mitochondrial ribosome recycling factor involved_in ISO (PMID:19716793) RGD PMID:19716793 NCBI chr 3:15,463,884...15,520,621
Ensembl chr 3:15,463,953...15,520,618
JBrowse link
G Mtif3 mitochondrial translational initiation factor 3 involved_in ISO
IBA
(PMID:12095986)
PMID:21873635
RGD PMID:12095986, PMID:21873635 RGD:13792537 NCBI chr12:9,846,355...9,857,548
Ensembl chr12:9,846,398...9,857,548
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:47,266,758...47,268,526
Ensembl chr 2:47,266,738...47,268,625
JBrowse link
stress granule disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 involved_in IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:23415227), (PMID:29973724)
Ensembl
UniProt
RGD
PMID:23415227 PMID:29973724, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:47,906,230...47,916,877
Ensembl chr13:47,906,231...47,916,877
JBrowse link
G Kif5b kinesin family member 5B involved_in ISO (MGI:4397616|PMID:19825938) RGD PMID:19825938 MGI:4397616 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Klc1 kinesin light chain 1 involved_in ISO (MGI:4397616|PMID:19825938) RGD PMID:19825938 MGI:4397616 NCBI chr 6:136,330,151...136,373,716
Ensembl chr 6:136,330,383...136,373,721
JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS
(PMID:29804830)
GO_REF:0000024
RGD
UniProt
PMID:29804830 GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Zfand1 zinc finger AN1-type containing 1 involved_in ISO
IBA
(PMID:29804830)
PMID:21873635
RGD PMID:29804830, PMID:21873635 RGD:13792537 NCBI chr 2:93,656,895...93,666,745
Ensembl chr 2:93,656,946...93,665,939
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular component organization or biogenesis 6724
        cellular component organization 6479
          cellular component disassembly 433
            organelle disassembly 114
              Golgi disassembly 7
              P granule disassembly 0
              chloroplast disassembly 0
              cilium disassembly + 1
              endoplasmic reticulum disassembly 0
              kinetochore disassembly 0
              lipid droplet disassembly 0
              mitochondrion disassembly + 83
              nucleus disassembly 0
              peroxisomal membrane disassembly 0
              peroxisome disassembly 0
              proteasome storage granule disassembly 0
              reticulophagy + 15
              ribosome disassembly 7
              septin ring disassembly 0
              spindle disassembly + 2
              stress granule disassembly 5
paths to the root