Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:protein localization to cell junction
go back to main search page
Accession:GO:1902414 term browser browse the term
Definition:A process in which a protein is transported to, or maintained in, a location within a cell junction.
Synonyms:exact_synonym: protein localisation in cell junction;   protein localisation to cell junction;   protein localization in cell junction

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
protein localization to cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004955439:14,324,910...14,428,846
Ensembl chrNW_004955439:14,326,793...14,428,850 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 acts_upstream_of_or_within ISO (PMID:30254023) ARUK-UCL PMID:30254023 NCBI chrNW_004955409:10,285,780...10,327,286
Ensembl chrNW_004955409:10,285,793...10,327,468 		JBrowse link
G Heg1 heart development protein with EGF like domains 1 involved_in ISO (PMID:26780829) UniProt PMID:26780829 NCBI chrNW_004955427:24,035,193...24,115,483 JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO (PMID:19060272) ARUK-UCL PMID:19060272 NCBI chrNW_004955412:34,901,850...34,967,394
Ensembl chrNW_004955412:34,901,681...34,967,394 		JBrowse link
G Kif3a kinesin family member 3A involved_in ISO (PMID:24338362) BHF-UCL PMID:24338362 NCBI chrNW_004955408:4,072,823...4,115,975
Ensembl chrNW_004955408:4,069,639...4,115,998 		JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 acts_upstream_of_or_within ISO (PMID:24841562) MGI PMID:24841562 NCBI chrNW_004955545:2,237,506...2,242,070
Ensembl chrNW_004955545:2,236,868...2,242,137 		JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 acts_upstream_of_or_within ISO (PMID:24841562) MGI PMID:24841562 NCBI chrNW_004955496:7,789,210...7,809,143
Ensembl chrNW_004955496:7,788,997...7,809,143 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 acts_upstream_of_or_within ISO (PMID:22512338) MGI PMID:22512338 NCBI chrNW_004955427:11,639,942...11,731,910
Ensembl chrNW_004955427:11,606,909...11,724,004 		JBrowse link
anterograde axonal protein transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004955414:7,247,248...9,171,664
Ensembl chrNW_004955414:7,850,450...9,171,815 		JBrowse link
G Hspb1 heat shock protein family B (small) member 1 involved_in ISO (PMID:23728742) UniProt PMID:23728742 NCBI chrNW_004955844:8,094...9,565
Ensembl chrNW_004955844:7,790...10,004 		JBrowse link
G Kif5a kinesin family member 5A involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004955458:5,264,274...5,310,962
Ensembl chrNW_004955458:5,287,111...5,310,962 		JBrowse link
G Kif5b kinesin family member 5B involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004955429:23,632,246...23,678,797
Ensembl chrNW_004955429:23,631,282...23,678,562 		JBrowse link
G Kif5c kinesin family member 5C involved_in ISO PMID:23576431 UniProt PMID:23576431 RGD:13673742 NCBI chrNW_004955440:14,754,931...14,854,090
Ensembl chrNW_004955440:14,754,639...14,854,406 		JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (PMID:26609151) ARUK-UCL PMID:26609151 NCBI chrNW_004955416:10,052,964...10,073,318
Ensembl chrNW_004955416:10,053,010...10,071,421 		JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in ISO PMID:21775604
(PMID:28259553)		 UniProt PMID:21775604 PMID:28259553 RGD:13673858 NCBI chrNW_004955442:15,498,909...15,545,298
Ensembl chrNW_004955442:15,498,909...15,545,298 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO PMID:21775604 UniProt PMID:21775604 RGD:13673858 NCBI chrNW_004955402:39,357,500...39,415,530
Ensembl chrNW_004955402:39,357,500...39,415,530 		JBrowse link
anterograde axonal transport of neurotransmitter receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neto1 neuropilin and tolloid like 1 involved_in ISO (PMID:28680963) SynGO PMID:28680963 NCBI chrNW_004955402:56,262,137...56,376,105
