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ONTOLOGY REPORT - ANNOTATIONS


Term:late endosome to lysosome transport
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Accession:GO:1902774 term browser browse the term
Definition:The directed movement of substances from late endosome to lysosome.
Comment:an example of this is snapin in mouse (Q9Z266) in PMID:20920792 inferred from mutant phenotype
Synonyms:broad_synonym: prevacuolar compartment to lysosome transport


show annotations for term's descendants           Sort by:
 
late endosome to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(MGI:6508507|PMID:25637027)
(PMID:28325809)
UniProt
RGD
PMID:25637027 PMID:28325809 GO_REF:0000024 MGI:6508507 NCBI chr 4:141,748,634...141,792,605
Ensembl chr 4:141,748,587...141,792,596
JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in ISO
ISS
(PMID:28325809)
GO_REF:0000024
RGD
UniProt
PMID:28325809 GO_REF:0000024 NCBI chr10:88,313,837...88,366,182
Ensembl chr10:88,314,651...88,362,412
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5779453|PMID:26989253)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:26989253 GO_REF:0000024 GO_REF:0000107 MGI:5779453 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4879078|PMID:20920792) RGD PMID:20920792 MGI:4879078 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Vps39 VPS39 subunit of HOPS complex involved_in ISO (PMID:23167963) RGD PMID:23167963 NCBI chr 3:107,266,846...107,304,884
Ensembl chr 3:107,267,310...107,304,975
JBrowse link
G Vps41 VPS41 subunit of HOPS complex involved_in ISO (PMID:23167963) RGD PMID:23167963 NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
JBrowse link
negative regulation of late endosome to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:23563491) RGD PMID:23563491 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
positive regulation of late endosome to lysosome transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP-ribosylation factor 1 IMP RGD PMID:21421027 RGD:9684860 NCBI chr10:43,997,983...44,014,543
Ensembl chr10:43,997,986...44,014,434
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      vacuolar transport 163
        lysosomal transport 120
          late endosome to lysosome transport 8
            late endosome to lysosome transport via multivesicular body sorting pathway 0
            negative regulation of late endosome to lysosome transport 1
            positive regulation of late endosome to lysosome transport 1
            regulation of late endosome to lysosome transport + 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          vacuolar transport 163
            lysosomal transport 120
              late endosome to lysosome transport 8
                late endosome to lysosome transport via multivesicular body sorting pathway 0
                negative regulation of late endosome to lysosome transport 1
                positive regulation of late endosome to lysosome transport 1
                regulation of late endosome to lysosome transport + 2
paths to the root