ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of miRNA transcription
Accession: GO:1902893
browse the term
Definition: Any process that modulates the frequency, rate or extent of microRNA (miRNA) gene transcription.
Synonyms: exact_synonym: regulation of miRNA gene transcription; regulation of microRNA gene transcription; regulation of pri-miRNA transcription by RNA polymerase II; regulation of pri-miRNA transcription from RNA polymerase II promoter; regulation of primary miRNA gene transcription
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Bmp4
bone morphogenetic protein 4
NOT|involved_in
ISO
(PMID:18548003)
BHF-UCL
PMID:18548003
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Ddx5
DEAD-box helicase 5
NOT|involved_in
ISO
(PMID:18548003)
BHF-UCL
PMID:18548003
NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
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Tgfb1
transforming growth factor beta 1
NOT|involved_in
ISO
(PMID:18548003)
BHF-UCL
PMID:18548003
NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
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App
amyloid beta precursor protein
involved_in
ISO
(PMID:24827165), (PMID:25152461)
ARUK-UCL
PMID:24827165 PMID:25152461
NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268
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Bmp4
bone morphogenetic protein 4
involved_in
ISO
(PMID:28124060)
BHF-UCL
PMID:28124060
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Esr1
estrogen receptor 1
involved_in
ISO
(PMID:20388878)
BHF-UCL
PMID:20388878
NCBI chrNW_004955439:9,588,631...9,953,606
Ensembl chrNW_004955439:9,588,201...9,963,353
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Hdac2
histone deacetylase 2
involved_in
ISO
(MGI:5754467|PMID:24675724)
BHF-UCL
PMID:24675724
MGI:5754467
NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
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Hdac4
histone deacetylase 4
involved_in
ISO
(MGI:5754467|PMID:24675724)
BHF-UCL
PMID:24675724
MGI:5754467
NCBI chrNW_004955542:1,629,691...1,886,160
Ensembl chrNW_004955542:1,629,691...1,886,210
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
ISO
(PMID:31368162)
BHF-UCL
PMID:31368162
NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
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Ncor1
nuclear receptor corepressor 1
involved_in
ISO
(PMID:20388878)
BHF-UCL
PMID:20388878
NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
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Ncor2
nuclear receptor corepressor 2
involved_in
ISO
(PMID:20388878)
BHF-UCL
PMID:20388878
NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
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Nfatc3
nuclear factor of activated T cells 3
involved_in
ISO
(PMID:23543060)
BHF-UCL
PMID:23543060
NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680
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Nfatc4
nuclear factor of activated T cells 4
involved_in
ISO
(PMID:23543060)
BHF-UCL
PMID:23543060
NCBI chrNW_004955409:35,931,208...35,941,555
Ensembl chrNW_004955409:35,931,173...35,940,696
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Nfib
nuclear factor I B
involved_in
ISO
(PMID:18384814)
BHF-UCL
PMID:18384814
NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
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Pdgfb
platelet derived growth factor subunit B
involved_in
ISO
(PMID:26493107)
BHF-UCL
PMID:26493107
NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
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Pou5f1
POU class 5 homeobox 1
involved_in
ISO
(PMID:19409607)
ARUK-UCL
PMID:19409607
NCBI chrNW_004955583:995,707...1,003,202
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Ppara
peroxisome proliferator activated receptor alpha
involved_in
ISO
(PMID:21636785)
BHF-UCL
PMID:21636785
NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
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Pparg
peroxisome proliferator activated receptor gamma
acts_upstream_of_or_within involved_in
ISO
(PMID:24751522) (PMID:28522568)
BHF-UCL
PMID:24751522 PMID:28522568
NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
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Rara
retinoic acid receptor alpha
involved_in
ISO
(PMID:28122350)
ARUK-UCL
PMID:28122350
NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
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Rela
RELA proto-oncogene, NF-kB subunit
involved_in
ISO
(PMID:23878390)
BHF-UCL
PMID:23878390
NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
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Smad3
SMAD family member 3
involved_in
ISO
(PMID:32141990)
BHF-UCL
PMID:32141990
NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:26687115)
BHF-UCL
PMID:26687115
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Srf
serum response factor
involved_in
ISO
(MGI:5688838|PMID:21303526)
BHF-UCL
PMID:21303526
MGI:5688838
NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
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Tgfb1
transforming growth factor beta 1
involved_in
ISO
(PMID:25605017)
ARUK-UCL
PMID:25605017
NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
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Tgfbr1
transforming growth factor beta receptor 1
involved_in
ISO
PMID:21704009
BHF-UCL
PMID:21704009
RGD:12792988
NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
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Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:27027434)
BHF-UCL
PMID:27027434
NCBI chrNW_004955410:22,003,981...22,005,483
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Yy1
YY1 transcription factor
involved_in
ISO
(MGI:5754467|PMID:24675724)
BHF-UCL
PMID:24675724
MGI:5754467
NCBI chrNW_004955438:21,341,374...21,377,674
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Znf512b
zinc finger protein 512B
involved_in
ISO
(PMID:20639536)
ARUK-UCL
PMID:20639536
NCBI chrNW_004955528:288,494...297,850
Ensembl chrNW_004955528:288,735...294,898
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Agt
angiotensinogen
acts_upstream_of
ISO
(PMID:30729664)
BHF-UCL
PMID:30729664
NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
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Apln
apelin
involved_in
ISO
(PMID:23263626)
BHF-UCL
PMID:23263626
NCBI chrNW_004955473:5,346,822...5,356,359
Ensembl chrNW_004955473:5,346,747...5,356,359
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Ar
androgen receptor
involved_in
ISO
(PMID:25802280)
BHF-UCL
PMID:25802280
NCBI chrNW_004955475:7,013,960...7,192,473
Ensembl chrNW_004955475:7,013,960...7,186,069
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Atoh8
atonal bHLH transcription factor 8
involved_in
ISO
(PMID:27780851)
BHF-UCL
PMID:27780851
NCBI chrNW_004955424:1,775,139...1,803,106
Ensembl chrNW_004955424:1,776,127...1,802,763
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Bmp2
bone morphogenetic protein 2
involved_in
ISO
(MGI:4939577|PMID:21145505)
BHF-UCL
PMID:21145505
MGI:4939577
NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
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Bmp4
bone morphogenetic protein 4
involved_in
ISO
(MGI:4939577|PMID:21145505)
BHF-UCL
PMID:21145505
MGI:4939577
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(MGI:4939577|PMID:21145505)
BHF-UCL
PMID:21145505
MGI:4939577
NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
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Ctcf
CCCTC-binding factor
involved_in
ISO
PMID:27124358
BHF-UCL
PMID:27124358
RGD:11344932
NCBI chrNW_004955484:9,041,226...9,092,924
Ensembl chrNW_004955484:9,042,524...9,064,927
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Egfr
epidermal growth factor receptor
involved_in
ISO
(PMID:21673316)
BHF-UCL
PMID:21673316
NCBI chrNW_004955456:321,222...456,431
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Egr1
early growth response 1
involved_in
ISO
(PMID:19307576)
ARUK-UCL
PMID:19307576
NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
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Ets1
ETS proto-oncogene 1, transcription factor
involved_in
ISO
(PMID:21711453)
BHF-UCL
PMID:21711453
NCBI chrNW_004955412:29,433,730...29,602,389
Ensembl chrNW_004955412:29,432,482...29,545,580
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Fos
Fos proto-oncogene, AP-1 transcription factor subunit
involved_in
ISO
PMID:18384814 (PMID:30670568)
BHF-UCL
PMID:18384814 PMID:30670568
RGD:10402042
NCBI chrNW_004955523:307,181...310,728
Ensembl chrNW_004955523:305,728...310,728
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Fosl1
FOS like 1, AP-1 transcription factor subunit
involved_in
ISO
(PMID:21673316)
BHF-UCL
PMID:21673316
NCBI chrNW_004955422:19,425,741...19,431,801
Ensembl chrNW_004955422:19,423,591...19,433,885
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Foxo3
forkhead box O3
involved_in
ISO
(MGI:4881905|PMID:19933931)
BHF-UCL
PMID:19933931
MGI:4881905
NCBI chrNW_004955411:33,655,958...33,770,829
Ensembl chrNW_004955411:33,655,958...33,770,829
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Gata2
GATA binding protein 2
involved_in
ISO
(PMID:27780851)
BHF-UCL
PMID:27780851
NCBI chrNW_004955429:15,326,551...15,334,774
Ensembl chrNW_004955429:15,327,113...15,336,460
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Gata3
GATA binding protein 3
involved_in
ISO