Ensembl chrNW_004955402:56,262,137...56,376,142 		JBrowse link
establishment of protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapsn receptor associated protein of the synapse ISO RGD PMID:19344765 RGD:8549750 NCBI chrNW_004955422:826,556...834,483
Ensembl chrNW_004955422:826,727...834,289 		JBrowse link
exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in ISO (PMID:32931550) SynGO PMID:32931550 NCBI chrNW_004955420:26,231,597...26,280,516
Ensembl chrNW_004955420:26,229,840...26,280,516 		JBrowse link
G Snap23 synaptosome associated protein 23 involved_in ISO PMID:26839408 SynGO PMID:26839408 RGD:12050145 NCBI chrNW_004955416:9,191,123...9,225,103
Ensembl chrNW_004955416:9,190,623...9,225,103 		JBrowse link
G Snap47 synaptosome associated protein 47 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004955581:486,087...525,171
Ensembl chrNW_004955581:491,526...525,223 		JBrowse link
G Stx3 syntaxin 3 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004955511:4,183,210...4,219,528
Ensembl chrNW_004955511:4,196,114...4,218,961 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (PMID:23395379) SynGO PMID:23395379 NCBI chrNW_004955467:8,793,296...8,796,771
Ensembl chrNW_004955467:8,793,296...8,796,771 		JBrowse link
gephyrin clustering involved in postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn2 neuroligin 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:29107521)
(PMID:15620359)		 MGI
BHF-UCL		 PMID:15620359 PMID:29107521 NCBI chrNW_004955467:9,504,974...9,520,059
Ensembl chrNW_004955467:9,504,974...9,520,059 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359), (PMID:21424692) BHF-UCL PMID:15620359 PMID:21424692 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) BHF-UCL PMID:21424692 NCBI chrNW_004955422:20,444,109...20,551,870
Ensembl chrNW_004955422:20,391,722...20,551,870 		JBrowse link
G Slitrk3 SLIT and NTRK like family member 3 acts_upstream_of_or_within ISO (PMID:29107521) MGI PMID:29107521 NCBI chrNW_004955448:14,846,976...14,852,612
Ensembl chrNW_004955448:14,846,976...14,852,612 		JBrowse link
G Zdhhc12 zDHHC palmitoyltransferase 12 involved_in ISO (PMID:25025157) UniProt PMID:25025157 NCBI chrNW_004955570:1,131,234...1,133,909
Ensembl chrNW_004955570:1,131,234...1,133,909 		JBrowse link
neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam22 ADAM metallopeptidase domain 22 involved_in ISO (PMID:16990550) SynGO PMID:16990550 NCBI chrNW_004955432:5,306,018...5,536,282
Ensembl chrNW_004955432:5,305,611...5,536,282 		JBrowse link
G C1ql2 complement C1q like 2 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004955459:10,569,064...10,571,064
Ensembl chrNW_004955459:10,568,359...10,573,078 		JBrowse link
G C1ql3 complement C1q like 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004955429:11,287,486...11,296,716
Ensembl chrNW_004955429:11,287,486...11,296,716 		JBrowse link
G Cacng2 calcium voltage-gated channel auxiliary subunit gamma 2 involved_in ISO (PMID:18753375) SynGO PMID:18753375 NCBI chrNW_004955413:23,136,369...23,248,231
Ensembl chrNW_004955413:23,132,896...23,248,231 		JBrowse link
G Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 involved_in ISO (PMID:18753375) SynGO PMID:18753375 NCBI chrNW_004955493:2,742,096...2,841,353
Ensembl chrNW_004955493:2,742,096...2,841,403 		JBrowse link
G Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 involved_in ISO (PMID:23872597) SynGO PMID:23872597 NCBI chrNW_004955604:242,627...260,594
Ensembl chrNW_004955604:241,170...260,594 		JBrowse link
G Cnih3 cornichon family AMPA receptor auxiliary protein 3 involved_in ISO (PMID:23522044) SynGO PMID:23522044 NCBI chrNW_004955520:818,584...854,340
Ensembl chrNW_004955520:815,239...842,715 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO PMID:12805297
(PMID:20133708)		 SynGO PMID:12805297 PMID:20133708 RGD:13702333 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
