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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of organelle assembly
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Accession:GO:1902115 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of organelle assembly.


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regulation of organelle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000064130 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr16:84,416,051...84,416,380 JBrowse link
G ENSRNOG00000069339 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr16:84,417,242...84,417,604 JBrowse link
G Ezr ezrin involved_in ISO
IBA
IEA		 UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:21148287 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Msn moesin involved_in ISO
IBA
IEA		 UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:21148287 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Rdx radixin involved_in ISO
IBA		 UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287)
GO_REF:0000033		 RGD
GO_Central		 PMID:21148287 GO_REF:0000033 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:44,684,129...44,698,568
Ensembl chr 8:44,684,127...44,698,568 		JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (PMID:27994061) RGD PMID:27994061 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547 		JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS		 (PMID:25495476)
GO_REF:0000024		 RGD
GO_Central		 PMID:25495476 GO_REF:0000024 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683 		JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25495476)		 GO_Central
Ensembl
RGD		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626 		JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23916833) RGD PMID:23916833 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000118
MGI:2450997 (PMID:23695157)
GO_REF:0000033		 TreeGrafter
RGD
GO_Central		 PMID:23695157 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO		 GO_REF:0000024
(PMID:20181828)		 UniProt
RGD		 PMID:20181828 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
IEA
ISS		 (PMID:25484098)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
Ensembl		 PMID:25484098 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr10:54,718,663...54,722,784
Ensembl chr10:54,717,724...54,722,782 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635 		JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS		 (PMID:31806350)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:31806350 GO_REF:0000024 GO_REF:0000033 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964 		JBrowse link
negative regulation of cardiac myofibril assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad4 SMAD family member 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3689643|PMID:16151019)		 Ensembl
RGD		 PMID:16151019 GO_REF:0000107 MGI:3689643 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
negative regulation of centriole replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(MGI:4830038|PMID:20627074)
GO_REF:0000107		 UniProt
GO_Central
TreeGrafter
RGD
Ensembl		 PMID:20627074 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:4830038 NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:27796307) RGD PMID:27796307 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:27796307) RGD PMID:27796307 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064 		JBrowse link
G Mdm1 Mdm1 nuclear protein involved_in IEA
ISS
ISO		 GO_REF:0000002
GO_REF:0000024
(PMID:26337392)		 InterPro
UniProt
RGD		 PMID:26337392 GO_REF:0000002 GO_REF:0000024 NCBI chr 7:53,729,603...53,766,034
Ensembl chr 7:53,729,610...53,766,034 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in ISO (PMID:25385835) RGD PMID:25385835 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665 		JBrowse link
G Trim37 tripartite motif-containing 37 involved_in ISO
IBA		 (PMID:23769972)
GO_REF:0000033		 RGD
GO_Central		 PMID:23769972 GO_REF:0000033 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558 		JBrowse link
negative regulation of cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
ISS
IEA		 (PMID:31204173)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:31204173 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Ccp110 centriolar coiled-coil protein 110 involved_in ISO (MGI:5780541|PMID:17719545)
(PMID:17719545), (PMID:30375385)		 RGD PMID:17719545 PMID:30375385 MGI:5780541 NCBI chr 1:173,042,238...173,072,873
Ensembl chr 1:173,042,310...173,072,873 		JBrowse link
G Cdk10 cyclin-dependent kinase 10 involved_in ISO
IEA
ISS		 (PMID:27104747)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27104747 GO_REF:0000024 GO_REF:0000107 NCBI chr19:51,260,012...51,273,009
Ensembl chr19:51,261,356...51,269,078 		JBrowse link
G Cep97 centrosomal protein 97 involved_in ISO
IBA		 (MGI:5780541|PMID:17719545)
GO_REF:0000033
(PMID:17719545), (PMID:30375385)		 RGD
GO_Central		 PMID:17719545 PMID:30375385 GO_REF:0000033 MGI:5780541 NCBI chr11:44,683,503...44,711,471
Ensembl chr11:44,683,506...44,711,471 		JBrowse link
G Evi5l ecotropic viral integration site 5-like involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr12:2,519,648...2,558,766
Ensembl chr12:2,519,671...2,559,950 		JBrowse link
G Gdi2 GDP dissociation inhibitor 2 involved_in ISO
ISS		 (PMID:25860027)
GO_REF:0000024		 RGD
UniProt		 PMID:25860027 GO_REF:0000024 NCBI chr17:66,649,616...66,676,299
Ensembl chr17:66,649,619...66,676,366 		JBrowse link
G Kif24 kinesin family member 24 involved_in ISO (PMID:30375385) RGD PMID:30375385 NCBI chr 5:56,561,019...56,628,040
Ensembl chr 5:56,561,154...56,628,025 		JBrowse link
G Limk2 LIM domain kinase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25849865)		 UniProt
Ensembl
RGD		 PMID:25849865 GO_REF:0000024 GO_REF:0000107 NCBI chr14:78,208,182...78,286,106
Ensembl chr14:78,218,063...78,286,007 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in ISO
ISS		 (PMID:31204173)
GO_REF:0000024		 RGD
UniProt		 PMID:31204173 GO_REF:0000024 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25552655)		 Ensembl
RGD		 PMID:25552655 GO_REF:0000107 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168 		JBrowse link
G Mphosph9 M-phase phosphoprotein 9 involved_in ISO (PMID:30375385)
(MGI:6267991|PMID:30375385)		 RGD PMID:30375385 MGI:6267991 NCBI chr12:32,275,449...32,346,097
Ensembl chr12:32,275,558...32,342,392 		JBrowse link
G Odf2l outer dense fiber of sperm tails 2-like involved_in ISO
IBA		 (PMID:28775150)
GO_REF:0000033
(MGI:6162363|PMID:28775150)		 RGD
GO_Central		 PMID:28775150 GO_REF:0000033 MGI:6162363 NCBI chr 2:234,036,049...234,072,751
Ensembl chr 2:234,033,652...234,072,747 		JBrowse link
G Tbc1d30 TBC1 domain family, member 30 involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 7:56,779,570...56,869,092
Ensembl chr 7:56,782,165...56,870,515 		JBrowse link
G Tbc1d7 TBC1 domain family, member 7 involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr17:21,530,709...21,548,556
Ensembl chr17:21,531,016...21,548,553 		JBrowse link