(PMID:26451614)
BHF-UCL
PMID:26451614
NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
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Gata4
GATA binding protein 4
involved_in
ISO
(MGI:5780531|PMID:25590961)
BHF-UCL
PMID:25590961
MGI:5780531
NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267
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Gnl3
G protein nucleolar 3
involved_in
ISO
(PMID:25569094)
BHF-UCL
PMID:25569094
NCBI chrNW_004955430:2,675,477...2,678,113
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Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in
ISO
(PMID:19782034) (MGI:6430928|PMID:25587068) (PMID:19141645), (PMID:24983504), (PMID:33108349)
ARUK-UCL BHF-UCL
PMID:19141645 PMID:19782034 PMID:24983504 PMID:25587068 PMID:33108349
MGI:6430928
NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
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Il10
interleukin 10
involved_in
ISO
(PMID:23071313)
ARUK-UCL
PMID:23071313
NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779
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Jun
Jun proto-oncogene, AP-1 transcription factor subunit
involved_in
ISO
PMID:18384814 (PMID:24375836)
BHF-UCL
PMID:18384814 PMID:24375836
RGD:10402042
NCBI chrNW_004955464:1,107,598...1,110,326
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Klf4
KLF transcription factor 4
involved_in
ISO
(PMID:23867820)
BHF-UCL
PMID:23867820
NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174
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Klf5
KLF transcription factor 5
involved_in
ISO
(PMID:28408180)
BHF-UCL
PMID:28408180
NCBI chrNW_004955404:33,642,604...33,665,445
Ensembl chrNW_004955404:33,644,077...33,658,094
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Mrtfa
myocardin related transcription factor A
involved_in
ISO
(PMID:23764775)
ARUK-UCL
PMID:23764775
NCBI chrNW_004955413:26,139,060...26,311,272
Ensembl chrNW_004955413:26,139,843...26,222,580
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Mrtfb
myocardin related transcription factor B
involved_in
ISO
(PMID:23764775)
ARUK-UCL
PMID:23764775
NCBI chrNW_004955442:4,542,700...4,733,646
Ensembl chrNW_004955442:4,547,829...4,733,724
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Myb
MYB proto-oncogene, transcription factor
involved_in
ISO
(PMID:25857263)
BHF-UCL
PMID:25857263
NCBI chrNW_004955439:1,523,516...1,560,185
Ensembl chrNW_004955439:1,521,292...1,560,220
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Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISO
(PMID:27791094)
ARUK-UCL
PMID:27791094
NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
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Myocd
myocardin
involved_in
ISO
(MGI:5519155|PMID:24068960), (MGI:6414695|PMID:28342807)
ARUK-UCL
PMID:24068960 PMID:28342807
MGI:5519155 MGI:6414695
NCBI chrNW_004955467:4,653,065...4,743,438
Ensembl chrNW_004955467:4,656,380...4,743,110
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Ngfr
nerve growth factor receptor
involved_in
ISO
(PMID:26268439)
BHF-UCL
PMID:26268439
NCBI chrNW_004955451:12,030,303...12,047,305
Ensembl chrNW_004955451:12,030,252...12,047,305
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Notch2
notch receptor 2
involved_in
ISO
(PMID:25323858)
BHF-UCL
PMID:25323858
NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
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Notch3
notch receptor 3
involved_in
ISO
(PMID:25323858)
BHF-UCL
PMID:25323858
NCBI chrNW_004955495:8,012,370...8,048,616
Ensembl chrNW_004955495:8,012,502...8,047,710
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Nr1h2
nuclear receptor subfamily 1 group H member 2
acts_upstream_of
ISO
(MGI:6446466|PMID:31501273)
ARUK-UCL
PMID:31501273
MGI:6446466
NCBI chrNW_004955559:731,630...736,973
Ensembl chrNW_004955559:730,670...737,505
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Nr2f1
nuclear receptor subfamily 2 group F member 1
acts_upstream_of_or_within
ISO
(PMID:24349493)
MGI
PMID:24349493
NCBI chrNW_004955418:18,615,548...18,622,984
Ensembl chrNW_004955418:18,614,995...18,624,584
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Nr3c1
nuclear receptor subfamily 3 group C member 1
involved_in
ISO
(PMID:27334923) (MGI:5616008|PMID:25510864)
ARUK-UCL BHF-UCL
PMID:25510864 PMID:27334923
MGI:5616008
NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
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Pax6
paired box 6
involved_in
ISO
(PMID:24802670)
BHF-UCL
PMID:24802670
NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
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Pdgfb
platelet derived growth factor subunit B
involved_in
ISO
(PMID:19088079)
BHF-UCL