G Dlg2 discs large MAGUK scaffold protein 2 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004955414:7,247,248...9,171,664
Ensembl chrNW_004955414:7,850,450...9,171,815 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISO (PMID:17046693) SynGO PMID:17046693 NCBI chrNW_004955467:9,691,733...9,715,872
Ensembl chrNW_004955467:9,690,469...9,715,872 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISO (PMID:22184199) SynGO PMID:22184199 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISO (PMID:22184199) SynGO PMID:22184199 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO PMID:25284783 SynGO PMID:25284783 RGD:13702191 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051 		JBrowse link
G Gnai1 G protein subunit alpha i1 involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chrNW_004955410:5,388,184...5,467,022
Ensembl chrNW_004955410:5,388,184...5,467,022 		JBrowse link
G Gphn gephyrin involved_in ISO PMID:8264797
(PMID:10531433)		 SynGO PMID:8264797 PMID:10531433 RGD:13702318 NCBI chrNW_004955466:3,017,474...3,526,375
Ensembl chrNW_004955466:3,016,479...3,526,231 		JBrowse link
G Gpsm2 G protein signaling modulator 2 involved_in ISO PMID:16299499 SynGO PMID:16299499 RGD:405650352 NCBI chrNW_004955435:12,334,462...12,387,262
Ensembl chrNW_004955435:12,334,462...12,387,262 		JBrowse link
G Lgi1 leucine rich glioma inactivated 1 involved_in ISO (PMID:20133599) SynGO PMID:20133599 NCBI chrNW_004955507:268,032...304,949
Ensembl chrNW_004955507:267,892...305,026 		JBrowse link
G Lhfpl4 LHFPL tetraspan subfamily member 4 involved_in ISO (PMID:28279354) SynGO PMID:28279354 NCBI chrNW_004955561:1,066,799...1,142,099
Ensembl chrNW_004955561:1,066,799...1,142,099 		JBrowse link
G Neto1 neuropilin and tolloid like 1 involved_in ISO (PMID:26720915) SynGO PMID:26720915 NCBI chrNW_004955402:56,262,137...56,376,105
Ensembl chrNW_004955402:56,262,137...56,376,142 		JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:26720915 SynGO PMID:26720915 RGD:11531528 NCBI chrNW_004955474:8,035,874...8,106,397
Ensembl chrNW_004955474:8,035,874...8,106,397 		JBrowse link
G Nptx1 neuronal pentraxin 1 involved_in ISO PMID:29024665 SynGO PMID:29024665 RGD:13702141 NCBI chrNW_004955506:2,447,429...2,456,612
Ensembl chrNW_004955506:2,447,109...2,456,965 		JBrowse link
G Nptx2 neuronal pentraxin 2 involved_in ISO PMID:10399937 SynGO PMID:10399937 RGD:13702159 NCBI chrNW_004955460:14,437,755...14,448,932
Ensembl chrNW_004955460:14,437,755...14,448,964 		JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) SynGO PMID:27986928 NCBI chrNW_004955413:24,924,464...24,941,417
Ensembl chrNW_004955413:24,925,784...24,942,292 		JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (PMID:27133466) SynGO PMID:27133466 NCBI chrNW_004955438:2,023,863...3,583,671
Ensembl chrNW_004955438:2,097,229...3,583,937 		JBrowse link
G Olfm2 olfactomedin 2 involved_in ISO (PMID:25218043) SynGO PMID:25218043 NCBI chrNW_004955495:1,264,831...1,328,877
Ensembl chrNW_004955495:1,264,831...1,328,877 		JBrowse link
G Rapsn receptor associated protein of the synapse involved_in ISO (PMID:8653787)
(PMID:27839998)
(PMID:14622576), (PMID:27839998)		 MGI
SynGO		 PMID:8653787 PMID:14622576 PMID:27839998 NCBI chrNW_004955422:826,556...834,483
Ensembl chrNW_004955422:826,727...834,289 		JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 involved_in ISO (PMID:37591201) SynGO PMID:37591201 NCBI chrNW_004955456:3,949,885...4,075,622
Ensembl chrNW_004955456:3,951,428...4,075,624 		JBrowse link
neurotransmitter receptor transport to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn1 calsyntenin 1 involved_in ISO (PMID:24966372) SynGO PMID:24966372 NCBI chrNW_004955486:3,706,969...3,813,858
Ensembl chrNW_004955486:3,780,516...3,813,858 		JBrowse link
