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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of supramolecular fiber organization
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Accession:GO:1902905 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.
Comment:HSPA8, human, P11142 in PMID:23921388 inferred from direct assay to negatively regulate fibrillation of alpha-Syn in vitro
Synonyms:narrow_synonym: activation of fibril organisation;   activation of fibril organization
 related_synonym: positive regulation of fibril organisation;   up regulation of fibril organisation;   up regulation of fibril organization;   upregulation of fibril organisation;   upregulation of fibril organization


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'de novo' actin filament nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Jmy junction mediating and regulatory protein, p53 cofactor JBrowse link 2 23,026,506 23,097,702 RGD:1624291
RGD:13792537
actin filament uncapping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn2 actinin alpha 2 JBrowse link 17 66,304,530 66,397,647 RGD:1624291
actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Evl Enah/Vasp-like JBrowse link 6 132,470,283 132,590,242 RGD:1600115
G Fmn1 formin 1 JBrowse link 3 104,783,093 105,170,761 RGD:1600115
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1600115
G Lmod1 leiomodin 1 JBrowse link 13 52,147,099 52,189,835 RGD:1624291
RGD:1600115
G Lmod2 leiomodin 2 JBrowse link 4 51,553,439 51,561,135 RGD:1600115
RGD:1624291
G Lmod3 leiomodin 3 JBrowse link 4 129,604,378 129,619,136 RGD:1624291
G Spire1 spire-type actin nucleation factor 1 JBrowse link 18 63,226,557 63,357,420 RGD:1600115
G Spire2 spire-type actin nucleation factor 2 JBrowse link 19 56,136,904 56,175,500 RGD:1600115
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1600115
Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr2 actin related protein 2 JBrowse link 14 104,338,486 104,375,840 RGD:1600115
RGD:13792537
RGD:1624291
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:1600115
RGD:13792537
RGD:1624291
G Actr3b actin related protein 3B JBrowse link 4 5,644,287 5,672,708 RGD:1600115
G Arpc1a actin related protein 2/3 complex, subunit 1A JBrowse link 12 11,272,609 11,294,084 RGD:1600115
RGD:13792537
G Arpc1b actin related protein 2/3 complex, subunit 1B JBrowse link 12 11,252,300 11,265,849 RGD:1624291
RGD:13792537
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:1624291
RGD:13792537
RGD:1600115
G Arpc3 actin related protein 2/3 complex, subunit 3 JBrowse link 12 39,653,951 39,667,817 RGD:1624291
RGD:13792537
G Arpc4 actin related protein 2/3 complex, subunit 4 JBrowse link 4 145,330,457 145,340,985 RGD:1624291
G Arpc5 actin related protein 2/3 complex, subunit 5 JBrowse link 13 70,174,970 70,183,879 RGD:1624291
RGD:13792537
RGD:1600115
G Arpc5l actin related protein 2/3 complex, subunit 5-like JBrowse link 3 23,301,455 23,309,077 RGD:13792537
G Arpc5l-ps1 actin related protein 2/3 complex, subunit 5-like, pseudogene 1 JBrowse link 9 49,794,998 49,795,995 RGD:13792537
G Iqgap2 IQ motif containing GTPase activating protein 2 JBrowse link 2 26,161,628 26,439,067 RGD:1624291
G Jmy junction mediating and regulatory protein, p53 cofactor JBrowse link 2 23,026,506 23,097,702 RGD:1624291
RGD:13792537
G Magel2 MAGE family member L2 JBrowse link 1 123,015,404 123,019,945 RGD:1624291
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:1624291
G Washc1 WASH complex subunit 1 JBrowse link 9 113,918,914 113,936,861 RGD:1600115
RGD:1624291
G Whamm WASP homolog associated with actin, golgi membranes and microtubules JBrowse link 1 143,401,986 143,430,356 RGD:13792537