G Tchp trichoplein, keratin filament binding involved_in ISO (PMID:25270598) RGD PMID:25270598 NCBI chr12:41,877,888...41,893,264
Ensembl chr12:41,877,889...41,892,427 		JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25849865)		 UniProt
RGD		 PMID:25849865 GO_REF:0000024 NCBI chr 5:57,691,922...57,697,698
Ensembl chr 5:57,691,969...57,697,698 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:28498859) RGD PMID:28498859 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018 		JBrowse link
G Wdr44 WD repeat domain 44 involved_in ISO
IEA
ISS		 (PMID:31204173)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:31204173 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:114,481,890...114,587,307
Ensembl chr  X:114,482,006...114,587,224 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA
ISS		 (PMID:25849865)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25849865 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
negative regulation of cytoplasmic mRNA processing body assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nbdy negative regulator of P-body association involved_in ISO (PMID:27918561) RGD PMID:27918561
G Patl2 PAT1 homolog 2 acts_upstream_of_or_within ISO (PMID:20826699) RGD PMID:20826699 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253 		JBrowse link
negative regulation of non-motile cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm2 dynamin 2 IMP RGD PMID:23994472 RGD:9685166 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157 		JBrowse link
G Mak male germ cell-associated kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179972 (PMID:21148103)		 Ensembl
RGD		 PMID:21148103 GO_REF:0000107 NCBI chr17:23,683,753...23,731,125
Ensembl chr17:23,693,878...23,730,001 		JBrowse link
G Map4 microtubule-associated protein 4 involved_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 8:109,925,233...110,064,370
Ensembl chr 8:109,925,575...110,064,362 		JBrowse link
negative regulation of podosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 acts_upstream_of_or_within ISO (PMID:21352810) RGD PMID:21352810 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355 		JBrowse link
negative regulation of sarcomere organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO (PMID:12847114) RGD PMID:12847114 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:24777478 RGD:13204833 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
negative regulation of stress granule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styxl1 serine/threonine/tyrosine interacting-like 1 involved_in ISO
IBA		 (PMID:20180778), (PMID:23163895)
GO_REF:0000033		 RGD
GO_Central		 PMID:20180778 PMID:23163895 GO_REF:0000033 NCBI chr12:20,907,410...20,940,232
Ensembl chr12:20,907,435...20,939,752 		JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISO
IEA
ISS		 (PMID:27022092), (PMID:32302570)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27022092 PMID:32302570 GO_REF:0000024 GO_REF:0000107 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897 		JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in ISO (PMID:30952800), (PMID:31271352) RGD PMID:30952800 PMID:31271352 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242 		JBrowse link
G Becn1 beclin 1 IMP RGD PMID:25561470 RGD:11561937 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) RGD PMID:21072319 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:25484098) RGD PMID:25484098 NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154 		JBrowse link
G Moap1 modulator of apoptosis 1 involved_in ISO (PMID:33783314)
(MGI:6810697|PMID:33783314)		 RGD PMID:33783314 MGI:6810697 NCBI chr 6:121,882,565...121,884,500
Ensembl chr 6:121,882,366...121,898,643 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO
IEA		 (PMID:25578879)
GO_REF:0000107		 RGD
Ensembl		 PMID:25578879 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO
IEA		 (PMID:25578879)
GO_REF:0000107		 RGD
Ensembl		 PMID:25578879 GO_REF:0000107 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO
IEA		 (PMID:25578879)
GO_REF:0000107		 RGD
Ensembl		 PMID:25578879 GO_REF:0000107 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
ISS
IEA		 (PMID:25495476)
GO_REF:0000024
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169 		JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:25495476)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478 		JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO
IEA		 (PMID:24056301)
GO_REF:0000107		 RGD
Ensembl		 PMID:24056301 GO_REF:0000107 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202 		JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO
IEA		 (PMID:21068542)
(MGI:5634888|PMID:21068542)
GO_REF:0000107		 RGD
Ensembl		 PMID:21068542 GO_REF:0000107 MGI:5634888 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784 		JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:29437695) RGD PMID:29437695 NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:45,232,325...45,258,345 		JBrowse link
G Snx30 sorting nexin family member 30 involved_in ISO (PMID:32513819) RGD PMID:32513819 NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631 		JBrowse link
G Snx4 sorting nexin 4 involved_in ISO
IBA		 (PMID:32513819), (PMID:33468622)
GO_REF:0000033		 RGD
GO_Central		 PMID:32513819 PMID:33468622 GO_REF:0000033 NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174 		JBrowse link
G Snx7 sorting nexin 7 involved_in ISO (PMID:32513819) RGD PMID:32513819 NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763 		JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:37943659) RGD PMID:37943659 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 IMP RGD PMID:23448468 RGD:13208863 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966 		JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO
ISS
IEA		 (PMID:31271352)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:31271352 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,776,280...14,782,202
Ensembl chr  X:14,776,293...14,782,202 		JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:31271352) RGD PMID:31271352 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846 		JBrowse link
positive regulation of centriole elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpj centromere protein J involved_in ISO (PMID:27185865) RGD PMID:27185865 NCBI chr15:30,627,206...30,690,384
Ensembl chr15:30,627,224...30,686,791 		JBrowse link
G Cep120 centrosomal protein 120 involved_in ISO
IBA		 (PMID:27185865)
GO_REF:0000033		 RGD
GO_Central		 PMID:27185865 GO_REF:0000033 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964 		JBrowse link
G Cep295 centrosomal protein 295 involved_in ISO
IEA
ISS		 (PMID:27185865)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27185865 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:12,156,568...12,194,542
Ensembl chr 8:12,156,554...12,194,552 		JBrowse link
G Ppp1r35 protein phosphatase 1, regulatory subunit 35 involved_in ISO (PMID:30168418) RGD PMID:30168418 NCBI chr12:18,915,909...18,919,253 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