G Mapk10 mitogen-activated protein kinase 10 involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458 		JBrowse link
G Mylk myosin light chain kinase involved_in ISO (PMID:26330558) SynGO PMID:26330558 NCBI chrNW_004955427:22,760,432...23,008,432
Ensembl chrNW_004955427:22,762,221...22,970,508 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:15297461 SynGO PMID:15297461 RGD:2306456 NCBI chrNW_004955524:1,403,811...1,416,005
Ensembl chrNW_004955524:1,403,811...1,416,005 		JBrowse link
G Sacm1l SAC1 like phosphatidylinositide phosphatase involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chrNW_004955420:26,231,597...26,280,516
Ensembl chrNW_004955420:26,229,840...26,280,516 		JBrowse link
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grip1 glutamate receptor interacting protein 1 involved_in ISO (PMID:20956289) SynGO PMID:20956289 NCBI chrNW_004955458:12,970,858...13,179,369
Ensembl chrNW_004955458:12,967,089...13,214,838 		JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in ISO (PMID:20956289) SynGO PMID:20956289 NCBI chrNW_004955429:17,132,520...17,177,547
Ensembl chrNW_004955429:17,134,158...17,160,036 		JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in ISO (PMID:16037816) SynGO PMID:16037816 NCBI chrNW_004955514:5,273,810...5,294,925
Ensembl chrNW_004955514:5,273,810...5,295,710 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chrNW_004955450:9,638,761...9,656,291
Ensembl chrNW_004955450:9,638,761...9,656,603 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chrNW_004955524:1,403,811...1,416,005
Ensembl chrNW_004955524:1,403,811...1,416,005 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 involved_in ISO PMID:34496238 SynGO PMID:34496238 RGD:405650337 NCBI chrNW_004955406:12,223,736...12,260,506
Ensembl chrNW_004955406:12,223,736...12,260,317 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:28384478) SynGO PMID:28384478 NCBI chrNW_004955448:207,582...240,264
Ensembl chrNW_004955448:204,991...240,160 		JBrowse link
positive regulation of protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsg3 desmoglein 3 involved_in ISO (PMID:22294297) UniProt PMID:22294297 NCBI chrNW_004955402:18,781,511...18,811,675
Ensembl chrNW_004955402:18,790,243...18,810,305 		JBrowse link
positive regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnd1 catenin delta 1 involved_in ISO (PMID:18343367) UniProt PMID:18343367 NCBI chrNW_004955511:2,658,879...2,705,992
Ensembl chrNW_004955511:2,658,858...2,703,958 		JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:27338829) UniProt PMID:27338829 NCBI chrNW_004955402:18,826,400...18,876,188 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26706435) ARUK-UCL PMID:26706435 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188 		JBrowse link
positive regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 acts_upstream_of_or_within ISO (PMID:24613359) MGI PMID:24613359 NCBI chrNW_004955413:4,690,637...4,719,929
Ensembl chrNW_004955413:4,690,637...4,719,929 		JBrowse link
G Mapt microtubule associated protein tau involved_in ISO (PMID:20655099) ParkinsonsUK-UCL PMID:20655099 NCBI chrNW_004955478:10,222,439...10,271,439
Ensembl chrNW_004955478:10,225,823...10,271,442 		JBrowse link
G Nlgn1 neuroligin 1 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004955420:3,360,745...4,171,587
Ensembl chrNW_004955420:3,549,021...4,167,493 		JBrowse link
G Nlgn2 neuroligin 2 acts_upstream_of_or_within ISO (PMID:24613359) RGD
MGI		 PMID:15681343 PMID:24613359 RGD:8553420 NCBI chrNW_004955467:9,504,974...9,520,059
Ensembl chrNW_004955467:9,504,974...9,520,059 		JBrowse link
G Nlgn3 neuroligin 3 ISO RGD PMID:15681343 RGD:8553420 NCBI chrNW_004955475:10,712,170...10,735,857
Ensembl chrNW_004955475:10,712,170...10,735,857 		JBrowse link
protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta involved_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO (PMID:17765678) MGI PMID:17765678 NCBI chrNW_004955437:14,510,488...14,628,768
