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ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to cell junction
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Accession:GO:1902414 term browser browse the term
Definition:A process in which a protein is transported to, or maintained in, a location within a cell junction.
Synonyms:exact_synonym: protein localisation in cell junction;   protein localisation to cell junction;   protein localization in cell junction


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protein localization to cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004624785:11,549,805...11,698,029
Ensembl chrNW_004624785:11,551,687...11,697,921
JBrowse link
G Fermt2 FERM domain containing kindlin 2 acts_upstream_of_or_within ISO (PMID:30254023) ARUK-UCL PMID:30254023 NCBI chrNW_004624731:16,168,179...16,247,747
Ensembl chrNW_004624731:16,168,207...16,246,778
JBrowse link
G Heg1 heart development protein with EGF like domains 1 involved_in ISO (PMID:26780829) UniProt PMID:26780829 NCBI chrNW_004624731:1,015,889...1,092,875
Ensembl chrNW_004624731:1,020,805...1,092,995
JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:8,644,002...8,707,257
Ensembl chrNW_004624812:8,643,921...8,707,351
JBrowse link
G Kif3a kinesin family member 3A involved_in ISO (PMID:24338362) BHF-UCL PMID:24338362 NCBI chrNW_004624733:39,354,360...39,406,574
Ensembl chrNW_004624733:39,354,232...39,407,121
JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 acts_upstream_of_or_within ISO (PMID:24841562) MGI PMID:24841562 NCBI chrNW_004624885:1,399,235...1,403,669
Ensembl chrNW_004624885:1,398,505...1,403,789
JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 acts_upstream_of_or_within ISO (PMID:24841562) MGI PMID:24841562 NCBI chrNW_004624830:7,296,133...7,311,907
Ensembl chrNW_004624830:7,296,458...7,312,186
JBrowse link
G Marveld3 MARVEL domain containing 3 acts_upstream_of_or_within ISO (PMID:24567356) MGI PMID:24567356 NCBI chrNW_004624746:13,898,857...13,914,032 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624784:14,997,533...15,058,971
Ensembl chrNW_004624784:14,997,424...15,059,761
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004624731:37,425,966...37,567,938
Ensembl chrNW_004624731:37,433,809...37,568,677
JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004624845:4,816,734...6,426,548
Ensembl chrNW_004624845:5,028,404...6,421,986
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in ISO (PMID:23728742) UniProt PMID:23728742 NCBI chrNW_004624740:14,940,161...14,941,561
Ensembl chrNW_004624740:14,939,445...14,941,819
JBrowse link
G Kif5a kinesin family member 5A involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624802:10,375,132...10,409,575
Ensembl chrNW_004624802:10,375,774...10,409,566
JBrowse link
G Kif5b kinesin family member 5B involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870
JBrowse link
G Kif5c kinesin family member 5C involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004624866:1,526,647...1,698,113
Ensembl chrNW_004624866:1,526,638...1,698,301
JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004624804:10,611,657...10,632,199
Ensembl chrNW_004624804:10,611,672...10,630,881
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:21775604
(PMID:28259553)
UniProt PMID:21775604 PMID:28259553 RGD:13673858 NCBI chrNW_004624913:481,236...529,083
Ensembl chrNW_004624913:481,207...529,070
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO PMID:21775604 UniProt PMID:21775604 RGD:13673858 NCBI chrNW_004624792:166,846...368,906
Ensembl chrNW_004624792:307,608...363,568
JBrowse link
anterograde axonal transport of neurotransmitter receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neto1 neuropilin and tolloid like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:8,013,955...8,128,867
Ensembl chrNW_004624806:8,014,353...8,127,078
JBrowse link
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapsn receptor associated protein of the synapse ISO RGD PMID:19344765 RGD:8549750 NCBI chrNW_004624767:1,350,820...1,358,107
Ensembl chrNW_004624767:1,351,370...1,358,187
JBrowse link
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:75,107,294...75,169,527
Ensembl chrNW_004624730:75,113,012...75,169,561
JBrowse link
G Snap23 synaptosome associated protein 23 involved_in ISO PMID:26839408 SynGO PMID:26839408 RGD:12050145 NCBI chrNW_004624804:9,609,777...9,643,670
Ensembl chrNW_004624804:9,610,308...9,641,933
JBrowse link
G Snap47 synaptosome associated protein 47 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004624937:695,245...728,656