positive regulation of centriole replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpj centromere protein J involved_in ISO (PMID:22020124) RGD PMID:22020124 NCBI chr15:30,627,206...30,690,384
Ensembl chr15:30,627,224...30,686,791 		JBrowse link
G Nup62 nucleoporin 62 involved_in ISO (PMID:24107630) RGD PMID:24107630 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Plk4 polo-like kinase 4 involved_in
acts_upstream_of_or_within		 ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22349705)
(PMID:16244668), (PMID:17681131), (PMID:27796307)		 UniProt
Ensembl
RGD		 PMID:16244668 PMID:17681131 PMID:22349705 PMID:27796307 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:123,802,527...123,820,942
Ensembl chr 2:123,802,512...123,820,942 		JBrowse link
G Sass6 SAS-6 centriolar assembly protein involved_in ISO (PMID:22020124) RGD PMID:22020124 NCBI chr 2:204,546,660...204,578,930
Ensembl chr 2:204,546,660...204,578,927 		JBrowse link
G Stil STIL, centriolar assembly protein involved_in ISO (PMID:22020124) RGD PMID:22020124 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
positive regulation of cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07064502.1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 6:79,331,286...79,332,998 JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5776638|PMID:26859289)		 UniProt
RGD		 PMID:26859289 GO_REF:0000024 MGI:5776638 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:15173597) RGD PMID:15173597 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Ccdc88a coiled coil domain containing 88A involved_in ISO (PMID:27623382) RGD PMID:27623382 NCBI chr14:103,104,091...103,256,112
Ensembl chr14:103,103,513...103,252,368 		JBrowse link
G Ccp110 centriolar coiled-coil protein 110 involved_in ISO (MGI:5780349|PMID:26965371) RGD PMID:26965371 MGI:5780349 NCBI chr 1:173,042,238...173,072,873
Ensembl chr 1:173,042,310...173,072,873 		JBrowse link
G Cep120 centrosomal protein 120 involved_in ISO (MGI:5635753|PMID:25251415) RGD PMID:25251415 MGI:5635753 NCBI chr18:47,127,979...47,189,964
Ensembl chr18:47,127,981...47,189,964 		JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin involved_in ISO (PMID:27623382) RGD PMID:27623382 NCBI chr 5:153,320,962...153,363,734
Ensembl chr 5:153,320,962...153,363,578 		JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5644575|PMID:25860027)
(PMID:27979967)		 RGD PMID:25860027 PMID:27979967 MGI:5644575 NCBI chr15:95,956,329...96,009,994
Ensembl chr15:95,956,398...96,010,066 		JBrowse link
G ENSRNOG00000067360 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr 6:79,332,021...79,332,371 JBrowse link
G Entr1 endosome associated trafficking regulator 1 involved_in ISO
IBA		 (PMID:27767179)
GO_REF:0000033		 RGD
GO_Central		 PMID:27767179 GO_REF:0000033 NCBI chr 3:9,200,967...9,207,688
Ensembl chr 3:9,200,967...9,207,688 		JBrowse link
G Entr1l2 endosome associated trafficking regulator 1 like 2 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr16:16,018,137...16,020,197
Ensembl chr16:16,018,228...16,019,934 		JBrowse link
G Entr1l3 endosome associated trafficking regulator 1 like 3 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr  X:6,381,218...6,383,349
Ensembl chr 3:9,200,967...9,207,688
Ensembl chr  X:9,200,967...9,207,688 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISS
ISO		 GO_REF:0000024
(MGI:5296432|PMID:21935430)
(PMID:21840926)		 UniProt
RGD		 PMID:21840926 PMID:21935430 GO_REF:0000024 MGI:5296432 NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
ISS		 (MGI:5644575|PMID:25860027)
GO_REF:0000024		 RGD
UniProt		 PMID:25860027 GO_REF:0000024 MGI:5644575 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Htt huntingtin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21985783)		 Ensembl
RGD		 PMID:21985783 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Ift20 intraflagellar transport 20 involved_in ISO (PMID:17604723) RGD PMID:17604723 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift88 intraflagellar transport 88 involved_in ISO (PMID:17604723) RGD PMID:17604723 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 involved_in ISO
IBA		 (PMID:25270598)
GO_REF:0000033		 RGD
GO_Central		 PMID:25270598 GO_REF:0000033 NCBI chr 7:109,979,060...110,009,091
Ensembl chr 7:109,979,060...110,008,927 		JBrowse link
G Mark4 microtubule affinity regulating kinase 4 involved_in ISO (PMID:23400999) RGD PMID:23400999 NCBI chr 1:79,075,353...79,108,882
Ensembl chr 1:79,068,904...79,108,556 		JBrowse link
G Mns1 meiosis-specific nuclear structural 1 involved_in ISO (MGI:5318625|PMID:22396656) RGD PMID:22396656 MGI:5318625 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925 		JBrowse link
G Ppp1r35 protein phosphatase 1, regulatory subunit 35 involved_in ISO (MGI:6442352|PMID:32628936) RGD PMID:32628936 MGI:6442352 NCBI chr12:18,915,909...18,919,253 JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:25673879), (PMID:26258637), (PMID:31204173) RGD PMID:25673879 PMID:26258637 PMID:31204173 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Rab3ip RAB3A interacting protein involved_in ISO (PMID:17574030) RGD PMID:17574030 NCBI chr 7:52,531,461...52,575,295
Ensembl chr 7:52,532,401...52,561,043 		JBrowse link
G Saxo1 stabilizer of axonemal microtubules 1 involved_in ISO (PMID:25673876) RGD PMID:25673876 NCBI chr 5:100,937,134...101,093,308
Ensembl chr 5:100,937,130...101,093,281 		JBrowse link
G Saxol1 stabilizer of axonemal microtubules like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:27,973,442...27,975,599 JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 involved_in ISO
IBA		 (PMID:26365339)
GO_REF:0000033		 RGD
GO_Central		 PMID:26365339 GO_REF:0000033 NCBI chr14:66,873,467...66,919,737
Ensembl chr14:66,873,459...66,919,741 		JBrowse link
positive regulation of cytoplasmic mRNA processing body assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:21976065) RGD PMID:21976065 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO (PMID:21299754) RGD PMID:21299754 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575 		JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA		 (PMID:21233283)
GO_REF:0000107		 RGD
Ensembl		 PMID:21233283 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025 		JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like involved_in ISO (PMID:21233283) RGD PMID:21233283 NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203 		JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744 		JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (PMID:18625844) RGD PMID:18625844 NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204 		JBrowse link
positive regulation of extracellular exosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:22660413) RGD PMID:22660413 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Sdc1 syndecan 1 involved_in ISO (PMID:22660413) RGD PMID:22660413 NCBI chr 6:31,562,799...31,585,267
Ensembl chr 6:31,562,739...31,585,264 		JBrowse link
G Sdc4 syndecan 4 involved_in ISO (PMID:22660413) RGD PMID:22660413 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580 		JBrowse link
