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ONTOLOGY REPORT - ANNOTATIONS


Term:late endosome to lysosome transport
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Accession:GO:1902774 term browser browse the term
Definition:The directed movement of substances from late endosome to lysosome.
Comment:an example of this is snapin in mouse (Q9Z266) in PMID:20920792 inferred from mutant phenotype
Synonyms:broad_synonym: prevacuolar compartment to lysosome transport


show annotations for term's descendants           Sort by:
 
late endosome to lysosome transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGD1359108 similar to RIKEN cDNA 3110043O21 ISO
IEA
ISS
(MGI:MGI:5779453|PMID:26989253)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26989253 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5779453 NCBI chr 5:50,666,444...50,691,523
Ensembl chr 5:50,668,040...50,684,409
JBrowse link
G Snapin SNAP-associated protein ISO MGI:MGI:3608768 (MGI:MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:MGI:4879078 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Vps39 VPS39 subunit of HOPS complex ISO (PMID:23167963) RGD PMID:23167963 NCBI chr 3:112,087,213...112,125,307
Ensembl chr 3:112,087,677...112,125,318
JBrowse link
G Vps41 VPS41 subunit of HOPS complex ISO (PMID:23167963) RGD PMID:23167963 NCBI chr17:48,643,754...48,810,633
Ensembl chr17:48,648,879...48,810,991
JBrowse link
negative regulation of late endosome to lysosome transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps35 VPS35 retromer complex component ISO (PMID:23563491) RGD PMID:23563491 NCBI chr19:27,464,937...27,500,636
Ensembl chr19:27,464,937...27,500,636
JBrowse link
positive regulation of late endosome to lysosome transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:21421027 RGD:9684860 NCBI chr10:45,562,700...45,579,214
Ensembl chr10:45,563,547...45,579,029
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20015
    cellular process 18788
      vacuolar transport 156
        lysosomal transport 115
          late endosome to lysosome transport 6
            late endosome to lysosome transport via multivesicular body sorting pathway 0
            negative regulation of late endosome to lysosome transport 1
            positive regulation of late endosome to lysosome transport 1
            regulation of late endosome to lysosome transport + 2
Path 2
Term Annotations click to browse term
  biological_process 20015
    localization 6487
      establishment of localization 4918
        transport 4774
          vacuolar transport 156
            lysosomal transport 115
              late endosome to lysosome transport 6
                late endosome to lysosome transport via multivesicular body sorting pathway 0
                negative regulation of late endosome to lysosome transport 1
                positive regulation of late endosome to lysosome transport 1
                regulation of late endosome to lysosome transport + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.