Ensembl chrNW_004624937:687,988...730,674
JBrowse link
G Stx1b syntaxin 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911
JBrowse link
G Stx3 syntaxin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624864:1,054,130...1,091,071
Ensembl chrNW_004624864:1,054,284...1,090,398
JBrowse link
G Stx4 syntaxin 4 involved_in ISO PMID:20434989 SynGO PMID:20434989 RGD:13702188 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058
JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649
JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 acts_upstream_of_or_within
involved_in
ISO (PMID:29107521)
(PMID:15620359)
MGI
BHF-UCL
PMID:15620359 PMID:29107521 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004624767:21,659,677...21,768,696
Ensembl chrNW_004624767:21,668,466...21,771,304
JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004624730:43,175,690...43,191,689
Ensembl chrNW_004624730:43,181,820...43,191,531
JBrowse link
G Zdhhc12 zDHHC palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776
JBrowse link
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam22 ADAM metallopeptidase domain 22 involved_in ISO (PMID:16990550) SynGO PMID:16990550 NCBI chrNW_004624809:5,190,974...5,448,317
Ensembl chrNW_004624809:5,197,147...5,448,283
JBrowse link
G C1ql2 complement C1q like 2 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624732:26,031,010...26,034,163
Ensembl chrNW_004624732:26,032,021...26,034,552
JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624796:11,239,297...11,246,800
Ensembl chrNW_004624796:11,239,077...11,248,111
JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in ISO (PMID:18753375) SynGO PMID:18753375 NCBI chrNW_004624752:11,062,059...11,172,357
Ensembl chrNW_004624752:11,062,002...11,170,406
JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624782:9,319,318...9,408,620
Ensembl chrNW_004624782:9,319,277...9,408,821
JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in ISO (PMID:23872597) SynGO PMID:23872597 NCBI chrNW_004624832:2,529,708...2,546,916
Ensembl chrNW_004624832:2,529,705...2,546,908
JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 involved_in ISO (PMID:23522044) SynGO PMID:23522044 NCBI chrNW_004624835:6,599,726...6,646,615
Ensembl chrNW_004624835:6,599,661...6,643,301
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:20133708)
PMID:12805297
SynGO PMID:12805297 PMID:20133708 RGD:13702333 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004624845:4,816,734...6,426,548
Ensembl chrNW_004624845:5,028,404...6,421,986
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISO (PMID:22184199) SynGO PMID:22184199 NCBI chrNW_004624795:3,373,313...3,391,509
Ensembl chrNW_004624795:3,373,000...3,391,602
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISO (PMID:22184199) SynGO PMID:22184199 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO PMID:25284783 SynGO PMID:25284783 RGD:13702191 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910
JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chrNW_004624739:28,995,173...29,074,354
Ensembl chrNW_004624739:28,995,179...29,073,813
JBrowse link
G Gphn gephyrin involved_in ISO PMID:8264797
(PMID:10531433)
SynGO PMID:8264797 PMID:10531433 RGD:13702318 NCBI chrNW_004624734:33,871,664...34,483,770
Ensembl chrNW_004624734:33,870,997...34,483,508
JBrowse link
G Gpsm2 G protein signaling modulator 2 involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chrNW_004624772:4,634,005...4,704,280
Ensembl chrNW_004624772:4,651,326...4,704,280
JBrowse link
G Lgi1 leucine rich glioma inactivated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:5,024,691...5,060,248
Ensembl chrNW_004624737:5,024,414...5,060,329
JBrowse link
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISO (PMID:28279354) SynGO PMID:28279354 NCBI chrNW_004624731:4,194,321...4,222,400
Ensembl chrNW_004624731:4,194,321...4,222,105
JBrowse link
G Neto1 neuropilin and tolloid like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:8,013,955...8,128,867
Ensembl chrNW_004624806:8,014,353...8,127,078
JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:26720915 SynGO PMID:26720915 RGD:11531528 NCBI chrNW_004624914:636,348...690,708
Ensembl chrNW_004624914:636,417...690,694
JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO PMID:29024665 SynGO PMID:29024665 RGD:13702141 NCBI chrNW_004624801:9,628,878...9,637,869
Ensembl chrNW_004624801:9,628,882...9,637,859
JBrowse link
G Nptx2 neuronal pentraxin 2 involved_in ISO PMID:10399937 SynGO PMID:10399937 RGD:13702159 NCBI chrNW_004624740:32,125,693...32,136,671