G Sdcbp syndecan binding protein involved_in ISO (PMID:22660413) RGD PMID:22660413 NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572 		JBrowse link
positive regulation of motile cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177755|MGI:2386570 (PMID:21985783) RGD PMID:21985783 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Zmynd10 zinc finger, MYND-type containing 10 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6154799|PMID:29601588)		 UniProt
RGD		 PMID:29601588 GO_REF:0000024 MGI:6154799 NCBI chr 8:108,220,386...108,224,745
Ensembl chr 8:108,220,386...108,224,744 		JBrowse link
positive regulation of non-motile cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atmin ATM interactor acts_upstream_of_or_within ISO MGI:1861457|MGI:2682328 (PMID:25294941) RGD PMID:25294941 NCBI chr19:44,996,506...45,013,606
Ensembl chr19:44,996,356...45,013,605 		JBrowse link
G Cenpj centromere protein J acts_upstream_of_or_within ISO (PMID:23213448) RGD PMID:23213448 NCBI chr15:30,627,206...30,690,384
Ensembl chr15:30,627,224...30,686,791 		JBrowse link
G Cep135 centrosomal protein 135 involved_in ISO (PMID:26545777) RGD PMID:26545777 NCBI chr14:31,530,538...31,595,812
Ensembl chr14:31,531,482...31,595,772 		JBrowse link
G Dynll1 dynein light chain LC8-type 1 acts_upstream_of_or_within ISO MGI:2682328|MGI:4368846 (PMID:25294941) RGD PMID:25294941 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
(PMID:21985783)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21985783 GO_REF:0000024 GO_REF:0000107 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (PMID:21985783) RGD PMID:21985783 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 IMP RGD PMID:23994472 RGD:9685166 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087 		JBrowse link
G Rp1 RP1, axonemal microtubule associated acts_upstream_of_or_within ISO MGI:96913 (PMID:21148103) RGD PMID:21148103 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Septin7 septin 7 involved_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243 		JBrowse link
G Septin9 septin 9 involved_in ISO
IEA		 (PMID:23572511)
GO_REF:0000107		 RGD
Ensembl		 PMID:23572511 GO_REF:0000107 NCBI chr10:102,409,798...102,579,056
Ensembl chr10:102,409,711...102,579,055 		JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:21614130 RGD:11535947 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334 		JBrowse link
G Ttbk2 tau tubulin kinase 2 acts_upstream_of_or_within ISO MGI:5496675 (PMID:23141541) RGD PMID:23141541 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223 		JBrowse link
G Wrap73 WD repeat containing, antisense to TP73 involved_in ISO (PMID:26545777) RGD PMID:26545777 NCBI chr 5:164,706,112...164,721,645
Ensembl chr 5:164,706,163...164,721,643 		JBrowse link
positive regulation of organelle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stx18 syntaxin 18 involved_in ISO
IEA		 (PMID:19401338)
GO_REF:0000107		 RGD
Ensembl		 PMID:19401338 GO_REF:0000107 NCBI chr14:72,670,683...72,761,423
Ensembl chr14:72,670,411...72,761,464 		JBrowse link
positive regulation of podosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef5 Rho guanine nucleotide exchange factor 5 acts_upstream_of_or_within ISO MGI:1096342|MGI:98397 (PMID:21525037) RGD PMID:21525037 NCBI chr 4:72,087,205...72,112,316
Ensembl chr 4:72,087,247...72,111,254 		JBrowse link
G Arpc2 actin related protein 2/3 complex, subunit 2 IMP RGD PMID:17224451 RGD:2306207 NCBI chr 9:75,820,782...75,851,471
Ensembl chr 9:75,820,770...75,851,471 		JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr 4:104,594,743...104,611,856
Ensembl chr 4:104,594,753...104,611,856 		JBrowse link
G Csf2 colony stimulating factor 2 involved_in ISO (PMID:15220135) RGD PMID:15220135 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:20137952)		 UniProt
Ensembl
RGD		 PMID:20137952 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211 		JBrowse link
G Il5 interleukin 5 involved_in ISO (PMID:15220135) RGD PMID:15220135 NCBI chr10:37,874,342...37,877,213
Ensembl chr10:37,874,342...37,877,213 		JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO (PMID:24236012) RGD PMID:24236012 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:24127566) RGD PMID:24127566 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24127566)		 Ensembl
RGD		 PMID:24127566 GO_REF:0000107 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178 		JBrowse link
G Msn moesin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24127566)		 Ensembl
RGD		 PMID:24127566 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628 		JBrowse link
G Palld palladin, cytoskeletal associated protein IMP RGD PMID:16868024 RGD:2325783 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337 		JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO MGI:1858952|MGI:98397 (PMID:21525037) RGD PMID:21525037 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1096342|MGI:1858952 (PMID:21525037), (PMID:24127566) RGD PMID:21525037 PMID:24127566 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:15220135) RGD PMID:15220135 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
positive regulation of spindle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 involved_in ISO
ISS
IEA		 (PMID:27462074)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:27462074 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:129,615,208...129,680,888
Ensembl chr 6:129,609,397...129,680,883 		JBrowse link
G Gpsm2 G-protein signaling modulator 2 involved_in ISO (PMID:11781568) RGD PMID:11781568 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6154463|PMID:23351492)		 Ensembl
RGD		 PMID:23351492 GO_REF:0000107 MGI:6154463 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 involved_in ISO (PMID:27462074) RGD PMID:27462074 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855 		JBrowse link
G Spag5 sperm associated antigen 5 involved_in ISO (PMID:27462074) RGD PMID:27462074 NCBI chr10:63,198,717...63,216,746
Ensembl chr10:63,198,768...63,216,745 		JBrowse link
positive regulation of stress granule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 IMP RGD PMID:30404558 RGD:401900732 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Becn1 beclin 1 IMP RGD PMID:30404558 RGD:401900732 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Caprin1 cell cycle associated protein 1 involved_in ISO
IEA
ISS		 (PMID:27022092), (PMID:32302570), (PMID:32302571), (PMID:32302572), (PMID:36279435)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27022092 PMID:32302570 PMID:32302571 PMID:32302572 PMID:36279435 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502 		JBrowse link
G G3bp1 G3BP stress granule assembly factor 1 involved_in ISO (PMID:23279204) RGD PMID:23279204 NCBI chr10:39,586,864...39,620,268
Ensembl chr10:39,586,864...39,620,268 		JBrowse link
G G3bp2 G3BP stress granule assembly factor 2 involved_in ISO (PMID:23279204) RGD PMID:23279204 NCBI chr14:15,932,403...16,020,555