barbed-end actin filament uncapping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link 17 43,050,282 43,339,403 RGD:1624291
negative regulation of actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arpin actin-related protein 2/3 complex inhibitor JBrowse link 1 141,664,790 141,672,789 RGD:1624291
RGD:13792537
G Coro1a coronin 1A JBrowse link 1 198,123,883 198,128,890 RGD:1624291
negative regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Coro1b coronin 1B JBrowse link 1 219,397,827 219,403,253 RGD:1624291
RGD:1600115
G Ctnna2 catenin alpha 2 JBrowse link 4 107,880,611 109,042,724 RGD:1624291
G Gmfb glia maturation factor, beta JBrowse link 15 23,597,846 23,611,541 RGD:1600115
RGD:13792537
G Gmfg glia maturation factor, gamma JBrowse link 1 85,312,473 85,322,860 RGD:1624291
RGD:13792537
RGD:1600115
G Hip1r huntingtin interacting protein 1 related JBrowse link 12 38,024,517 38,053,184 RGD:1624291
G Pick1 protein interacting with PRKCA 1 JBrowse link 7 120,465,472 120,484,824 RGD:8554748
negative regulation of barbed-end actin filament capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link 17 43,050,282 43,339,403 RGD:1624291
G Carmil2 capping protein regulator and myosin 1 linker 2 JBrowse link 19 37,652,383 37,665,333 RGD:1624291
G Cracd capping protein inhibiting regulator of actin dynamics JBrowse link 14 33,649,989 33,783,794 RGD:1624291
G Washc2c WASH complex subunit 2C JBrowse link 4 148,139,512 148,197,363 RGD:1624291
positive regulation of actin filament bundle assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:1600115
RGD:1624291
G Flna filamin A JBrowse link X 156,460,785 156,487,245 RGD:7207404
G Id1 inhibitor of DNA binding 1, HLH protein JBrowse link 3 148,214,623 148,216,715 RGD:9686088
G Limk1 LIM domain kinase 1 JBrowse link 12 25,036,630 25,070,538 RGD:1624291
G LOC100909840 profilin-2-like JBrowse link 2 148,044,714 148,050,464 RGD:13792537
G Mk1 Mk1 protein JBrowse link 16 20,531,720 20,534,209 RGD:13792537
G Mtss1 MTSS I-BAR domain containing 1 JBrowse link 7 98,820,799 98,960,878 RGD:1624291
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:13792537
G Pfn2 profilin 2 JBrowse link 2 147,953,858 147,959,692 RGD:1624291
RGD:13792537
G Pfn3 profilin 3 JBrowse link 17 9,746,485 9,747,012 RGD:13792537
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
G Swap70 switching B-cell complex subunit SWAP70 JBrowse link 1 174,862,683 174,924,101 RGD:1624291
G Synpo synaptopodin JBrowse link 18 55,863,081 55,921,412 RGD:1600115
RGD:13792537
RGD:1624291
G Synpo2 synaptopodin 2 JBrowse link 2 227,255,243 227,411,924 RGD:1624291
RGD:13792537
G Synpo2l synaptopodin 2-like JBrowse link 15 4,064,706 4,074,151 RGD:13792537
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1624291
positive regulation of actin filament depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AC093995.1 RGD:1600115
G Cfl1 cofilin 1 JBrowse link 1 220,869,805 220,873,337 RGD:1624291
G Cfl2 cofilin 2 JBrowse link 6 75,759,140 75,763,185 RGD:1624291
G Dstn destrin, actin depolymerizing factor JBrowse link 3 138,024,508 138,051,304 RGD:1624291
G F2rl1 F2R like trypsin receptor 1 JBrowse link 2 25,222,324 25,235,275 RGD:1624291
G Pdxp pyridoxal phosphatase JBrowse link 7 120,140,460 120,145,908 RGD:1600115
RGD:1624291
G Plek pleckstrin JBrowse link 14 100,151,518 100,184,192 RGD:1624291
G Sema5a semaphorin 5A JBrowse link 2 85,377,318 85,808,970 RGD:1624291
RGD:1600115
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1624291
G Wdr1 WD repeat domain 1 JBrowse link 14 76,990,014 77,023,739 RGD:1624291
RGD:13792537
positive regulation of actin filament polymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:2306202
G Alox15 arachidonate 15-lipoxygenase JBrowse link 10 56,953,692 56,962,145 RGD:1624291