Ensembl chrNW_004624740:32,125,715...32,136,659
JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) SynGO PMID:27986928 NCBI chrNW_004624752:9,315,834...9,335,205
Ensembl chrNW_004624752:9,315,853...9,336,043
JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004624734:22,161,837...23,757,367
Ensembl chrNW_004624734:22,163,166...23,692,660
JBrowse link
G Olfm2 olfactomedin 2 involved_in ISO (PMID:25218043) SynGO PMID:25218043 NCBI chrNW_004624828:2,134,728...2,200,354
Ensembl chrNW_004624828:2,135,245...2,200,332
JBrowse link
G Rapsn receptor associated protein of the synapse involved_in ISO (PMID:27839998)
(PMID:8653787)
(PMID:14622576), (PMID:27839998)
SynGO
MGI
PMID:8653787 PMID:14622576 PMID:27839998 NCBI chrNW_004624767:1,350,820...1,358,107
Ensembl chrNW_004624767:1,351,370...1,358,187
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in ISO (PMID:37591201) SynGO PMID:37591201 NCBI chrNW_004624740:4,100,196...4,234,098
Ensembl chrNW_004624740:4,109,100...4,234,009
JBrowse link
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004624872:2,460,308...2,830,569
Ensembl chrNW_004624872:2,461,362...2,825,161
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:26330558) SynGO PMID:26330558 NCBI chrNW_004624912:1,952,053...2,213,196
Ensembl chrNW_004624912:1,953,838...2,172,561
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:15297461 SynGO PMID:15297461 RGD:2306456 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111
JBrowse link
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004624730:75,107,294...75,169,527
Ensembl chrNW_004624730:75,113,012...75,169,561
JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Erbin erbb2 interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815
JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:1,558,364...1,954,695
Ensembl chrNW_004624802:1,264,833...1,964,202
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624872:1,215,698...1,264,723
Ensembl chrNW_004624872:1,233,797...1,264,722
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:753,111...778,563
Ensembl chrNW_004624893:753,111...778,539
JBrowse link
G Lrrc1 leucine rich repeat containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624850:1,105,844...1,232,595
Ensembl chrNW_004624850:1,105,926...1,234,504
JBrowse link
G Lrrc7 leucine rich repeat containing 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:25,849,355...26,384,417
Ensembl chrNW_004624742:25,863,434...26,243,376
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:21,507,068...21,529,057
Ensembl chrNW_004624755:21,506,250...21,529,052
JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chrNW_004624781:6,699,926...6,718,020
Ensembl chrNW_004624781:6,699,926...6,718,545
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chrNW_004624908:1,119,356...1,132,029
Ensembl chrNW_004624908:1,116,610...1,132,111
JBrowse link
G Scrib scribble planar cell polarity protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Tax1bp3 Tax1 binding protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:6,318,879...6,323,835
Ensembl chrNW_004624786:6,318,879...6,323,816
JBrowse link
G Vamp4 vesicle associated membrane protein 4 involved_in ISO PMID:34496238 SynGO PMID:34496238 RGD:405650337 NCBI chrNW_004624771:9,986,835...10,034,112 JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:28384478) SynGO PMID:28384478 NCBI chrNW_004624914:160,483...188,534
Ensembl chrNW_004624914:160,483...188,490
JBrowse link
positive regulation of protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsg3 desmoglein 3 involved_in ISO (PMID:22294297) UniProt PMID:22294297 NCBI chrNW_004624770:1,384,847...1,416,833 JBrowse link
positive regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnd1 catenin delta 1 involved_in ISO (PMID:18343367) UniProt PMID:18343367 NCBI chrNW_004624864:2,953,357...3,000,355
Ensembl chrNW_004624864:2,951,556...3,006,529
JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:27338829) UniProt PMID:27338829 NCBI chrNW_004624770:1,315,021...1,363,472
Ensembl chrNW_004624770:1,313,916...1,364,153
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26706435) ARUK-UCL PMID:26706435 NCBI chrNW_004624870:33,293...122,536 JBrowse link
positive regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004624860:3,710,121...3,737,617
Ensembl chrNW_004624860:3,709,139...3,738,221
JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:20655099) ParkinsonsUK-UCL PMID:20655099 NCBI chrNW_004624849:2,320,887...2,421,099 JBrowse link