Ensembl chr14:15,987,417...16,020,548 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IMP RGD PMID:30404558 RGD:401900732 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:30404558 RGD:401900732 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Ubap2l ubiquitin associated protein 2-like involved_in ISO (PMID:32302570) RGD PMID:32302570 NCBI chr 2:175,438,703...175,494,085
Ensembl chr 2:175,438,703...175,493,998 		JBrowse link
regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:37943659) RGD PMID:37943659 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286 		JBrowse link
G Efnb1 ephrin B1 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 GO_REF:0000107
(PMID:33280498)		 Ensembl
RGD		 PMID:33280498 GO_REF:0000107 NCBI chr  X:64,257,351...64,270,158
Ensembl chr  X:64,257,351...64,270,157 		JBrowse link
G Ephb2 Eph receptor B2 acts_upstream_of_positive_effect ISO (PMID:33280498) RGD PMID:33280498 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Ift20 intraflagellar transport 20 involved_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift88 intraflagellar transport 88 involved_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Mtmr3 myotubularin related protein 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25578879)		 Ensembl
RGD		 PMID:25578879 GO_REF:0000107 NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA		 (PMID:23524951)
GO_REF:0000107		 RGD
Ensembl		 PMID:23524951 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868 		JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in ISO (PMID:20545908) RGD PMID:20545908 NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
Ensembl chr  X:202,405,759...202,413,868 		JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
IEA
ISS		 (PMID:27334615)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:27334615 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408 		JBrowse link
G Rnf186 ring finger protein 186 acts_upstream_of_positive_effect ISO (PMID:33280498) RGD PMID:33280498 NCBI chr 5:151,210,492...151,211,716
Ensembl chr 5:151,210,492...151,211,716 		JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (PMID:23093945) RGD PMID:23093945 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985 		JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in ISO
IBA
IEA		 (PMID:22613832)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:22613832 GO_REF:0000033 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:20529957) RGD PMID:20529957 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505 		JBrowse link
regulation of centriole replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alms1 ALMS1, centrosome and basal body associated protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:118,125,581...118,226,005
Ensembl chr 4:118,125,607...118,226,005 		JBrowse link
G C1h10orf90 similar to human chromosome 10 open reading frame 90 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:189,059,744...189,293,353
Ensembl chr 1:189,059,746...189,293,435 		JBrowse link
G Cenpj centromere protein J involved_in ISO (PMID:20531387) RGD PMID:20531387 NCBI chr15:30,627,206...30,690,384
Ensembl chr15:30,627,224...30,686,791 		JBrowse link
G Cep295 centrosomal protein 295 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:12,156,568...12,194,542
Ensembl chr 8:12,156,554...12,194,552 		JBrowse link
G Cep295nl CEP295 N-terminal like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,562,190...103,581,183
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
G Cep76 centrosomal protein 76 involved_in ISO
IBA		 (PMID:19460342)
GO_REF:0000033		 RGD
GO_Central		 PMID:19460342 GO_REF:0000033 NCBI chr18:61,174,514...61,208,512
Ensembl chr18:61,178,310...61,208,504 		JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO
ISS		 (PMID:20352051)
GO_REF:0000024		 RGD
UniProt		 PMID:20352051 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645 		JBrowse link
G Plk2 polo-like kinase 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15242618), (PMID:19001868), (PMID:20352051), (PMID:20531387)		 UniProt
Ensembl
RGD		 PMID:15242618 PMID:19001868 PMID:20352051 PMID:20531387 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947 		JBrowse link
G Spice1 spindle and centriole associated protein 1 involved_in ISS
IBA
IEA		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118		 UniProt
GO_Central
TreeGrafter		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr11:56,289,291...56,332,382
Ensembl chr11:56,290,540...56,332,447 		JBrowse link
G Stil STIL, centriolar assembly protein involved_in ISO (PMID:22020124) RGD PMID:22020124 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611 		JBrowse link
regulation of cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 IMP RGD PMID:23185005 RGD:9685162 NCBI chr 1:32,430,436...32,562,481
Ensembl chr 1:32,430,436...32,560,494 		JBrowse link
G Arf4 ADP-ribosylation factor 4 involved_in ISO
IEA
ISS		 (PMID:25673879), (PMID:26258637)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25673879 PMID:26258637 GO_REF:0000024 GO_REF:0000107 NCBI chr16:1,896,692...1,913,267
Ensembl chr16:1,896,546...1,913,261 		JBrowse link
G Atg3 autophagy related 3 involved_in ISO
IEA		 (MGI:5527013|PMID:24089205)
GO_REF:0000107		 RGD
Ensembl		 PMID:24089205 GO_REF:0000107 MGI:5527013 NCBI chr11:55,624,914...55,653,249
Ensembl chr11:55,624,917...55,653,224 		JBrowse link
G Atg5 autophagy related 5 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5527012|PMID:24089209), (MGI:5527013|PMID:24089205)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24089205 PMID:24089209 GO_REF:0000024 GO_REF:0000107 MGI:5527012 MGI:5527013 NCBI chr20:47,798,217...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Cdkl1 cyclin dependent kinase like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:88,224,154...88,273,434
Ensembl chr 6:88,224,143...88,270,276 		JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 involved_in ISO (PMID:29420175) RGD PMID:29420175 NCBI chr  X:33,757,605...33,988,075
Ensembl chr  X:33,821,257...33,986,582 		JBrowse link
G Cntrob centrobin, centriole duplication and spindle assembly protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:54,022,523...54,047,793
Ensembl chr10:54,022,852...54,044,849 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in ISS
ISO		 GO_REF:0000024
(MGI:5607344|PMID:25134987)		 UniProt
RGD		 PMID:25134987 GO_REF:0000024 MGI:5607344 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Dcdc2 doublecortin domain containing 2 involved_in ISO
IBA
IEA
ISS		 (PMID:25601850)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000024		 RGD
GO_Central
TreeGrafter
UniProt		 PMID:25601850 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr17:39,845,952...40,031,781
Ensembl chr17:39,845,952...40,030,743 		JBrowse link
G Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:26077881)		 UniProt
Ensembl
RGD		 PMID:26077881 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:9,992,537...10,025,355
Ensembl chr 6:9,992,541...10,025,336 		JBrowse link
G Dynlt2b dynein light chain Tctex-type 2B involved_in ISO (PMID:25205765) RGD PMID:25205765 NCBI chr11:68,359,138...68,367,573