RGD:1600115
G Arf6 ADP-ribosylation factor 6 JBrowse link 6 91,697,109 91,698,257 RGD:1624291
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:1624291
G Bag4 BAG cochaperone 4 JBrowse link 16 71,057,709 71,075,874 RGD:1624291
RGD:1600115
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:13792537
G Baiap2l1 BAI1-associated protein 2-like 1 JBrowse link 12 12,226,967 12,321,172 RGD:1624291
RGD:13792537
RGD:1600115
G Baiap2l2 BAI1-associated protein 2-like 2 JBrowse link 7 120,492,366 120,518,803 RGD:13792537
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:1600115
RGD:1624291
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link 17 43,050,282 43,339,403 RGD:1624291
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:1624291
G Ccl21 C-C motif chemokine ligand 21 JBrowse link 5 58,197,678 58,198,782 RGD:1624291
G Ccl24 C-C motif chemokine ligand 24 JBrowse link 12 24,131,529 24,152,626 RGD:1624291
G Ccl26 C-C motif chemokine ligand 26 JBrowse link 12 24,157,182 24,161,870 RGD:1624291
G Cdc42ep1 CDC42 effector protein 1 JBrowse link 7 120,063,256 120,071,154 RGD:13792537
G Cdc42ep2 CDC42 effector protein 2 JBrowse link 1 221,272,349 221,281,252 RGD:1624291
RGD:13792537
G Cdc42ep3 CDC42 effector protein 3 JBrowse link 6 1,922,500 1,942,972 RGD:13792537
G Cdc42ep4 CDC42 effector protein 4 JBrowse link 10 102,244,680 102,269,272 RGD:13792537
G Cdc42ep5 CDC42 effector protein 5 JBrowse link 1 73,717,207 73,719,600 RGD:1624291
RGD:13792537
G Cracd capping protein inhibiting regulator of actin dynamics JBrowse link 14 33,649,989 33,783,794 RGD:1624291
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:1624291
G Cttn cortactin JBrowse link 1
1
217,602,698
215,255,385
217,638,196
215,290,882
RGD:10047281
RGD:1624291
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:1624291
RGD:1600115
G Evl Enah/Vasp-like JBrowse link 6 132,470,283 132,590,242 RGD:1624291
RGD:13792537
G Fchsd1 FCH and double SH3 domains 1 JBrowse link 18 31,096,815 31,109,077 RGD:1624291
G Fchsd2 FCH and double SH3 domains 2 JBrowse link 1 166,140,025 166,395,915 RGD:1624291
G Fer FER tyrosine kinase JBrowse link 9 111,557,804 111,868,583 RGD:1600115
RGD:1624291
G Fmn1 formin 1 JBrowse link 3 104,783,093 105,170,761 RGD:1624291
G Grb2 growth factor receptor bound protein 2 JBrowse link 10 104,193,953 104,263,071 RGD:1624291
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:7240703
G Kirrel1 kirre like nephrin family adhesion molecule 1 JBrowse link 2 186,420,743 186,515,209 RGD:1624291
G Lmod1 leiomodin 1 JBrowse link 13 52,147,099 52,189,835 RGD:1624291
RGD:1600115
G Lmod2 leiomodin 2 JBrowse link 4 51,553,439 51,561,135 RGD:1624291
RGD:1600115
G LOC100909840 profilin-2-like JBrowse link 2 148,044,714 148,050,464 RGD:1600115
G LOC691418 hypothetical protein LOC691418 JBrowse link 3 110,980,265 110,983,932 RGD:13792537
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 2 43,329,516 43,393,203 RGD:1624291
G Mlst8 MTOR associated protein, LST8 homolog JBrowse link 10 13,839,250 13,845,001 RGD:1624291
RGD:1600115
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1624291
G Myo1c myosin 1C JBrowse link 10 63,803,311 63,819,614 RGD:11073622
G Nck1 NCK adaptor protein 1 JBrowse link 8 108,787,797 108,847,779 RGD:1624291
G Nck2 NCK adaptor protein 2 JBrowse link 9 50,246,767 50,373,307 RGD:1624291
G Nckap1 NCK-associated protein 1 JBrowse link 3 67,725,180 67,804,680 RGD:1624291
G Nckap1l NCK associated protein 1 like JBrowse link 7 145,068,239 145,113,507 RGD:1624291
RGD:1600115
G Nphs1 NPHS1 adhesion molecule, nephrin JBrowse link 1 88,922,346 88,950,560 RGD:1624291
RGD:1600115
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:1624291