G Nlgn1 neuroligin 1 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD
MGI
PMID:15681343 PMID:24613359 RGD:8553420 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172
JBrowse link
protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta involved_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512
JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO (PMID:17765678) MGI PMID:17765678 NCBI chrNW_004624754:11,033,649...11,155,271
Ensembl chrNW_004624754:11,036,716...11,155,256
JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO (PMID:17237226) BHF-UCL PMID:17237226 NCBI chrNW_004624805:6,430,817...6,636,865
Ensembl chrNW_004624805:6,429,918...6,577,479
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:16611247) BHF-UCL PMID:16611247 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
protein localization to bicellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin gamma 1 involved_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637
JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chrNW_004624794:12,042,627...12,113,762
Ensembl chrNW_004624794:12,042,533...12,113,886
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624746:20,028,952...20,068,029
Ensembl chrNW_004624746:20,033,008...20,057,595
JBrowse link
G F11r F11 receptor involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624794:346,281...367,132
Ensembl chrNW_004624794:346,387...367,428
JBrowse link
G Flna filamin A ISO RGD PMID:22872576 RGD:7207404 NCBI chrNW_004624946:812,278...836,307
Ensembl chrNW_004624946:812,287...837,273
JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624828:529,529...604,996
Ensembl chrNW_004624828:536,926...605,119
JBrowse link
G Cgnl1 cingulin like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:14,215,252...14,357,705
Ensembl chrNW_004624781:14,215,723...14,357,705
JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:16917092) BHF-UCL PMID:16917092 NCBI chrNW_004624756:18,036,103...18,083,379
Ensembl chrNW_004624756:18,035,892...18,083,336
JBrowse link
G Hepacam hepatic and glial cell adhesion molecule involved_in ISO (PMID:21419380) MGI PMID:21419380 NCBI chrNW_004624927:922,272...939,429
Ensembl chrNW_004624927:919,908...939,762
JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:21679692) ARUK-UCL PMID:21679692 NCBI chrNW_004624742:29,631,391...29,723,981
Ensembl chrNW_004624742:29,689,965...29,723,981
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004624730:61,809,876...61,879,755
Ensembl chrNW_004624730:61,817,300...61,879,755
JBrowse link
G Tjp1 tight junction protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:2,826,848...3,034,195
Ensembl chrNW_004624768:2,828,324...3,034,302
JBrowse link
G Tjp2 tight junction protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:3,833,402...4,009,385
Ensembl chrNW_004624736:3,834,548...3,878,828
JBrowse link
G Tjp3 tight junction protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,374,678...6,398,483
Ensembl chrNW_004624828:6,383,767...6,398,359
JBrowse link
protein localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc15 zDHHC palmitoyltransferase 15 involved_in ISO PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chrNW_004624836:5,193,710...5,404,547
Ensembl chrNW_004624836:5,194,177...5,400,516
JBrowse link
protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12676993) MGI PMID:12676993 NCBI chrNW_004624760:777,208...800,525
Ensembl chrNW_004624760:776,873...801,354
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004624824:7,128,169...7,513,360
Ensembl chrNW_004624824:7,137,909...7,507,910
JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004624801:4,697,891...4,713,771
Ensembl chrNW_004624801:4,697,512...4,712,276
JBrowse link
G Zdhhc2 zDHHC palmitoyltransferase 2 involved_in ISO PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chrNW_004624769:22,078,361...22,151,679
Ensembl chrNW_004624769:22,080,073...22,151,626
JBrowse link
protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004624875:969,857...2,049,531
Ensembl chrNW_004624875:969,626...2,049,061
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004624801:10,106,815...10,173,191
Ensembl chrNW_004624801:10,106,750...10,173,188
JBrowse link
G Bsn bassoon presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450
JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within
ISO (PMID:15496675)
(PMID:15978582)
PMID:15620359
PMID:12097487
BHF-UCL
MGI
UniProt
PMID:12097487 PMID:15496675 PMID:15620359 PMID:15978582 RGD:8553478 RGD:8553937 NCBI chrNW_004624786:9,811,201...9,835,660