Ensembl chrNW_004955437:14,510,488...14,628,768 		JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO (PMID:17237226) BHF-UCL PMID:17237226 NCBI chrNW_004955462:1,933,364...2,154,473
Ensembl chrNW_004955462:1,938,424...2,154,507 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:16611247) BHF-UCL PMID:16611247 NCBI chrNW_004955454:2,461,526...2,482,734
Ensembl chrNW_004955454:2,461,760...2,482,098 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955416:28,640,807...28,869,717
Ensembl chrNW_004955416:28,654,905...28,870,555 		JBrowse link
protein localization to bicellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:28880272 RGD:13703098 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Actg1 actin gamma 1 involved_in ISO (PMID:22855531) ARUK-UCL PMID:22855531 NCBI chrNW_004955506:1,546,678...1,549,611
Ensembl chrNW_004955506:1,546,678...1,552,105 		JBrowse link
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) UniProt PMID:18332111 NCBI chrNW_004955468:770,573...841,859
Ensembl chrNW_004955468:770,573...842,209 		JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955433:22,957,718...22,994,515
Ensembl chrNW_004955433:22,967,960...22,992,924 		JBrowse link
G F11r F11 receptor involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955468:12,764,968...12,785,956
Ensembl chrNW_004955468:12,765,874...12,785,929 		JBrowse link
G Flna filamin A ISO RGD PMID:22872576 RGD:7207404 NCBI chrNW_004955580:874,233...895,172
Ensembl chrNW_004955580:874,233...895,232 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955416:28,640,807...28,869,717
Ensembl chrNW_004955416:28,654,905...28,870,555 		JBrowse link
protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955563:1,745,202...1,823,411
Ensembl chrNW_004955563:1,746,838...1,772,772 		JBrowse link
G Cgnl1 cingulin like 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955450:16,785,358...16,913,718
Ensembl chrNW_004955450:16,785,080...16,871,515 		JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:16917092) BHF-UCL PMID:16917092 NCBI chrNW_004955465:6,356,970...6,391,206
Ensembl chrNW_004955465:6,356,863...6,392,207 		JBrowse link
G Hepacam hepatic and glial cell adhesion molecule involved_in ISO (PMID:21419380) MGI PMID:21419380 NCBI chrNW_004955412:25,981,235...25,998,296
Ensembl chrNW_004955412:25,980,460...25,998,482 		JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:21679692) ARUK-UCL PMID:21679692 NCBI chrNW_004955423:25,501,989...25,581,826
Ensembl chrNW_004955423:25,524,075...25,580,604 		JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955420:12,893,760...12,930,955
Ensembl chrNW_004955420:12,892,845...12,930,955 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) ARUK-UCL PMID:25753039 NCBI chrNW_004955416:28,640,807...28,869,717
Ensembl chrNW_004955416:28,654,905...28,870,555 		JBrowse link
protein localization to postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc15 zDHHC palmitoyltransferase 15 involved_in ISO PMID:31189538 UniProt PMID:31189538 RGD:25671406 NCBI chrNW_004955562:1,468,373...1,588,298
Ensembl chrNW_004955562:1,466,897...1,588,681 		JBrowse link
protein localization to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 acts_upstream_of_or_within ISO (PMID:12676993) MGI PMID:12676993 NCBI chrNW_004955513:5,154,864...5,178,636
Ensembl chrNW_004955513:5,154,864...5,178,636 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004955442:8,171,114...8,565,187
Ensembl chrNW_004955442:8,174,232...8,562,059 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C acts_upstream_of_or_within ISO (PMID:15317856) MGI PMID:15317856 NCBI chrNW_004955553:1,729,431...1,746,754
Ensembl chrNW_004955553:1,729,860...1,737,751 		JBrowse link