G Pfn2 profilin 2 JBrowse link 2 147,953,858 147,959,692 RGD:1624291
RGD:1600115
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:1624291
RGD:1600115
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1624291
RGD:1600115
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:1624291
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1642965
G Rictor RPTOR independent companion of MTOR, complex 2 JBrowse link 2 56,013,898 56,105,818 RGD:1624291
G Snx9 sorting nexin 9 JBrowse link 1 46,780,142 46,826,250 RGD:1624291
G Tenm1 teneurin transmembrane protein 1 JBrowse link X
X
129,034,755
128,923,951
129,336,023
128,951,520
RGD:1624291
G Vasp vasodilator-stimulated phosphoprotein JBrowse link 1 80,170,608 80,185,882 RGD:1624291
RGD:13792537
positive regulation of actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmn1 formin 1 JBrowse link 3 104,783,093 105,170,761 RGD:1624291
RGD:1600115
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:1624291
G Magel2 MAGE family member L2 JBrowse link 1 123,015,404 123,019,945 RGD:1624291
G Scin scinderin JBrowse link 6 59,975,375 60,055,075 RGD:1624291
G Trim27 tripartite motif-containing 27 JBrowse link 17 45,613,863 45,626,212 RGD:1624291
G Was WASP actin nucleation promoting factor JBrowse link X 15,155,246 15,164,099 RGD:13792537
G Wasl WASP like actin nucleation promoting factor JBrowse link 4 51,677,722 51,726,212 RGD:13792537
G Whamm WASP homolog associated with actin, golgi membranes and microtubules JBrowse link 1 143,401,986 143,430,356 RGD:1624291
G Wipf1 WAS/WASL interacting protein family, member 1 JBrowse link 3 60,150,001 60,207,125 RGD:13792537
G Wipf2 WAS/WASL interacting protein family, member 2 JBrowse link 10 86,776,367 86,813,046 RGD:13792537
G Wipf3 WAS/WASL interacting protein family, member 3 JBrowse link 4 84,596,305 84,676,775 RGD:13792537
positive regulation of amyloid fibril formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:1624291
positive regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abi2 abl-interactor 2 JBrowse link 9 67,234,612 67,284,504 RGD:1624291
G Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex JBrowse link 4 145,559,206 145,574,438 RGD:1624291
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:1624291
G Fchsd2 FCH and double SH3 domains 2 JBrowse link 1 166,140,025 166,395,915 RGD:1624291
G Nckap1 NCK-associated protein 1 JBrowse link 3 67,725,180 67,804,680 RGD:1600115
RGD:1624291
G Was WASP actin nucleation promoting factor JBrowse link X 15,155,246 15,164,099 RGD:1600115
G Wasf1 WASP family member 1 JBrowse link 20 48,456,191 48,503,768 RGD:1624291
G Wasl WASP like actin nucleation promoting factor JBrowse link 4 51,677,722 51,726,212 RGD:1600115
positive regulation of collagen fibril organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 JBrowse link 16 20,039,969 20,052,277 RGD:1624291
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:1600115
RGD:1624291
positive regulation of microtubule depolymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:7241017
G Katnb1 katanin regulatory subunit B1 JBrowse link 19 10,340,027 10,360,319 RGD:1624291
G Spast spastin JBrowse link 6 22,230,067 22,282,166 RGD:1600115
G Stmn2 stathmin 2 JBrowse link 2 95,424,251 95,471,900 RGD:1624291
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 JBrowse link 12 47,698,915 47,737,902 RGD:8553293
positive regulation of microtubule nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ckap5 cytoskeleton associated protein 5 JBrowse link 3 80,424,320 80,526,583 RGD:1600115
RGD:1624291
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:1624291
RGD:1600115
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:1624291
RGD:1600115