Ensembl chrNW_004624786:9,811,780...9,837,100
JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004624770:13,543,893...13,841,213
Ensembl chrNW_004624770:13,542,680...13,841,352
JBrowse link
G Homer1 homer scaffold protein 1 involved_in ISO PMID:12867517 BHF-UCL PMID:12867517 RGD:8554389 NCBI chrNW_004624869:3,878,646...4,012,211
Ensembl chrNW_004624869:3,880,001...4,012,240
JBrowse link
G Klc1 kinesin light chain 1 involved_in ISO PMID:19861499 UniProt PMID:19861499 RGD:5683640 NCBI chrNW_004624734:1,221,531...1,275,002
Ensembl chrNW_004624734:1,219,270...1,266,754
JBrowse link
G LOC106008950 protein piccolo-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:31,086,290...31,142,979 JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:19285470) MGI PMID:19285470 NCBI chrNW_004624749:22,695,726...22,698,161
Ensembl chrNW_004624749:22,695,241...22,698,604
JBrowse link
G Mpp4 MAGUK p55 scaffold protein 4 acts_upstream_of_or_within ISO (PMID:16520334) MGI PMID:16520334 NCBI chrNW_004624899:175,920...205,398 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359), (PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023
JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359), (PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:12796785) BHF-UCL PMID:12796785 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565
JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) BHF-UCL PMID:21664258 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISO (PMID:18272690) BHF-UCL PMID:18272690 NCBI chrNW_004624832:3,934,525...3,978,607
Ensembl chrNW_004624832:3,938,170...3,976,870
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:6,173,160...6,229,487
Ensembl chrNW_004624790:6,172,762...6,229,487
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:17,434,733...17,726,348
Ensembl chrNW_004624744:17,434,686...17,727,127
JBrowse link
protein localization to tricellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ildr1 immunoglobulin like domain containing receptor 1 involved_in ISO (PMID:25217574) UniProt PMID:25217574 NCBI chrNW_004624912:269,657...300,537
Ensembl chrNW_004624912:267,185...300,550
JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISO (PMID:21245199) ARUK-UCL PMID:21245199 NCBI chrNW_004624794:8,271,642...8,286,816
Ensembl chrNW_004624794:8,271,159...8,285,967
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:24889144) MGI PMID:24889144 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 acts_upstream_of_or_within ISO (PMID:24889144) MGI PMID:24889144 NCBI chrNW_004624733:42,998,948...43,048,392
Ensembl chrNW_004624733:42,999,339...43,048,285
JBrowse link
regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:26,265,590...26,286,203
Ensembl chrNW_004624755:26,266,614...26,288,079
JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in ISO (PMID:19503082) SynGO PMID:19503082 NCBI chrNW_004624842:3,265,880...3,443,535
Ensembl chrNW_004624842:3,265,880...3,459,412
JBrowse link
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (PMID:21123580) SynGO PMID:21123580 NCBI chrNW_004624781:13,195,390...13,321,823
Ensembl chrNW_004624781:13,195,755...13,321,823
JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 involved_in ISO (PMID:30683685) SynGO PMID:30683685 NCBI chrNW_004624730:4,211,189...4,346,119
Ensembl chrNW_004624730:4,212,901...4,345,849
JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO PMID:28973854 SynGO PMID:28973854 RGD:405650304 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:27707967) SynGO PMID:27707967 NCBI chrNW_004624730:3,417,356...3,488,300
Ensembl chrNW_004624730:3,417,347...3,488,879
JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO PMID:19796685 SynGO PMID:19796685 RGD:405650367 NCBI chrNW_004624770:15,092,706...15,303,990
Ensembl chrNW_004624770:15,094,969...15,287,128
JBrowse link
G Exoc4 exocyst complex component 4 involved_in ISO PMID:12738960 SynGO PMID:12738960 RGD:8554028 NCBI chrNW_004624783:2,315,128...3,165,343
Ensembl chrNW_004624783:2,316,300...3,165,255
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:33436612) SynGO PMID:33436612 NCBI chrNW_004624786:9,857,370...9,859,675
Ensembl chrNW_004624786:9,857,370...9,860,063
JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO PMID:24367106 SynGO PMID:24367106 RGD:13702206 NCBI chrNW_004624730:50,484,763...50,492,443
Ensembl chrNW_004624730:50,488,887...50,492,405
JBrowse link
G Gpc4 glypican 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624797:13,005,310...13,116,414
Ensembl chrNW_004624797:13,002,646...13,116,180
JBrowse link