G Zdhhc2 zDHHC palmitoyltransferase 2 involved_in ISO PMID:25589740 UniProt PMID:25589740 RGD:21201275 NCBI chrNW_004955463:315,531...345,712
Ensembl chrNW_004955463:315,531...345,716 		JBrowse link
protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic2 acid sensing ion channel subunit 2 acts_upstream_of_or_within ISO (PMID:19571134) MGI PMID:19571134 NCBI chrNW_004955481:7,850,730...8,093,255
Ensembl chrNW_004955481:7,850,710...8,871,794 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 ISO RGD PMID:15758177 RGD:9684984 NCBI chrNW_004955506:1,868,624...1,936,786
Ensembl chrNW_004955506:1,868,624...1,936,786 		JBrowse link
G Bsn bassoon presynaptic cytomatrix protein involved_in ISO (PMID:25652077) ParkinsonsUK-UCL PMID:25652077 NCBI chrNW_004955532:1,527,336...1,578,394
Ensembl chrNW_004955532:1,527,477...1,570,670 		JBrowse link
G Cdk5 cyclin dependent kinase 5 acts_upstream_of_or_within ISO (PMID:18054859) MGI PMID:18054859 NCBI chrNW_004955491:5,491,744...5,497,280
Ensembl chrNW_004955491:5,491,744...5,497,280 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:15496675)
(PMID:15978582)
PMID:12097487
PMID:15620359		 BHF-UCL
MGI
UniProt		 PMID:12097487 PMID:15496675 PMID:15620359 PMID:15978582 RGD:8553478 RGD:8553937 NCBI chrNW_004955467:9,691,733...9,715,872
Ensembl chrNW_004955467:9,690,469...9,715,872 		JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004955402:6,809,126...7,105,356
Ensembl chrNW_004955402:6,451,864...7,105,411 		JBrowse link
G Homer1 homer scaffold protein 1 involved_in ISO PMID:12867517 BHF-UCL PMID:12867517 RGD:8554389 NCBI chrNW_004955425:21,644,577...21,774,843
Ensembl chrNW_004955425:21,644,571...21,775,735 		JBrowse link
G Klc1 kinesin light chain 1 involved_in ISO PMID:19861499 UniProt PMID:19861499 RGD:5683640 NCBI chrNW_004955538:2,462,491...2,503,398
Ensembl chrNW_004955538:2,470,473...2,503,398 		JBrowse link
G Lrrtm1 leucine rich repeat transmembrane neuronal 1 acts_upstream_of_or_within ISO (PMID:19285470) MGI PMID:19285470 NCBI chrNW_004955424:6,322,284...6,337,550
Ensembl chrNW_004955424:6,322,284...6,337,550 		JBrowse link
G Mpp4 MAGUK p55 scaffold protein 4 acts_upstream_of_or_within ISO (PMID:16520334) MGI PMID:16520334 NCBI chrNW_004955403:109,353...147,442
Ensembl chrNW_004955403:109,353...147,035 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:15620359), (PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 NCBI chrNW_004955420:3,360,745...4,171,587
Ensembl chrNW_004955420:3,549,021...4,167,493 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (PMID:15620359), (PMID:22960622) BHF-UCL PMID:15620359 PMID:22960622 NCBI chrNW_004955467:9,504,974...9,520,059
Ensembl chrNW_004955467:9,504,974...9,520,059 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:12796785) BHF-UCL PMID:12796785 NCBI chrNW_004955441:16,230,977...17,178,003
Ensembl chrNW_004955441:16,234,070...17,178,005 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO (PMID:25652077) ParkinsonsUK-UCL PMID:25652077 NCBI chrNW_004955410:2,998,345...3,334,056
Ensembl chrNW_004955410:3,152,202...3,292,920 		JBrowse link
G Reln reelin involved_in ISO (PMID:21664258) BHF-UCL PMID:21664258 NCBI chrNW_004955410:8,424,439...8,863,966
Ensembl chrNW_004955410:8,424,394...8,863,969 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISO (PMID:18272690) BHF-UCL PMID:18272690 NCBI chrNW_004955559:522,466...566,275
Ensembl chrNW_004955559:523,765...564,472 		JBrowse link
protein localization to tricellular tight junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ildr1 immunoglobulin like domain containing receptor 1 involved_in ISO (PMID:25217574) UniProt PMID:25217574 NCBI chrNW_004955427:21,304,460...21,333,170
Ensembl chrNW_004955427:21,304,890...21,322,261 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISO (PMID:21245199) ARUK-UCL PMID:21245199 NCBI chrNW_004955468:4,548,774...4,563,341
