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ONTOLOGY REPORT - ANNOTATIONS

Term:fatty acid transmembrane transport
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Accession:GO:1902001 term browser browse the term
Definition:The process in which a fatty acid is transported across a membrane.


show annotations for term's descendants           Sort by:
carnitine shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpt1b carnitine palmitoyltransferase 1B involved_in ISO
IEA		 MGI:3617815 (PMID:18023382)
GO_REF:0000107		 RGD
Ensembl		 PMID:18023382 GO_REF:0000107 NCBI chr 7:122,370,974...122,380,473
Ensembl chr 7:120,491,354...120,500,404 		JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISO
IEA		 MGI:5819280 (PMID:28916721)
GO_REF:0000107		 RGD
Ensembl		 PMID:28916721 GO_REF:0000107 NCBI chr 5:127,893,450...127,911,347
Ensembl chr 5:122,664,677...122,682,095 		JBrowse link
G Slc25a20 solute carrier family 25 member 20 involved_in ISO
IEA		 (PMID:24969106)
GO_REF:0000107		 RGD
Ensembl		 PMID:24969106 GO_REF:0000107 NCBI chr 8:118,243,573...118,265,027
Ensembl chr 8:109,365,002...109,386,512 		JBrowse link
long-chain fatty acid import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc1 ATP binding cassette subfamily C member 1 IDA leukotriene LTC4 transport RGD PMID:12867490 RGD:2303048 NCBI chr10:1,022,041...1,162,431
Ensembl chr10:531,812...655,114 		JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:24503477) RGD PMID:24503477 NCBI chr 4:18,209,088...18,302,142
Ensembl chr 4:17,354,466...17,513,903 		JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in ISO
IEA		 (PMID:28035674)
GO_REF:0000107		 RGD
Ensembl		 PMID:28035674 GO_REF:0000107 NCBI chr16:18,311,859...18,337,024
Ensembl chr16:18,278,984...18,296,063 		JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO
IEA		 MGI:3757682 (PMID:16618416)
GO_REF:0000107		 RGD
Ensembl		 PMID:16618416 GO_REF:0000107 NCBI chr 1:82,688,742...82,699,335
Ensembl chr 1:73,616,564...73,627,172 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 involved_in ISO
IEA		 (PMID:10227690)
GO_REF:0000107		 RGD
Ensembl		 PMID:10227690 GO_REF:0000107 NCBI chr 5:138,002,522...138,030,742
Ensembl chr 5:132,717,196...132,745,416 		JBrowse link
long-chain fatty acid import into peroxisome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
IEA
IBA
ISS		 UniProtKB:P34230 (PMID:18757502)
GO_REF:0000002
GO_REF:0000033
GO_REF:0000024		 RGD
InterPro
GO_Central
UniProt		 PMID:18757502 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:156,579,669...156,601,448
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:124,142,597...124,191,202
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in TAS
ISO
ISS
IEA
IBA		 (PMID:24333844)
GO_REF:0000024
GO_REF:0000002
GO_REF:0000033
GO_REF:0000107		 RGD
UniProt
InterPro
GO_Central
Ensembl		 PMID:24333844 PMID:11883951 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:1358265 NCBI chr 2:212,536,791...212,590,379
Ensembl chr 2:209,852,087...209,906,020 		JBrowse link
negative regulation of long-chain fatty acid import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:82,883,547...82,933,817 		JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO
IEA		 (PMID:16814735)
GO_REF:0000107		 RGD
Ensembl		 PMID:16814735 GO_REF:0000107 NCBI chr16:85,190,310...85,214,543
Ensembl chr16:78,485,045...78,512,482 		JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO
IEA		 (PMID:17416590)
GO_REF:0000107		 RGD
Ensembl		 PMID:17416590 GO_REF:0000107 NCBI chr 3:125,510,250...125,525,402
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
positive regulation of long-chain fatty acid import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in IDA PMID:24503477 ARUK-UCL PMID:24503477 RGD:39458020 NCBI chr16:52,487,870...52,554,110
Ensembl chr16:45,755,254...45,821,541 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16263710 GO_REF:0000033, RGD:2312807 NCBI chr 1:264,294,851...264,341,943
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 IMP RGD PMID:15655248 RGD:2312811 NCBI chr10:38,940,668...38,999,515
Ensembl chr10:38,440,080...38,498,757 		JBrowse link
propanoate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc5a8 solute carrier family 5 member 8 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA		 (PMID:14966140), (PMID:15090606), (PMID:16729224), (PMID:17526579)
GO_REF:0000107
(PMID:15322102)
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:14966140 PMID:15090606 PMID:15322102 PMID:16729224 PMID:17526579 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:25,160,280...25,201,185
Ensembl chr 7:23,272,427...23,314,642 		JBrowse link
short-chain fatty acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a25 solute carrier family 22, member 25 involved_in ISO (PMID:17393504) RGD PMID:17393504 NCBI chr 1:214,767,837...214,956,535
Ensembl chr 1:205,338,699...205,433,085 		JBrowse link
G Slc5a8 solute carrier family 5 member 8 acts_upstream_of_or_within ISO
IEA		 (PMID:15322102)
GO_REF:0000107		 RGD
Ensembl		 PMID:15322102 GO_REF:0000107 NCBI chr 7:25,160,280...25,201,185
Ensembl chr 7:23,272,427...23,314,642 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      transmembrane transport 1734
        organic acid transmembrane transport 173
          carboxylic acid transmembrane transport 169
            fatty acid transmembrane transport 20
              carnitine shuttle 3
              long-chain fatty acid import across plasma membrane + 12
              long-chain fatty acid import into peroxisome 3
              short-chain fatty acid transmembrane transport + 2
Path 2
Term Annotations click to browse term
  biological_process 20567
    localization 5739
      establishment of localization 5084
        transport 4772
          organic acid transport 404
            carboxylic acid transport 402
              monocarboxylic acid transport 202
                fatty acid transport 135
                  fatty acid transmembrane transport 20
                    carnitine shuttle 3
                    long-chain fatty acid import across plasma membrane + 12
                    long-chain fatty acid import into peroxisome 3
                    short-chain fatty acid transmembrane transport + 2
paths to the root