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1624291
RGD:1600115
G LOC108348108 heat shock 70 kDa protein 1A JBrowse link 20 2,699,707 2,701,856 RGD:1600115
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:1600115
RGD:1624291
G Pde4dip phosphodiesterase 4D interacting protein JBrowse link 2 199,867,965 200,066,034 RGD:1624291
positive regulation of microtubule polymerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap9 A-kinase anchoring protein 9 JBrowse link 4 27,195,346 27,331,582 RGD:1624291
G Ankrd53 ankyrin repeat domain 53 JBrowse link 4 115,439,325 115,447,995 RGD:1624291
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:1624291
G Arl2 ADP-ribosylation factor like GTPase 2 JBrowse link 1 221,504,150 221,516,191 RGD:1600115
RGD:13792537
RGD:1624291
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1582162
G Cav3 caveolin 3 JBrowse link 4 144,382,945 144,398,919 RGD:1582162
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 JBrowse link 5 86,387,238 86,554,108 RGD:1600115
RGD:1624291
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:1624291
G Clip1 CAP-GLY domain containing linker protein 1 JBrowse link 12 38,345,203 38,452,650 RGD:1600115
RGD:1624291
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:1600115
RGD:1624291
G Drg1 developmentally regulated GTP binding protein 1 JBrowse link 14 83,460,540 83,476,568 RGD:1624291
G Fes FES proto-oncogene, tyrosine kinase JBrowse link 1 142,174,648 142,183,884 RGD:1624291
G Gda guanine deaminase JBrowse link 1 238,982,542 239,057,663 RGD:10047353
G Map1b microtubule-associated protein 1B JBrowse link 2 29,675,391 29,768,750 RGD:71122
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:1582322
G Mapre1 microtubule-associated protein, RP/EB family, member 1 JBrowse link 3 149,221,346 149,249,469 RGD:1624291
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1600115
RGD:1624291
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:1600115
RGD:1624291
G Nav3 neuron navigator 3 JBrowse link 7 52,164,805 52,508,145 RGD:1624291
G Nin ninein JBrowse link 6 92,423,412 92,527,776 RGD:1624291
G Numa1 nuclear mitotic apparatus protein 1 JBrowse link 1 167,044,544 167,091,453 RGD:1624291
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:1624291
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1624291
G Psrc1 proline and serine rich coiled-coil 1 JBrowse link 2 211,176,437 211,181,078 RGD:1624291
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rps3 ribosomal protein S3 JBrowse link 1 164,435,868 164,441,167 RGD:1624291
G Slain2 SLAIN motif family, member 2 JBrowse link 14 37,802,347 37,880,571 RGD:1624291
G Togaram1 TOG array regulator of axonemal microtubules 1 JBrowse link 6 86,713,588 86,780,134 RGD:1624291
positive regulation of sarcomere organization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp10 bone morphogenetic protein 10 JBrowse link 4 119,224,906 119,230,534 RGD:1624291
RGD:1600115
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:1624291
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:2312280
G Mylk3 myosin light chain kinase 3 JBrowse link 19 27,388,163 27,442,451 RGD:8554371
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1624291
positive regulation of stress fiber assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:1624291
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:1624291
G Arhgef10 Rho guanine nucleotide exchange factor 10 JBrowse link 16 79,725,629 79,817,065 RGD:1624291
RGD:13792537
G Arhgef10l Rho guanine nucleotide exchange factor 10 like JBrowse link 5 159,018,373 159,089,383 RGD:1624291
RGD:1600115
G Arhgef15 Rho guanine nucleotide exchange factor 15 JBrowse link 10 55,532,097 55,545,675 RGD:8554375