Ensembl chrNW_004955468:4,548,775...4,563,988 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:24889144) MGI PMID:24889144 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 acts_upstream_of_or_within ISO (PMID:24889144) MGI PMID:24889144 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981 		JBrowse link
regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in ISO (PMID:22284181) SynGO PMID:22284181 NCBI chrNW_004955514:359,174...376,916
Ensembl chrNW_004955514:359,174...376,916 		JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1 like 1 involved_in ISO (PMID:19503082) SynGO PMID:19503082 NCBI chrNW_004955422:25,338,135...25,456,376
Ensembl chrNW_004955422:25,336,888...25,440,893 		JBrowse link
regulation of neurotransmitter receptor localization to postsynaptic specialization membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (PMID:21123580) SynGO PMID:21123580 NCBI chrNW_004955450:15,853,372...15,927,966
Ensembl chrNW_004955450:15,853,366...15,928,200 		JBrowse link
G Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 involved_in ISO (PMID:30683685) SynGO PMID:30683685 NCBI chrNW_004955532:2,163,529...2,283,509
Ensembl chrNW_004955532:2,163,529...2,283,508 		JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004955415:4,247,307...4,307,402
Ensembl chrNW_004955415:4,247,014...4,307,458 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISO PMID:28973854 SynGO PMID:28973854 RGD:405650304 NCBI chrNW_004955433:8,788,867...8,845,925
Ensembl chrNW_004955433:8,788,655...8,845,925 		JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:27707967) SynGO PMID:27707967 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1 like 3 involved_in ISO PMID:19796685 SynGO PMID:19796685 RGD:405650367 NCBI chrNW_004955402:5,459,586...5,674,745
Ensembl chrNW_004955402:5,590,724...5,675,340 		JBrowse link
G Exoc4 exocyst complex component 4 involved_in ISO PMID:12738960 SynGO PMID:12738960 RGD:8554028 NCBI chrNW_004955410:33,937,825...34,672,790
Ensembl chrNW_004955410:33,935,320...34,673,764 		JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISO (PMID:33436612) SynGO PMID:33436612 NCBI chrNW_004955467:9,667,938...9,670,067
Ensembl chrNW_004955467:9,667,941...9,670,067 		JBrowse link
G Ghsr growth hormone secretagogue receptor involved_in ISO PMID:24367106 SynGO PMID:24367106 RGD:13702206 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215 		JBrowse link
G Gpc4 glypican 4 involved_in ISO PMID:22722203 SynGO PMID:22722203 RGD:13702461 NCBI chrNW_004955473:1,546,615...1,655,822
Ensembl chrNW_004955473:1,546,326...1,655,822 		JBrowse link
G Gpc6 glypican 6 involved_in ISO PMID:22722203 SynGO PMID:22722203 RGD:13702461 NCBI chrNW_004955404:15,429,811...16,504,973
Ensembl chrNW_004955404:15,433,962...16,504,351 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO PMID:23864697 SynGO PMID:23864697 RGD:13702314 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137 		JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:12202034) SynGO PMID:12202034 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333 		JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 involved_in ISO (PMID:27009485) SynGO PMID:27009485 NCBI chrNW_004955475:285,977...369,380
Ensembl chrNW_004955475:284,168...369,400 		JBrowse link
G Kalrn kalirin RhoGEF kinase involved_in ISO PMID:18031682 SynGO PMID:18031682 RGD:12050112 NCBI chrNW_004955427:23,184,751...23,823,128
Ensembl chrNW_004955427:23,184,739...23,816,811 		JBrowse link
G Kif2c kinesin family member 2C involved_in ISO (PMID:35138249) SynGO PMID:35138249 NCBI chrNW_004955464:13,453,637...13,475,447
Ensembl chrNW_004955464:13,453,217...13,475,322 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:22593065 SynGO PMID:22593065 RGD:13702450 NCBI chrNW_004955410:6,739,115...7,295,027