G Gpc6 glypican 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624879:97,125...1,196,747
Ensembl chrNW_004624879:97,257...1,192,604
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:23864697 SynGO PMID:23864697 RGD:13702314 NCBI chrNW_004624731:28,178,647...28,368,784
Ensembl chrNW_004624731:28,178,628...28,366,420
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:12202034) SynGO PMID:12202034 NCBI chrNW_004624766:21,907,423...21,913,414
Ensembl chrNW_004624766:21,911,241...21,913,653
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 involved_in ISO (PMID:27009485) SynGO PMID:27009485 NCBI chrNW_004624909:462,724...564,989
Ensembl chrNW_004624909:460,626...565,133
JBrowse link
G Kalrn kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chrNW_004624731:54,934...756,707
Ensembl chrNW_004624731:121,122...752,942
JBrowse link
G Kif2c kinesin family member 2C involved_in ISO (PMID:35138249) SynGO PMID:35138249 NCBI chrNW_004624906:633,635...660,149
Ensembl chrNW_004624906:633,754...660,254
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:22593065 SynGO PMID:22593065 RGD:13702450 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004624781:6,222,365...6,285,398
Ensembl chrNW_004624781:6,222,365...6,285,531
JBrowse link
G Nbea neurobeachin involved_in ISO (PMID:29847800) SynGO PMID:29847800 NCBI chrNW_004624776:1,784,253...2,502,324
Ensembl chrNW_004624776:1,784,133...2,502,864
JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:28717010 SynGO PMID:28717010 RGD:155230759 NCBI chrNW_004624914:636,348...690,708
Ensembl chrNW_004624914:636,417...690,694
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:28143929) SynGO PMID:28143929 NCBI chrNW_004624903:1,863,110...1,912,299
Ensembl chrNW_004624903:1,863,337...1,910,177
JBrowse link
G Olfm1 olfactomedin 1 involved_in ISO PMID:30067977 SynGO PMID:30067977 RGD:405650285 NCBI chrNW_004624760:2,842,177...2,876,966
Ensembl chrNW_004624760:2,842,340...2,876,958
JBrowse link
G Prkcz protein kinase C zeta involved_in ISO PMID:18667614 SynGO PMID:18667614 RGD:13702194 NCBI chrNW_004624818:7,758,192...7,846,950
Ensembl chrNW_004624818:7,759,770...7,847,208
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in ISO (PMID:12202034) SynGO PMID:12202034 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in ISO PMID:19734897 SynGO PMID:19734897 RGD:2314692 NCBI chrNW_004624787:10,062,677...10,369,132
Ensembl chrNW_004624787:10,062,717...10,369,632
JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (PMID:28096412) SynGO PMID:28096412 NCBI chrNW_004624730:9,314,308...9,683,324
Ensembl chrNW_004624730:9,522,166...9,683,365
JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (PMID:23035106) SynGO PMID:23035106 NCBI chrNW_004624730:49,087,876...49,497,981
Ensembl chrNW_004624730:49,090,222...49,497,646
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455
JBrowse link
G Vps26b VPS26, retromer complex component B involved_in ISO (PMID:34965419) SynGO PMID:34965419 NCBI chrNW_004624812:8,783,350...8,804,755
Ensembl chrNW_004624812:8,783,378...8,804,753
JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO (PMID:23739967) SynGO PMID:23739967 NCBI chrNW_004624877:662,595...851,762
Ensembl chrNW_004624877:661,998...850,431
JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:753,111...778,563
Ensembl chrNW_004624893:753,111...778,539
JBrowse link
regulation of protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcl vinculin involved_in ISO (PMID:26923917) ARUK-UCL PMID:26923917 NCBI chrNW_004624754:7,484,759...7,590,108
Ensembl chrNW_004624754:7,484,773...7,590,108
JBrowse link
regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zDHHC palmitoyltransferase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:1,715,907...1,740,414
Ensembl chrNW_004624746:1,715,809...1,740,075
JBrowse link
regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (PMID:27307232) UniProt PMID:27307232 NCBI chrNW_004624736:1,175,103...1,218,251
Ensembl chrNW_004624736:1,201,988...1,214,971
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:23676497) UniProt PMID:23676497 NCBI chrNW_004624730:62,001,547...62,223,098
Ensembl chrNW_004624730:62,002,280...62,223,319
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17650
    localization 5205
      macromolecule localization 2907
        cellular macromolecule localization 2515
          protein localization 2503
            protein localization to cell junction 154
              protein localization to cell-cell junction + 28
              protein localization to synapse + 117
paths to the root