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ONTOLOGY REPORT - ANNOTATIONS


Term:endoribonuclease complex
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Accession:GO:1902555 term browser browse the term
Definition:A protein complex which is capable of endoribonuclease activity.
Comment:An example is IRE1 in S. cerevisiae (UniProt ID P32361) in PMID:18191223 (inferred from direct assay).
Synonyms:related_synonym: Ire1 complex dimer;   Ire1 complex homodimer;   Ire1 complex homooligomer


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Las1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Las1l LAS1-like, ribosome biogenesis factor part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:60,851,969...60,873,717
Ensembl chr  X:60,851,962...60,873,687
JBrowse link
microprocessor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgcr8 DGCR8 microprocessor complex subunit part_of ISO
IBA
(PMID:15574589)
PMID:21873635
RGD PMID:15574589 PMID:21873635 RGD:13792537 NCBI chr11:82,704,673...82,737,251
Ensembl chr11:82,704,729...82,737,242
JBrowse link
G Drosha drosha ribonuclease III part_of ISO (PMID:15574589) RGD PMID:15574589 NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
JBrowse link
mitochondrial ribonuclease P complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 part_of ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25925575), (PMID:28888424)
UniProt
Ensembl
RGD
PMID:25925575 PMID:28888424 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,089,152...21,091,597
Ensembl chr  X:21,089,122...21,109,488
JBrowse link
G Prorp protein only RNase P catalytic subunit part_of ISO
ISS
IBA
(PMID:25953853)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:25953853 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:72,669,659...72,762,419
Ensembl chr 6:72,670,847...72,762,416
JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:44,584,388...44,589,466
Ensembl chr11:44,584,113...44,589,568
JBrowse link
multimeric ribonuclease P complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pop1 POP1 homolog, ribonuclease P/MRP subunit part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141
JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit part_of ISS
ISO
GO_REF:0000024
(PMID:16723659), (PMID:30454648)
UniProt
RGD
PMID:16723659 PMID:30454648 GO_REF:0000024 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443
JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336
JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674
JBrowse link
G Rpp14 ribonuclease P/MRP subunit p14 part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr15:16,837,796...16,847,970
Ensembl chr15:16,837,743...16,847,765
JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106
JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 part_of ISO
ISS
(PMID:16723659), (PMID:30454648)
GO_REF:0000024
RGD
UniProt
PMID:16723659 PMID:30454648 GO_REF:0000024 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732
JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 part_of ISO (PMID:16723659), (PMID:30454648) RGD PMID:16723659 PMID:30454648 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952
JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 part_of IBA
ISO
PMID:21873635
(PMID:30454648)
RGD PMID:30454648 PMID:21873635 RGD:13792537 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431
JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 part_of IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:30454648)
UniProt
RGD
PMID:30454648 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr17:28,947,730...28,956,790
Ensembl chr17:28,947,734...28,956,788
JBrowse link
nucleolar ribonuclease P complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pop1 POP1 homolog, ribonuclease P/MRP subunit part_of IBA
ISO
PMID:21873635
(PMID:8918471)
RGD PMID:8918471 PMID:21873635 RGD:13792537 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141
JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit part_of IBA
ISO
PMID:21873635
(MGI:2149119|PMID:11413139)
RGD PMID:11413139 PMID:21873635 MGI:2149119, RGD:13792537 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336
JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674
JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106
JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952
JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431
JBrowse link
ribonuclease P complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pop4 POP4 homolog, ribonuclease P/MRP subunit part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443
JBrowse link
RISC-loading complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 part_of ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 part_of ISS
ISO
IEA
GO_REF:0000024
(MGI:5616320|PMID:16357216)
GO_REF:0000107
(PMID:15973356), (PMID:17531811), (PMID:18178619), (PMID:19820710), (PMID:19966796), (PMID:23661684)
UniProt
RGD
Ensembl
PMID:15973356 PMID:16357216 PMID:17531811 PMID:18178619 PMID:19820710 More... GO_REF:0000024 GO_REF:0000107 MGI:5616320 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 part_of ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 part_of ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Dhx9 DExH-box helicase 9 part_of ISO (PMID:17531811) RGD PMID:17531811 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Dicer1 dicer 1 ribonuclease III part_of ISO (PMID:15973356), (PMID:16357216), (PMID:17531811), (PMID:18178619), (PMID:19820710), (PMID:23661684) RGD PMID:15973356 PMID:16357216 PMID:17531811 PMID:18178619 PMID:19820710 More... NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Mir27a microRNA 27a part_of ISO (MGI:5438907|PMID:22503104) RGD PMID:22503104 MGI:5438907 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mir28 microRNA 28 part_of ISO (MGI:5438907|PMID:22503104) RGD PMID:22503104 MGI:5438907 NCBI chr11:75,975,523...75,975,608
Ensembl chr11:75,975,523...75,975,608
JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 part_of ISO
IEA
(PMID:23661684)
GO_REF:0000107
RGD
Ensembl
PMID:23661684 GO_REF:0000107 NCBI chr 3:61,575,447...61,594,393
Ensembl chr 3:61,575,447...61,594,347
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex part_of ISO
ISS
(PMID:15973356), (PMID:16357216), (PMID:17531811), (PMID:18178619), (PMID:19820710), (PMID:23661684)
GO_REF:0000024
RGD
UniProt
PMID:15973356 PMID:16357216 PMID:17531811 PMID:18178619 PMID:19820710 More... GO_REF:0000024 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
G Zfp36 zinc finger protein 36 colocalizes_with
part_of
ISO
IEA
ISS
(PMID:15766526)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15766526 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
tRNA-intron endonuclease complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 part_of ISO
ISS
(PMID:17495927)
GO_REF:0000024
RGD
UniProt
PMID:17495927 GO_REF:0000024 NCBI chr 3:69,806,774...69,818,633
Ensembl chr 3:69,806,778...69,810,421
JBrowse link
G Tsen2 tRNA splicing endonuclease subunit 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:148,602,805...148,638,219
Ensembl chr 4:148,602,863...148,638,215
JBrowse link
G Tsen34 tRNA splicing endonuclease subunit 34 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:65,517,324...65,525,194 JBrowse link
G Tsen34l1 tRNA splicing endonuclease subunit 34-like 1 part_of IEA GO_REF:0000104 UniProt GO_REF:0000104
G Tsen54 tRNA splicing endonuclease subunit 54 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:101,041,607...101,050,088
Ensembl chr10:101,042,503...101,050,087
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      catalytic complex 1464
        endoribonuclease complex 32
          Ire1 complex 0
          Las1 complex 1
          RISC-loading complex 11
          ribonuclease III complex + 2
          ribonuclease P complex + 13
          tRNA-intron endonuclease complex 5
paths to the root