Ensembl chrNW_004955410:6,400,242...7,294,924 		JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:12202034 SynGO PMID:12202034 RGD:13702166 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648 		JBrowse link
G Nbea neurobeachin involved_in ISO (PMID:29847800) SynGO PMID:29847800 NCBI chrNW_004955431:10,379,061...11,017,884
Ensembl chrNW_004955431:10,378,993...11,018,618 		JBrowse link
G Neto2 neuropilin and tolloid like 2 involved_in ISO PMID:28717010 SynGO PMID:28717010 RGD:155230759 NCBI chrNW_004955474:8,035,874...8,106,397
Ensembl chrNW_004955474:8,035,874...8,106,397 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:28143929) SynGO PMID:28143929 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Olfm1 olfactomedin 1 involved_in ISO PMID:30067977 SynGO PMID:30067977 RGD:405650285 NCBI chrNW_004955733:6,189...30,455
Ensembl chrNW_004955733:6,189...30,455 		JBrowse link
G Prkcz protein kinase C zeta involved_in ISO PMID:18667614 SynGO PMID:18667614 RGD:13702194 NCBI chrNW_004955486:8,947,579...9,021,702
Ensembl chrNW_004955486:8,947,579...9,021,702 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in ISO (PMID:12202034) SynGO PMID:12202034 NCBI chrNW_004955435:15,090,521...15,171,397
Ensembl chrNW_004955435:15,150,827...15,171,397 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in ISO PMID:19734897 SynGO PMID:19734897 RGD:2314692 NCBI chrNW_004955449:2,172,354...2,453,367
Ensembl chrNW_004955449:2,171,924...2,462,451 		JBrowse link
G Tmem108 transmembrane protein 108 involved_in ISO (PMID:28096412) SynGO PMID:28096412 NCBI chrNW_004955501:5,148,821...5,475,073
Ensembl chrNW_004955501:5,147,375...5,468,417 		JBrowse link
G Tnik TRAF2 and NCK interacting kinase involved_in ISO (PMID:23035106) SynGO PMID:23035106 NCBI chrNW_004955420:1,166,340...1,542,712
Ensembl chrNW_004955420:1,166,340...1,542,326 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:28973854) SynGO PMID:28973854 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100 		JBrowse link
G Vps26b VPS26, retromer complex component B involved_in ISO (PMID:34965419) SynGO PMID:34965419 NCBI chrNW_004955412:35,035,730...35,061,441
Ensembl chrNW_004955412:35,035,208...35,061,441 		JBrowse link
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap44 Rho GTPase activating protein 44 involved_in ISO (PMID:23739967) SynGO PMID:23739967 NCBI chrNW_004955467:4,428,738...4,590,877
Ensembl chrNW_004955467:4,430,087...4,522,611 		JBrowse link
G Gripap1 GRIP1 associated protein 1 involved_in ISO PMID:20098723
(PMID:28285821)		 SynGO PMID:20098723 PMID:28285821 RGD:12050105 NCBI chrNW_004955543:500,340...527,243
Ensembl chrNW_004955543:500,340...527,267 		JBrowse link
regulation of protein localization to adherens junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcl vinculin involved_in ISO (PMID:26923917) ARUK-UCL PMID:26923917 NCBI chrNW_004955437:17,812,998...17,920,253
Ensembl chrNW_004955437:17,813,007...17,920,253 		JBrowse link
regulation of protein localization to cell-cell junction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc7 zDHHC palmitoyltransferase 7 involved_in ISO (PMID:27380321) UniProt PMID:27380321 NCBI chrNW_004955541:398,364...426,330
Ensembl chrNW_004955541:397,748...432,501 		JBrowse link
regulation of protein localization to synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (PMID:27307232) UniProt PMID:27307232 NCBI chrNW_004955434:1,262,956...1,302,877
Ensembl chrNW_004955434:1,262,264...1,302,496 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO (PMID:23676497) UniProt PMID:23676497 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12619
    localization 4344
      macromolecule localization 2418
        cellular macromolecule localization 2124
          protein localization 2111
            protein localization to cell junction 144
              protein localization to cell-cell junction + 27
              protein localization to synapse + 109
paths to the root