PMID:19088079
NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
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Pparg
peroxisome proliferator activated receptor gamma
involved_in
ISO
(PMID:25704091), (PMID:28566713)
BHF-UCL
PMID:25704091 PMID:28566713
NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
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Prl
prolactin
involved_in
ISO
(PMID:23619365)
BHF-UCL
PMID:23619365
NCBI chrNW_004955483:4,495,257...4,503,377
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Rela
RELA proto-oncogene, NF-kB subunit
involved_in
ISO
PMID:20546595 (PMID:21806946) PMID:28484848 (PMID:23619365), (PMID:26268439)
BHF-UCL ARUK-UCL
PMID:20546595 PMID:21806946 PMID:23619365 PMID:26268439 PMID:28484848
RGD:12903243 RGD:13601996
NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
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Smad1
SMAD family member 1
involved_in
ISO
(MGI:4939577|PMID:21145505)
BHF-UCL
PMID:21145505
MGI:4939577
NCBI chrNW_004955428:1,357,398...1,429,521
Ensembl chrNW_004955428:1,361,085...1,429,948
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Smad3
SMAD family member 3
involved_in acts_upstream_of
ISO
(PMID:24378993) (PMID:30729664) (PMID:24378993), (PMID:26311719)
BHF-UCL
PMID:24378993 PMID:26311719 PMID:30729664
NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
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Smad4
SMAD family member 4
involved_in
ISO
(MGI:6094665|PMID:23426367)
BHF-UCL
PMID:23426367
MGI:6094665
NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
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Smad6
SMAD family member 6
involved_in
ISO
(MGI:4939577|PMID:21145505)
BHF-UCL
PMID:21145505
MGI:4939577
NCBI chrNW_004955450:9,005,332...9,070,790
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Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
involved_in
ISO
(PMID:25569094)
BHF-UCL
PMID:25569094
NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
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Spi1
Spi-1 proto-oncogene
involved_in
ISO
(PMID:20972335) (MGI:5693226|PMID:18384814)
BHF-UCL
PMID:18384814 PMID:20972335
MGI:5693226
NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
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Srebf1
sterol regulatory element binding transcription factor 1
involved_in
ISO
(MGI:5501359|PMID:23823476) (PMID:24296663), (PMID:31501273)
BHF-UCL
PMID:23823476 PMID:24296663 PMID:31501273
MGI:5501359
NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046
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Srebf2
sterol regulatory element binding transcription factor 2
involved_in
ISO
(MGI:5501359|PMID:23823476)
BHF-UCL
PMID:23823476
MGI:5501359
NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759
G
Srf
serum response factor
involved_in
ISO
(MGI:4354665|PMID:19578358), (MGI:5688838|PMID:21303526) (PMID:23764775)
BHF-UCL ARUK-UCL
PMID:19578358 PMID:21303526 PMID:23764775
MGI:4354665 MGI:5688838
NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
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Stat3
signal transducer and activator of transcription 3
involved_in
ISO
(PMID:19390056), (PMID:23820254) (MGI:5897552|PMID:20546595)
BHF-UCL
PMID:19390056 PMID:20546595 PMID:23820254
MGI:5897552
NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
G
Tead1
TEA domain transcription factor 1
involved_in
ISO
(PMID:26045994)
BHF-UCL
PMID:26045994
NCBI chrNW_004955414:28,166,562...28,341,275
Ensembl chrNW_004955414:28,175,543...28,333,856
G
Tert
telomerase reverse transcriptase
involved_in
ISO
(PMID:25569094)
BHF-UCL
PMID:25569094
NCBI chrNW_004955504:649,248...669,796
Ensembl chrNW_004955504:651,779...670,589
G
Tgfb1
transforming growth factor beta 1
involved_in
ISO
(PMID:26311719), (PMID:26493107)
BHF-UCL
PMID:26311719 PMID:26493107
NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
G
Tgfb2
transforming growth factor beta 2
involved_in
ISO
(PMID:25217442)
BHF-UCL
PMID:25217442
NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
G
Tgfbr1
transforming growth factor beta receptor 1
involved_in
ISO
PMID:21704009
BHF-UCL
PMID:21704009
RGD:12792988
NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
G
Tnf
tumor necrosis factor
acts_upstream_of
ISO
(PMID:22499991)
BHF-UCL
PMID:22499991
NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
ISO
(PMID:22499991) (PMID:30089260) (PMID:22578566) (PMID:20546595)
BHF-UCL ARUK-UCL
PMID:20546595 PMID:22499991 PMID:22578566 PMID:30089260
NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
G
Wt1
WT1 transcription factor
involved_in
ISO
(PMID:23042785)
ARUK-UCL
PMID:23042785
NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all