G Arhgef5 Rho guanine nucleotide exchange factor 5 JBrowse link 4 72,710,775 72,736,415 RGD:1624291
G Bag4 BAG cochaperone 4 JBrowse link 16 71,057,709 71,075,874 RGD:1624291
RGD:1600115
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:1624291
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link 17 43,050,282 43,339,403 RGD:1624291
G Ccdc88a coiled coil domain containing 88A JBrowse link 14 113,771,093 113,936,376 RGD:1600115
RGD:1624291
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:1624291
G Cd47 Cd47 molecule JBrowse link 11 53,511,485 53,575,754 RGD:625650
G Cdc42 cell division cycle 42 JBrowse link 5 155,690,267 155,728,385 RGD:1624291
G Epha1 Eph receptor A1 JBrowse link 4 71,749,100 71,763,681 RGD:1624291
RGD:1600115
G Evl Enah/Vasp-like JBrowse link 6 132,470,283 132,590,242 RGD:1624291
G Fhod1 formin homology 2 domain containing 1 JBrowse link 19 37,284,923 37,303,855 RGD:1624291
G Gpr65 G-protein coupled receptor 65 JBrowse link 6 122,248,528 122,256,115 RGD:1624291
G Itgb1bp1 integrin subunit beta 1 binding protein 1 JBrowse link 6 43,348,927 43,363,633 RGD:1624291
G Kiss1r KISS1 receptor JBrowse link 7 12,606,210 12,609,868 RGD:1357971
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:1624291
RGD:13792537
G Limk1 LIM domain kinase 1 JBrowse link 12 25,036,630 25,070,538 RGD:1624291
RGD:13792537
RGD:1600115
G LOC100909840 profilin-2-like JBrowse link 2 148,044,714 148,050,464 RGD:1600115
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:1624291
RGD:1600115
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:1624291
G Myoc myocilin JBrowse link 13 80,517,531 80,527,928 RGD:1600115
RGD:1624291
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:1624291
RGD:1600115
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:2324670
G Nrp1 neuropilin 1 JBrowse link 19 61,332,351 61,486,166 RGD:1624291
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:1624291
RGD:1600115
G Pdlim4 PDZ and LIM domain 4 JBrowse link 10 39,390,578 39,405,322 RGD:1300470
RGD:13432282
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:2324854
G Pfn2 profilin 2 JBrowse link 2 147,953,858 147,959,692 RGD:1600115
RGD:1624291
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E JBrowse link 10 74,548,270 74,679,858 RGD:1624291
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F JBrowse link 11 88,313,709 88,343,726 RGD:1624291
G Prkcq protein kinase C, theta JBrowse link 17 70,971,915 71,105,286 RGD:1625621
G Pxn paxillin JBrowse link 12 46,797,953 46,845,107 RGD:1624291
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:1624291
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:1624291
RGD:1600115
G Rgcc regulator of cell cycle JBrowse link 15 61,551,861 61,564,695 RGD:1624291
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:1624291
G Rhoc ras homolog family member C JBrowse link 2 207,271,692 207,278,010 RGD:1624291
G Rock2 Rho-associated coiled-coil containing protein kinase 2 JBrowse link 6 42,180,864 42,289,910 RGD:1600115
RGD:1624291
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:1624291
G Sdc4 syndecan 4 JBrowse link 3 160,872,503 160,891,190 RGD:2312327
G Serpinf2 serpin family F member 2 JBrowse link 10 62,264,247 62,272,353 RGD:1624291
G Sh3pxd2b SH3 and PX domains 2B JBrowse link 10 17,209,152 17,296,449 RGD:1624291
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:2300418
G Sorbs3 sorbin and SH3 domain containing 3 JBrowse link 15 51,859,004 51,895,707 RGD:1624291
G Synpo2l synaptopodin 2-like JBrowse link 15 4,064,706 4,074,151 RGD:1624291
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:2304338
G Tacr1 tachykinin receptor 1 JBrowse link 4 113,247,236 113,416,139 RGD:2304338
G Tesk1 testis associated actin remodelling kinase 1 JBrowse link 5 58,937,615 58,943,358 RGD:13461749