Ensembl chr11:68,358,263...68,367,499 		JBrowse link
G Evi5 ecotropic viral integration site 5 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr14:1,875,601...2,021,678
Ensembl chr14:1,875,647...2,021,678 		JBrowse link
G Ift140 intraflagellar transport 140 involved_in ISO (PMID:22503633) RGD PMID:22503633 NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433 		JBrowse link
G Ift20 intraflagellar transport 20 involved_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124 		JBrowse link
G Ift88 intraflagellar transport 88 involved_in ISO (MGI:5527012|PMID:24089209) RGD PMID:24089209 MGI:5527012 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5641772|PMID:25823377)
GO_REF:0000107
(PMID:29021280)		 UniProt
RGD
Ensembl		 PMID:25823377 PMID:29021280 GO_REF:0000024 GO_REF:0000107 MGI:5641772 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645 		JBrowse link
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein involved_in ISO
IEA
ISS		 (PMID:25048963)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:25048963 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:44,636,820...44,644,551
Ensembl chr 2:44,636,856...44,642,601 		JBrowse link
G Noto notochord homeobox acts_upstream_of_or_within ISO MGI:3053092 (PMID:17884984) RGD PMID:17884984 NCBI chr 4:117,961,163...117,965,402
Ensembl chr 4:117,961,163...117,965,402 		JBrowse link
G Odad3 outer dynein arm docking complex subunit 3 involved_in ISO (MGI:5607398|PMID:24067530) RGD PMID:24067530 MGI:5607398 NCBI chr 8:20,520,898...20,534,499
Ensembl chr 8:20,520,898...20,534,499 		JBrowse link
G Odf2 outer dense fiber of sperm tails 2 involved_in ISO
IBA
IEA		 (PMID:17646400)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:17646400 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:13,160,981...13,207,223
Ensembl chr 3:13,161,494...13,206,985 		JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO
ISS		 (PMID:31204173)
GO_REF:0000024		 RGD
UniProt		 PMID:31204173 GO_REF:0000024 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525 		JBrowse link
G Rab11fip3 RAB11 family interacting protein 3 involved_in ISO (PMID:26258637), (PMID:31204173) RGD PMID:26258637 PMID:31204173 NCBI chr10:15,002,650...15,086,382
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Rabep2 rabaptin, RAB GTPase binding effector protein 2 involved_in ISO
IEA		 (PMID:27224062)
GO_REF:0000107		 RGD
Ensembl		 PMID:27224062 GO_REF:0000107 NCBI chr 1:181,010,305...181,026,651
Ensembl chr 1:181,010,305...181,026,648 		JBrowse link
G Rabgap1 RAB GTPase activating protein 1 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 3:21,208,012...21,326,013
Ensembl chr 3:21,208,055...21,326,013 		JBrowse link
G Rabgap1l RAB GTPase activating protein 1-like NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr13:72,464,114...73,059,845
Ensembl chr13:72,468,110...73,059,984 		JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 involved_in ISO (PMID:27224062)
(MGI:6094755|PMID:27224062)		 RGD PMID:27224062 MGI:6094755 NCBI chr13:88,754,521...88,979,363
Ensembl chr13:88,754,626...89,097,111 		JBrowse link
G Sgsm3 small G protein signaling modulator 3 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 7:112,514,453...112,544,109
Ensembl chr 7:112,514,630...112,544,108 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 involved_in ISO (MGI:4361957|PMID:19596800) RGD PMID:19596800 MGI:4361957 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 involved_in ISO (MGI:4361957|PMID:19596800) RGD PMID:19596800 MGI:4361957 NCBI chr 6:94,537,088...94,848,085
Ensembl chr 6:94,537,088...94,848,064 		JBrowse link
G Tbc1d1 TBC1 domain family member 1 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr14:43,936,820...44,135,133
Ensembl chr14:43,935,636...44,136,499 		JBrowse link
G Tbc1d10a TBC1 domain family, member 10a NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr14:79,051,822...79,083,603
Ensembl chr14:79,055,432...79,083,600 		JBrowse link
G Tbc1d10b TBC1 domain family, member 10b NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 1:181,814,972...181,826,628
Ensembl chr 1:181,814,972...181,826,628 		JBrowse link
G Tbc1d10c TBC1 domain family, member 10C NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 1:201,476,258...201,484,876
Ensembl chr 1:201,477,157...201,564,920 		JBrowse link
G Tbc1d13 TBC1 domain family, member 13 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 3:13,408,944...13,425,524
Ensembl chr 3:13,408,920...13,425,517 		JBrowse link
G Tbc1d14 TBC1 domain family, member 14 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183 		JBrowse link
G Tbc1d15 TBC1 domain family, member 15 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 7:50,804,553...50,860,272
Ensembl chr 7:50,804,012...50,860,175 		JBrowse link
G Tbc1d16 TBC1 domain family, member 16 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr10:104,400,963...104,486,698
Ensembl chr10:104,402,398...104,486,670 		JBrowse link
G Tbc1d17 TBC1 domain family, member 17 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 1:95,324,770...95,333,156
Ensembl chr 1:95,322,737...95,333,005 		JBrowse link
G Tbc1d19 TBC1 domain family, member 19 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr14:57,084,305...57,200,221
Ensembl chr14:57,084,311...57,200,202 		JBrowse link
G Tbc1d2 TBC1 domain family, member 2 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 5:60,884,114...60,931,717
Ensembl chr 5:60,884,124...60,931,352 		JBrowse link
G Tbc1d20 TBC1 domain family, member 20 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121 		JBrowse link
G Tbc1d21 TBC1 domain family, member 21 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711 		JBrowse link
G Tbc1d22a TBC1 domain family, member 22a NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 7:117,292,481...117,577,473
Ensembl chr 7:117,292,631...117,577,483 		JBrowse link
G Tbc1d22b TBC1 domain family, member 22B NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr20:7,619,096...7,675,232
Ensembl chr20:7,619,240...7,675,231 		JBrowse link
G Tbc1d24 TBC1 domain family, member 24 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050 		JBrowse link
G Tbc1d2b TBC1 domain family, member 2B NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 8:90,746,220...90,814,867
Ensembl chr 8:90,746,233...90,814,832 		JBrowse link
G Tbc1d5 TBC1 domain family, member 5 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 9:3,503,328...4,017,131
Ensembl chr 9:3,513,623...4,016,913 		JBrowse link
G Tbc1d8 TBC1 domain family, member 8 NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr 9:41,651,394...41,761,432
Ensembl chr 9:41,651,395...41,761,409 		JBrowse link
G Tbc1d9b TBC1 domain family member 9B NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr10:34,459,930...34,497,146
Ensembl chr10:34,459,953...34,497,145 		JBrowse link
G Usp6nl USP6 N-terminal like NOT|involved_in ISO (PMID:17646400) RGD PMID:17646400 NCBI chr17:71,828,433...71,956,878
Ensembl chr17:71,830,469...71,956,027 		JBrowse link