RGD:13792537
G Tgfb3 transforming growth factor, beta 3 JBrowse link 6 109,913,757 109,936,217 RGD:1624291
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:1624291
G Tpm1 tropomyosin 1 JBrowse link 8 72,814,737 72,841,496 RGD:8656006
G Tsc1 TSC complex subunit 1 JBrowse link 3 7,219,955 7,269,063 RGD:1601406
G Wnt11 Wnt family member 11 JBrowse link 1 163,794,136 163,813,756 RGD:1624291
G Wnt4 Wnt family member 4 JBrowse link 5 155,649,238 155,668,065 RGD:1624291
RGD:1600115
regulation of actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vil1 villin 1 JBrowse link 9 81,689,802 81,717,623 RGD:1624291
G Washc5 WASH complex subunit 5 JBrowse link 7 99,625,379 99,677,237 RGD:1600115
RGD:1624291
regulation of Arp2/3 complex-mediated actin nucleation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1ar adaptor-related protein complex 1 associated regulatory protein JBrowse link 2 232,146,418 232,178,813 RGD:1624291
G Arf1 ADP-ribosylation factor 1 JBrowse link 10 45,562,700 45,579,214 RGD:8553918
G Arfip1 ADP-ribosylation factor interacting protein 1 JBrowse link 2 183,503,250 183,582,798 RGD:13792537
G Arfip2 ADP-ribosylation factor interacting protein 2 JBrowse link 1 170,464,995 170,471,138 RGD:13792537
G Coro1b coronin 1B JBrowse link 1 219,397,827 219,403,253 RGD:10047170
G Pick1 protein interacting with PRKCA 1 JBrowse link 7 120,465,472 120,484,824 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      positive regulation of cellular process 5981
        positive regulation of cellular component organization 1286
          positive regulation of supramolecular fiber organization 214
            positive regulation of actin filament bundle assembly + 69
            positive regulation of actin filament depolymerization + 15
            positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly + 0
            positive regulation of actin filament polymerization + 100
            positive regulation of amyloid fibril formation 2
            positive regulation of cardiac myofibril assembly 0
            positive regulation of collagen fibril organization 2
            positive regulation of microtubule depolymerization 5
            positive regulation of microtubule polymerization + 34
            positive regulation of myosin II filament organization + 0
            positive regulation of sarcomere organization 5
Path 2
Term Annotations click to browse term
  biological_process 19439
    cellular process 18178
      cellular component organization or biogenesis 6367
        cellular component organization 6145
          regulation of cellular component organization 2556
            positive regulation of cellular component organization 1286
              positive regulation of supramolecular fiber organization 214
                positive regulation of actin filament bundle assembly + 69
                positive regulation of actin filament depolymerization + 15
                positive regulation of actin filament organization involved in mitotic actomyosin contractile ring assembly + 0
                positive regulation of actin filament polymerization + 100
                positive regulation of amyloid fibril formation 2
                positive regulation of cardiac myofibril assembly 0
                positive regulation of collagen fibril organization 2
                positive regulation of microtubule depolymerization 5
                positive regulation of microtubule polymerization + 34
                positive regulation of myosin II filament organization + 0
                positive regulation of sarcomere organization 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.