regulation of extracellular exosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:24105262) RGD PMID:24105262 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Stam signal transducing adaptor molecule involved_in ISO (PMID:24105262) RGD PMID:24105262 NCBI chr17:77,120,235...77,166,173
Ensembl chr17:77,120,158...77,166,467 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO
IEA		 (PMID:24105262)
GO_REF:0000107		 RGD
Ensembl		 PMID:24105262 GO_REF:0000107 NCBI chr 1:97,412,689...97,442,589
Ensembl chr 1:97,410,848...97,442,554 		JBrowse link
regulation of kinetochore assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf4 ring finger protein 4 involved_in ISO
IEA
ISS		 (PMID:20212317)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20212317 GO_REF:0000024 GO_REF:0000107 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Senp6 SUMO specific peptidase 6 involved_in ISO
IBA		 (PMID:20212317)
GO_REF:0000033		 RGD
GO_Central		 PMID:20212317 GO_REF:0000033 NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170 		JBrowse link
G Trappc12 trafficking protein particle complex subunit 12 involved_in ISO (PMID:25918224) RGD PMID:25918224 NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952 		JBrowse link
regulation of mitotic spindle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccsap centriole, cilia and spindle-associated protein involved_in ISO
IBA		 (PMID:26562023)
GO_REF:0000033		 RGD
GO_Central		 PMID:26562023 GO_REF:0000033 NCBI chr19:51,824,954...51,843,469
Ensembl chr19:51,826,994...51,842,753 		JBrowse link
G Cep97 centrosomal protein 97 involved_in ISO (PMID:17719545) RGD PMID:17719545 NCBI chr11:44,683,503...44,711,471
Ensembl chr11:44,683,506...44,711,471 		JBrowse link
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr18:60,740,349...60,742,879 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr 1:73,660,045...73,662,894
Ensembl chr 1:73,660,046...73,662,452 		JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr11:3,337,478...3,364,015
Ensembl chr11:3,337,494...3,385,181 		JBrowse link
G Chmp3 charged multivesicular body protein 3 NOT|involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr 4:103,576,453...103,622,566
Ensembl chr 4:103,576,515...103,623,959 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr 3:143,170,859...143,211,376
Ensembl chr 3:143,170,902...143,210,844 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA
ISO		 GO_REF:0000107
(PMID:20616062)		 Ensembl
RGD		 PMID:20616062 GO_REF:0000107 NCBI chr 2:91,391,729...91,428,652
Ensembl chr 2:91,388,530...91,428,668 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr10:105,191,972...105,197,642
Ensembl chr10:105,191,950...105,197,640 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr15:44,790,983...44,806,216
Ensembl chr15:44,790,996...44,806,216 		JBrowse link
G Drg1 developmentally regulated GTP binding protein 1 involved_in ISO (PMID:28855639) RGD PMID:28855639 NCBI chr14:78,103,876...78,119,976
Ensembl chr14:78,103,876...78,119,953 		JBrowse link
G Eml3 EMAP like 3 involved_in ISO (PMID:30723163) RGD PMID:30723163 NCBI chr 1:205,826,354...205,837,790
Ensembl chr 1:205,817,378...205,837,807 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000118
GO_REF:0000024
(PMID:21242313)		 Ensembl
TreeGrafter
UniProt
RGD		 PMID:21242313 GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO
IBA
ISS		 (PMID:27137183)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:27137183 GO_REF:0000024 GO_REF:0000033 NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227 		JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO
IBA
ISS		 (PMID:27137183)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:27137183 GO_REF:0000024 GO_REF:0000033 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
Ensembl chr20:3,856,006...3,873,240 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein NOT|involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO
IEA		 (PMID:22621898)
GO_REF:0000107		 RGD
Ensembl		 PMID:22621898 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (PMID:27556504) RGD PMID:27556504 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:19273613)		 UniProt
GO_Central
TreeGrafter
Ensembl
RGD		 PMID:19273613 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:20616062) RGD PMID:20616062 NCBI chr13:22,907,105...22,932,200
Ensembl chr13:22,907,109...22,932,229 		JBrowse link
regulation of non-motile cilium assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (PMID:17519557) RGD PMID:17519557 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
regulation of podosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsn gelsolin involved_in ISO
IEA		 (PMID:24236012)
GO_REF:0000107		 RGD
Ensembl		 PMID:24236012 GO_REF:0000107 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in ISO
IEA
ISS		 (PMID:15998323)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15998323 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:141,571,587...141,614,696
Ensembl chr 3:141,571,587...141,614,693 		JBrowse link
G Kif9 kinesin family member 9 involved_in ISO (PMID:21119006) RGD PMID:21119006 NCBI chr 8:110,459,467...110,504,492
Ensembl chr 8:110,459,383...110,505,252 		JBrowse link
regulation of postsynaptic density assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in IMP PMID:22485184 ARUK-UCL PMID:22485184 RGD:42721990 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Caskin1 CASK interacting protein 1 involved_in ISO (PMID:31727973) RGD PMID:31727973 NCBI chr10:13,512,684...13,533,380
Ensembl chr10:13,513,465...13,533,377 		JBrowse link
G Cbln1 cerebellin 1 precursor involved_in ISO (PMID:20395510) RGD PMID:20395510 NCBI chr19:19,608,763...19,612,572
Ensembl chr19:19,608,716...19,612,572 		JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP
IDA		 PMID:10570482 SynGO PMID:10570482 PMID:10570482 RGD:8554363, RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 involved_in ISO (PMID:20395510) RGD PMID:20395510 NCBI chr 4:92,415,019...93,892,472
Ensembl chr 4:92,415,230...93,889,355 		JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:22357843)		 Ensembl
RGD		 PMID:22357843 GO_REF:0000107 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530 		JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IMP
IDA
EXP		 PMID:29317530 SynGO PMID:29317530 PMID:29317530 PMID:29317530 RGD:405650325, RGD:405650325, RGD:405650325 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 involved_in IMP
IDA		 PMID:16630835 SynGO PMID:16630835 PMID:16630835 RGD:13702351, RGD:13702351 NCBI chr 1:83,742,442...83,761,450
Ensembl chr 1:83,682,964...83,761,449 		JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO		 GO_REF:0000033
(PMID:20410109)		 GO_Central
RGD		 PMID:20410109 GO_REF:0000033 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861 		JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA		 PMID:19252495
GO_REF:0000033		 GO_Central PMID:19252495 PMID:19252495 GO_REF:0000033, RGD:13702321, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263 		JBrowse link
G LRRTM1 leucine rich repeat transmembrane neuronal 1 involved_in IMP
IDA		 PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr 4:109,701,815...109,718,924
Ensembl chr 4:109,701,815...109,717,184 		JBrowse link
G Lrrtm2 leucine rich repeat transmembrane neuronal 2 involved_in IDA
IMP		 PMID:19285470 SynGO PMID:19285470 PMID:19285470 RGD:8554788, RGD:8554788 NCBI chr18:26,817,816...26,822,864
Ensembl chr18:26,817,816...26,822,864 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (PMID:32324534) RGD PMID:32324534 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Nrxn1 neurexin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:21410790)		 Ensembl
RGD		 PMID:21410790 GO_REF:0000107 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO (PMID:34613779) RGD PMID:34613779 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Prickle2 prickle planar cell polarity protein 2 involved_in ISO (PMID:23711981), (PMID:34613779) RGD PMID:23711981 PMID:34613779 NCBI chr 4:124,869,655...125,214,862
Ensembl chr 4:124,869,552...125,214,824 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO (PMID:28555636) RGD PMID:28555636 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in EXP
ISO
IDA		 PMID:29024665
(PMID:22357843)		 RGD PMID:22357843 PMID:29024665 PMID:29024665 RGD:13702141, RGD:13702141 NCBI chr 5:90,046,993...90,698,977
NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396 		JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
ISO
IEA
IMP
EXP		 PMID:21262467
(PMID:21262467)
GO_REF:0000107		 RGD
Ensembl		 PMID:21262467 PMID:21262467 PMID:21262467 PMID:21262467 GO_REF:0000107, RGD:13702219, RGD:13702219, RGD:13702219 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947 		JBrowse link
G Sipa1l1 signal-induced proliferation-associated 1 like 1 involved_in IMP
IDA		 PMID:11502259 SynGO PMID:11502259 PMID:11502259 RGD:8554032, RGD:8554032 NCBI chr 6:101,839,351...102,118,408
Ensembl chr 6:101,839,404...102,116,950 		JBrowse link
regulation of postsynaptic specialization assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in IDA
EXP
IMP		 PMID:20220006 SynGO PMID:20220006 PMID:20220006 PMID:20220006 RGD:8693579, RGD:8693579, RGD:8693579 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065 		JBrowse link
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 involved_in IBA
ISO		 GO_REF:0000033
(PMID:17690689)		 GO_Central
RGD		 PMID:17690689 GO_REF:0000033 NCBI chr  X:59,919,560...60,077,538
Ensembl chr  X:59,920,870...60,077,513 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 involved_in IDA
IMP		 PMID:23839781 SynGO PMID:23839781 PMID:23839781 RGD:405650375, RGD:405650375 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839 		JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 involved_in IDA
IMP		 PMID:23839781 SynGO PMID:23839781 PMID:23839781 RGD:405650375, RGD:405650375 NCBI chr 3:168,265,893...168,275,071
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Gap43 growth associated protein 43 involved_in IDA
IMP		 PMID:25755278 SynGO PMID:25755278 PMID:25755278 RGD:13702431, RGD:13702431 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045 		JBrowse link
G Nptxr neuronal pentraxin receptor involved_in ISO (PMID:27986928) RGD PMID:27986928 NCBI chr 7:111,336,660...111,354,737
Ensembl chr 7:111,336,664...111,354,802 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:15620359) RGD PMID:15620359 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:28576936)		 Ensembl
RGD		 PMID:28576936 GO_REF:0000107 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283 		JBrowse link
G Wnt5a Wnt family member 5A involved_in IDA
IEP
IMP		 PMID:19332546 SynGO PMID:19332546 PMID:19332546 PMID:19332546 RGD:155230776, RGD:155230776, RGD:155230776 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
regulation of spindle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf4 ring finger protein 4 involved_in ISO
IEA
ISS		 (PMID:20212317)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:20212317 GO_REF:0000024 GO_REF:0000107 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566 		JBrowse link
G Senp6 SUMO specific peptidase 6 involved_in ISO
IBA		 (PMID:20212317)
GO_REF:0000033		 RGD
GO_Central		 PMID:20212317 GO_REF:0000033 NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170 		JBrowse link
regulation of stress granule assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO UniProtKB:Q8BRK8 (MGI:6148443|PMID:27430620) RGD PMID:27430620 MGI:6148443 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q5EG47 (MGI:6148443|PMID:27430620)		 Ensembl
RGD		 PMID:27430620 GO_REF:0000107 MGI:6148443 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    cellular process 18812
      regulation of cellular process 12748
        regulation of cellular component biogenesis 1176
          regulation of organelle assembly 276
            negative regulation of organelle assembly + 49
            positive regulation of organelle assembly + 102
            regulation of autophagosome assembly + 46
            regulation of bacterial-type flagellum assembly + 0
            regulation of cardiac myofibril assembly + 1
            regulation of cellulosome assembly + 0
            regulation of centriole replication + 23
            regulation of cilium assembly + 107
            regulation of cytoplasmic mRNA processing body assembly + 8
            regulation of extracellular exosome assembly + 6
            regulation of gut granule assembly + 0
            regulation of kinetochore assembly + 3
            regulation of podosome assembly + 18
            regulation of postsynaptic specialization assembly + 29
            regulation of pseudohyphal septin ring assembly + 0
            regulation of spindle assembly + 29
            regulation of stress granule assembly + 12
Path 2
Term Annotations click to browse term
  biological_process 20413
    cellular process 18812
      cellular component organization or biogenesis 7290
        cellular component organization 6980
          organelle organization 3887
            regulation of organelle organization 1278
              regulation of organelle assembly 276
                negative regulation of organelle assembly + 49
                positive regulation of organelle assembly + 102
                regulation of autophagosome assembly + 46
                regulation of bacterial-type flagellum assembly + 0
                regulation of cardiac myofibril assembly + 1
                regulation of cellulosome assembly + 0
                regulation of centriole replication + 23
                regulation of cilium assembly + 107
                regulation of cytoplasmic mRNA processing body assembly + 8
                regulation of extracellular exosome assembly + 6
                regulation of gut granule assembly + 0
                regulation of kinetochore assembly + 3
                regulation of podosome assembly + 18
                regulation of postsynaptic specialization assembly + 29
                regulation of pseudohyphal septin ring assembly + 0
                regulation of spindle assembly + 29
                regulation of stress granule assembly + 12
paths to the root